Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G048300 Carya illinoinensis HOM05D007477 ORTHO05D009428 8.3e-108 393.7 192 100.0
Cfa014979 Carpinus fangiana HOM05D007477 ORTHO05D009428 2.0e-77 292.7 191 80.6
QL03p033890 Quercus lobata HOM05D007477 ORTHO05D009428 1.2e-74 283.5 187 77.0
Dinv28044 Davidia involucrata HOM05D007477 ORTHO05D009428 5.5e-67 258.1 190 69.5
GSVIVG01011707001 Vitis vinifera HOM05D007477 ORTHO05D009428 1.5e-64 250.0 190 67.9
Prupe.1G330000 Prunus persica HOM05D007477 ORTHO05D009428 3.3e-64 248.8 192 65.6
Duzib251G0266 Durio zibethinus HOM05D007477 ORTHO05D009428 4.3e-64 248.4 192 66.7
Cpa.g.sc1084.2 Carica papaya HOM05D007477 ORTHO05D009428 6.3e-63 244.6 194 68.6
Haze_10942 Corylus avellana HOM05D007477 ORTHO05D009428 2.0e-61 239.6 190 70.0
Thecc.02G287400 Theobroma cacao HOM05D007477 ORTHO05D009428 7.6e-61 237.7 194 65.5
Lalb_Chr07g0187731 Lupinus albus HOM05D007477 ORTHO05D009428 2.2e-60 236.1 195 63.6
Gohir.A03G118700 Gossypium hirsutum HOM05D007477 ORTHO05D009428 9.4e-59 230.7 193 60.6
Gohir.D02G141700 Gossypium hirsutum HOM05D007477 ORTHO05D009428 1.0e-57 227.3 192 59.4
Lj4g0016169 Lotus japonicus HOM05D007477 ORTHO05D009428 2.3e-57 226.1 194 63.4
CANSAT01G0728 Cannabis sativa HOM05D007477 ORTHO05D009428 8.8e-57 224.2 188 60.6
RcHm_v2.0_Chr4g0443591 Rosa chinensis HOM05D007477 ORTHO05D009428 7.4e-56 221.1 192 60.4
Sed0009759 Sechium edule HOM05D007477 ORTHO05D009428 2.8e-55 219.2 194 61.3
DCAR_023590 Daucus carota HOM05D007477 ORTHO05D009428 4.8e-55 218.4 190 62.1
Manes.15G131100 Manihot esculenta HOM05D007477 ORTHO05D009428 6.3e-55 218.0 190 62.6
Glyma.05G139800 Glycine max HOM05D007477 ORTHO05D009428 4.1e-54 215.3 193 59.6
Actinidia36649 Actinidia chinensis HOM05D007477 ORTHO05D009428 1.5e-53 213.4 186 63.4
Gorai.005G159500 Gossypium raimondii HOM05D007477 ORTHO05D009428 1.0e-52 210.7 182 58.8
Lj3A866T67 Lonicera japonica HOM05D007477 ORTHO05D009428 1.0e-52 210.7 190 58.9
PGR004G1414 Punica granatum HOM05D007477 ORTHO05D009428 1.0e-52 210.7 136 74.3
ECA233G5235 Erigeron canadensis HOM05D007477 ORTHO05D009428 1.3e-52 210.3 190 60.0
Potri.010G110400 Populus trichocarpa HOM05D007477 ORTHO05D009428 3.8e-52 208.8 190 61.1
Phvul.002G183200 Phaseolus vulgaris HOM05D007477 ORTHO05D009428 5.0e-52 208.4 190 57.9
TWI74G0372 Tripterygium wilfordii HOM05D007477 ORTHO05D009428 6.5e-52 208.0 192 59.4
Nn4g24250 Nelumbo nucifera HOM05D007477 ORTHO05D009428 1.1e-51 207.2 173 60.1
Eucgr.G02161 Eucalyptus grandis HOM05D007477 ORTHO05D009428 1.4e-51 206.8 177 60.5
Actinidia12373 Actinidia chinensis HOM05D007477 ORTHO05D009428 1.9e-51 206.5 154 66.2
HanXRQChr12g0363541 Helianthus annuus HOM05D007477 ORTHO05D009428 2.5e-51 206.1 209 56.0
Lsat_1_v5_gn_8_44241 Lactuca sativa HOM05D007477 ORTHO05D009428 2.5e-51 206.1 193 57.5
CsaV3_5G028340 Cucumis sativus L. HOM05D005212 ORTHO05D006353 4.2e-51 205.3 188 60.6
Psat7g082600 Pisum sativum HOM05D007477 ORTHO05D009428 9.4e-51 204.1 198 58.6
