Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G041500 Carya illinoinensis HOM05D008618 ORTHO05D010393 3.8e-38 161.0 80 100.0
CiPaw.02G048200 Carya illinoinensis HOM05D008618 ORTHO05D010393 1.3e-33 146.0 74 93.2
Haze_00293 Corylus avellana HOM05D008618 ORTHO05D010393 5.1e-19 97.4 74 66.2
QL09p007223 Quercus lobata HOM05D008618 ORTHO05D010393 7.4e-18 93.6 74 62.2
Dinv29214 Davidia involucrata HOM05D008618 ORTHO05D010393 1.3e-17 92.8 74 58.1
Cfa016164 Carpinus fangiana HOM05D008618 ORTHO05D010393 3.7e-17 91.3 74 64.9
Hma1.2p1_0094F.1_g047330 Hydrangea macrophylla HOM05D008618 ORTHO05D010393 1.3e-14 82.8 74 55.4
Hma1.2p1_0094F.1_g047336 Hydrangea macrophylla HOM05D008618 ORTHO05D010393 1.3e-14 82.8 74 55.4
vmacro06440 Vaccinium macrocarpon HOM05D008618 ORTHO05D010393 5.0e-14 80.9 74 52.7
Nn3g18880 Nelumbo nucifera HOM05D008618 ORTHO05D010393 2.5e-13 78.6 75 49.3
TAR623G0439 Trochodendron aralioides HOM05D008618 ORTHO05D010393 9.4e-13 76.6 76 50.0
Thecc.03G208200 Theobroma cacao HOM05D008618 ORTHO05D010393 1.2e-12 76.3 75 52.0
TAR623G0113 Trochodendron aralioides HOM05D008618 ORTHO05D010393 2.1e-12 75.5 76 48.7
TAR629G1218 Trochodendron aralioides HOM05D008618 ORTHO05D010393 2.7e-12 75.1 77 49.4
Lalb_Chr11g0067381 Lupinus albus HOM05D008618 ORTHO05D010393 4.7e-12 74.3 74 51.4
Sabra15G0003400 Salix brachista HOM05D008618 ORTHO05D010393 4.7e-12 74.3 74 54.1
Actinidia34266 Actinidia chinensis HOM05D008618 ORTHO05D010393 1.4e-11 72.8 77 50.6
Oeu061027.1 Olea europaea HOM05D008618 ORTHO05D010393 1.8e-11 72.4 74 51.4
Rhsim03G0215100 Rhododendron simsii HOM05D008618 ORTHO05D010393 2.3e-11 72.0 74 45.9
Manes.01G042900 Manihot esculenta HOM05D008618 ORTHO05D010393 3.0e-11 71.6 74 54.1
MD07G1298600 Malus domestica HOM05D008618 ORTHO05D010393 5.2e-11 70.9 70 54.3
Aqoxy7G00591 Aquilegia oxysepala HOM05D008618 ORTHO05D010393 8.8e-11 70.1 74 44.6
RcHm_v2.0_Chr1g0382821 Rosa chinensis HOM05D008618 ORTHO05D010393 2.0e-10 68.9 78 51.3
VMungo1309G1433 Vigna mungo HOM05D008618 ORTHO05D010393 2.0e-10 68.9 74 47.3
Gohir.D12G247300 Gossypium hirsutum HOM05D008618 ORTHO05D010393 3.3e-10 68.2 75 45.3
Glyma.06G136100 Glycine max HOM05D008618 ORTHO05D010393 5.7e-10 67.4 76 46.1
Potri.012G021500 Populus trichocarpa HOM05D008618 ORTHO05D010393 9.7e-10 66.6 74 51.4
FvH4_7g32870 Fragaria vesca HOM05D008618 ORTHO05D010393 1.3e-09 66.2 76 52.6
FAN10G0741 Fragaria x ananassa HOM05D008618 ORTHO05D010393 1.3e-09 66.2 76 52.6
FAN10G2254 Fragaria x ananassa HOM05D008618 ORTHO05D010393 1.3e-09 66.2 76 52.6
Gohir.A12G246600 Gossypium hirsutum HOM05D008618 ORTHO05D010393 1.3e-09 66.2 75 45.3
Gorai.008G265300 Gossypium raimondii HOM05D008618 ORTHO05D010393 1.3e-09 66.2 75 45.3
GSVIVG01038639001 Vitis vinifera HOM05D008618 ORTHO05D010393 2.8e-09 65.1 82 42.7
COL.COLO4_14366 Corchorus olitorius HOM05D008618 ORTHO05D010393 6.3e-09 63.9 74 48.6
Phvul.009G045500 Phaseolus vulgaris HOM05D008618 ORTHO05D010393 8.2e-09 63.5 74 44.6
Glyma.04G228750 Glycine max HOM05D008618 ORTHO05D010393 1.1e-08 63.2 76 44.7
Medtr3g092635 Medicago truncatula HOM05D008618 ORTHO05D010393 2.4e-08 62.0 74 41.9
TPR.G33651 Trifolium pratense HOM05D012788 ORTHO05D010393 2.4e-08 62.0 75 44.0
CSS0019591 Camellia sinensis var. sinensis HOM05D008618 ORTHO05D010393 7.0e-08 60.5 77 46.8
arahy.Tifrunner.gnm1.ann1.4T36ZR Arachis hypogaea HOM05D012788 ORTHO05D010393 2.9e-06 55.1 77 39.0
arahy.Tifrunner.gnm1.ann1.5C4YCE Arachis hypogaea HOM05D012788 ORTHO05D010393 2.9e-06 55.1 77 39.0
arahy.Tifrunner.gnm1.ann1.87KBHK Arachis hypogaea HOM05D012788 ORTHO05D010393 2.9e-06 55.1 77 39.0
arahy.Tifrunner.gnm1.ann1.9LPP9E Arachis hypogaea HOM05D012788 ORTHO05D010393 2.9e-06 55.1 77 39.0
arahy.Tifrunner.gnm1.ann1.B8BFDM Arachis hypogaea HOM05D012788 ORTHO05D010393 2.9e-06 55.1 77 39.0
arahy.Tifrunner.gnm1.ann1.FHB2RT Arachis hypogaea HOM05D012788 ORTHO05D010393 2.9e-06 55.1 77 39.0
arahy.Tifrunner.gnm1.ann1.M7I6G5 Arachis hypogaea HOM05D012788 ORTHO05D010393 2.9e-06 55.1 77 39.0
arahy.Tifrunner.gnm1.ann1.PIR49E Arachis hypogaea HOM05D012788 ORTHO05D010393 2.9e-06 55.1 77 39.0
SalBow2G1999 Salvia bowleyana HOM05D008618 ORTHO05D010393 2.9e-06 55.1 90 36.7
arahy.Tifrunner.gnm1.ann1.MVIT3T Arachis hypogaea HOM05D012788 ORTHO05D010393 3.8e-06 54.7 77 39.0
MBI12_g34834_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 5.0e-06 54.3 75 34.7
Psat5g072120 Pisum sativum HOM05D012788 ORTHO05D010393 6.5e-06 53.9 74 39.2
arahy.Tifrunner.gnm1.ann1.G57NNM Arachis hypogaea HOM05D012788 ORTHO05D010393 8.5e-06 53.5 77 37.7
MBI12_g02805_MAGBIO Magnolia biondii HOM05D008618 ORTHO05D010393 8.5e-06 53.5 75 34.7


User provided reference genes

Program Settings