FAN17G0828 Fragaria x ananassa HOM05D007477 ORTHO05D009428 2.1e-50 203.0 193 56.5
Ciclev10016822m.g Citrus clementina HOM05D007477 ORTHO05D009428 1.0e-49 200.7 194 57.7
BcaC08g46513 Brassica carinata HOM05D007477 ORTHO05D009428 1.4e-49 200.3 164 58.5
MELO3C005297.2 Cucumis melo HOM05D007477 ORTHO05D009428 1.4e-49 200.3 131 74.8
BcaB05g24610 Brassica carinata HOM05D007477 ORTHO05D009428 1.8e-49 199.9 188 52.1
Cc11_g08270 Coffea canephora HOM05D007477 ORTHO05D009428 1.8e-49 199.9 181 60.2
Rhsim09G0093900 Rhododendron simsii HOM05D007477 ORTHO05D009428 1.8e-49 199.9 179 62.6
VMungo0251G0485 Vigna mungo HOM05D007477 ORTHO05D009428 1.8e-49 199.9 190 54.2
arahy.Tifrunner.gnm1.ann1.4G9RAC Arachis hypogaea HOM05D007477 ORTHO05D009428 2.3e-49 199.5 197 57.9
arahy.Tifrunner.gnm1.ann1.KUTA9A Arachis hypogaea HOM05D007477 ORTHO05D009428 2.3e-49 199.5 197 57.9
BcaC03g15231 Brassica carinata HOM05D007477 ORTHO05D009428 2.3e-49 199.5 188 53.7
A07p37160 Brassica napus HOM05D007477 ORTHO05D009428 2.3e-49 199.5 164 57.9
C02p28170 Brassica napus HOM05D007477 ORTHO05D009428 2.3e-49 199.5 188 53.7
BolC2t08861H Brassica oleracea HOM05D007477 ORTHO05D009428 2.3e-49 199.5 188 53.7
BraA02t06739Z Brassica rapa HOM05D007477 ORTHO05D009428 3.0e-49 199.1 188 53.2
Sp5g25940 Schrenkiella parvula HOM05D007477 ORTHO05D009428 3.9e-49 198.7 172 56.4
Thhalv10019160m.g Eutrema salsugineum HOM05D007477 ORTHO05D009428 5.1e-49 198.4 183 54.1
THA.LOC104823000 Tarenaya hassleriana HOM05D007477 ORTHO05D009428 5.1e-49 198.4 132 65.9
C06p44830 Brassica napus HOM05D007477 ORTHO05D009428 1.1e-48 197.2 164 57.9
BolC6t39542H Brassica oleracea HOM05D007477 ORTHO05D009428 1.1e-48 197.2 164 57.9
BraA07t31278Z Brassica rapa HOM05D007477 ORTHO05D009428 1.1e-48 197.2 164 57.3
FAN07G0335 Fragaria x ananassa HOM05D007477 ORTHO05D009428 1.5e-48 196.8 193 55.4
Peaxi162Scf00376g00125 Petunia axillaris HOM05D007477 ORTHO05D009428 2.0e-48 196.4 193 56.5
MSTRG.7617 Avicennia marina HOM05D007477 ORTHO05D009428 2.6e-48 196.1 193 57.0
MBI12_g05373_MAGBIO Magnolia biondii HOM05D007477 ORTHO05D009428 2.6e-48 196.1 176 59.7
AL2G30200 Arabidopsis lyrata HOM05D007477 ORTHO05D009428 3.3e-48 195.7 192 54.2
A02p16850 Brassica napus HOM05D007477 ORTHO05D009428 3.3e-48 195.7 188 52.7
CARHR064020 Cardamine hirsuta HOM05D007477 ORTHO05D009428 7.4e-48 194.5 134 64.9
Sopen05g023010 Solanum pennellii HOM05D007477 ORTHO05D002065 9.7e-48 194.1 167 59.3
Aa31LG4G10230 Aethionema arabicum HOM05D007477 ORTHO05D009428 1.3e-47 193.7 189 51.3
FvH4_4g34090 Fragaria vesca HOM05D007477 ORTHO05D009428 1.3e-47 193.7 193 54.4
Solyc05g026550.3 Solanum lycopersicum HOM05D007477 ORTHO05D009428 1.7e-47 193.4 167 58.7
Migut.L00398 Erythranthe guttata HOM05D007477 ORTHO05D009428 3.7e-47 192.2 193 56.0
Nitab4.5_0002473g0010 Nicotiana tabacum HOM05D007477 ORTHO05D009428 3.7e-47 192.2 185 58.4
AT1G70760 Arabidopsis thaliana HOM05D007477 ORTHO05D009428 4.8e-47 191.8 192 53.1
unitig_26.g9564 Utricularia gibba HOM05D000544 ORTHO05D009428 4.8e-47 191.8 195 55.4
FAN12G2365 Fragaria x ananassa HOM05D007477 ORTHO05D009428 6.3e-47 191.4 193 53.9
SalBow8G0293 Salvia bowleyana HOM05D007477 ORTHO05D009428 6.3e-47 191.4 186 55.9
Ca_11592_v3 Cicer arietinum L. HOM05D007477 ORTHO05D009428 8.2e-47 191.0 199 53.8
Atru.chr11.654 Acer truncatum HOM05D007477 ORTHO05D009428 1.4e-46 190.3 192 54.2
PGSC0003DMG400015900 Solanum tuberosum HOM05D007477 ORTHO05D009428 1.4e-46 190.3 135 68.1
Carub.0002s1750 Capsella rubella HOM05D007477 ORTHO05D009428 1.8e-46 189.9 133 63.2
Nitab4.5_0003022g0050 Nicotiana tabacum HOM05D007477 ORTHO05D009428 4.1e-46 188.7 185 57.8
AUR62014194 Chenopodium quinoa HOM05D007477 ORTHO05D009428 7.7e-45 184.5 197 52.3
vmacro10662 Vaccinium macrocarpon HOM05D007477 ORTHO05D009428 7.7e-45 184.5 181 59.1
CAN.G439.27 Capsicum annuum HOM05D007477 ORTHO05D009428 3.9e-41 172.2 130 66.9
CDE05G1013 Ceratophyllum demersum HOM05D007477 ORTHO05D009428 8.8e-41 171.0 113 74.3
Aqoxy3G00052 Aquilegia oxysepala HOM05D007477 ORTHO05D009428 1.5e-40 170.2 183 54.1
PSO478G2137 Papaver somniferum HOM05D007477 ORTHO05D009428 2.0e-40 169.9 169 53.8
Glyma.08G095100 Glycine max HOM05D007477 ORTHO05D009428 5.7e-40 168.3 192 52.1
EL10Ac9g22714 Beta vulgaris HOM05D007477 ORTHO05D009428 2.6e-37 159.5 191 47.6
ClCG01G006330 Citrullus lanatus HOM05D007477 ORTHO05D009428 1.0e-36 157.5 195 48.7
MD16G1022900 Malus domestica HOM05D007477 ORTHO05D009428 1.1e-35 154.1 143 60.1
Zm00001eb312390 Zea mays HOM05D007477 ORTHO05D009428 1.3e-31 140.6 177 45.2
ATR0564G098 Amborella trichopoda HOM05D007477 ORTHO05D009428 1.1e-30 137.5 123 55.3
Ah.01g007630 Amaranthus hybridus HOM05D007477 ORTHO05D009428 2.4e-30 136.3 135 54.8
Zm00001eb099410 Zea mays HOM05D007477 ORTHO05D009428 2.0e-29 133.3 125 50.4
MD13G1021900 Malus domestica HOM05D007477 ORTHO05D009428 2.5e-27 126.3 102 66.7
FAN22G0194 Fragaria x ananassa HOM05D007477 ORTHO05D009428 4.1e-22 109.0 193 38.3
Os05g0348100 Oryza sativa ssp. japonica HOM05D007477 ORTHO05D009428 4.5e-21 105.5 79 55.7
SEGI_14142 Sequoiadendron giganteum HOM05D007477 ORTHO05D009428 3.8e-20 102.4 111 50.5
Sabra10G0080700 Salix brachista HOM05D007477 ORTHO05D009428 4.0e-17 92.4 111 53.2
COL.COLO4_13101 Corchorus olitorius HOM05D007477 ORTHO05D009428 8.9e-17 91.3 118 50.0
AUR62039526 Chenopodium quinoa HOM05D007477 ORTHO05D009428 2.2e-15 86.7 198 34.3
Mapoly0003s0200 Marchantia polymorpha HOM05D007477 ORTHO05D009428 1.8e-14 83.6 97 47.4
Pp3c24_18490 Physcomitrium patens HOM05D007477 ORTHO05D009428 5.4e-14 82.0 67 59.7
TAR622G1153 Trochodendron aralioides HOM05D007477 ORTHO05D009428 1.6e-13 80.5 61 68.9
AagrBONN_evm.TU.Sc2ySwM_344.2533 Anthoceros agrestis HOM05D007477 ORTHO05D009428 8.9e-09 64.7 59 50.8
SEGI_21620 Sequoiadendron giganteum HOM05D002696 ORTHO05D009428 2.0e-08 63.5 87 43.7


User provided reference genes

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