Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G035200 Carya illinoinensis HOM05D004457 ORTHO05D005282 2.5e-181 638.6 323 100.0
CiPaw.06G035100 Carya illinoinensis HOM05D004457 ORTHO05D005282 5.1e-150 534.6 323 85.4
CiPaw.05G214800 Carya illinoinensis HOM05D004457 ORTHO05D005282 7.4e-141 504.2 330 79.1
Thecc.05G219000 Theobroma cacao HOM05D004457 ORTHO05D005282 1.8e-139 499.6 323 78.6
Cfa016064 Carpinus fangiana HOM05D004457 ORTHO05D005282 7.6e-138 494.2 323 77.7
Haze_00385 Corylus avellana HOM05D004457 ORTHO05D005282 6.5e-137 491.1 323 77.4
Prupe.2G328100 Prunus persica HOM05D004457 ORTHO05D005282 2.5e-136 489.2 324 75.3
Potri.013G079101 Populus trichocarpa HOM05D004457 ORTHO05D005282 5.5e-136 488.0 324 77.5
TWI60G0869 Tripterygium wilfordii HOM05D004457 ORTHO05D005282 5.5e-136 488.0 323 74.9
MD07G1310300 Malus domestica HOM05D004457 ORTHO05D005282 2.7e-135 485.7 326 74.8
PGR142G0056 Punica granatum HOM05D004457 ORTHO05D005282 4.6e-135 485.0 324 73.5
Manes.09G128300 Manihot esculenta HOM05D004457 ORTHO05D005282 7.9e-135 484.2 324 76.2
COL.COLO4_15192 Corchorus olitorius HOM05D004457 ORTHO05D005282 1.8e-134 483.0 324 75.3
GSVIVG01024347001 Vitis vinifera HOM05D004457 ORTHO05D005282 2.5e-133 479.2 323 74.0
Atru.chr12.1918 Acer truncatum HOM05D004457 ORTHO05D005282 3.7e-132 475.3 323 74.9
Potri.013G079201 Populus trichocarpa HOM05D004457 ORTHO05D005282 6.3e-132 474.6 324 75.9
RcHm_v2.0_Chr1g0384491 Rosa chinensis HOM05D004457 ORTHO05D005282 8.2e-132 474.2 325 73.5
MD01G1237700 Malus domestica HOM05D004457 ORTHO05D005282 3.1e-131 472.2 326 73.3
Cpa.g.sc43.116 Carica papaya HOM05D004457 ORTHO05D005282 5.3e-131 471.5 323 73.1
CSS0048555 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 1.0e-129 467.2 323 73.7
Actinidia34324 Actinidia chinensis HOM05D004457 ORTHO05D005282 2.9e-129 465.7 323 72.1
Glyma.11G009300 Glycine max HOM05D004457 ORTHO05D005282 1.4e-128 463.4 323 70.3
arahy.Tifrunner.gnm1.ann1.R5JYMV Arachis hypogaea HOM05D004457 ORTHO05D005282 1.9e-128 463.0 324 70.1
FvH4_7g34140 Fragaria vesca HOM05D004457 ORTHO05D005282 1.9e-128 463.0 325 71.7
Glyma.01G233500 Glycine max HOM05D004457 ORTHO05D005282 2.5e-128 462.6 323 70.9
arahy.Tifrunner.gnm1.ann1.9FAL4E Arachis hypogaea HOM05D004457 ORTHO05D005282 7.2e-128 461.1 324 69.8
Actinidia08758 Actinidia chinensis HOM05D004457 ORTHO05D005282 1.2e-127 460.3 325 72.0
Ciclev10021193m.g Citrus clementina HOM05D004457 ORTHO05D005282 1.2e-127 460.3 323 72.8
Nn6g33553 Nelumbo nucifera HOM05D004457 ORTHO05D005282 1.6e-127 459.9 323 71.5
Hma1.2p1_0419F.1_g149440 Hydrangea macrophylla HOM05D004457 ORTHO05D005282 6.1e-127 458.0 363 64.5
Eucgr.K00073 Eucalyptus grandis HOM05D004457 ORTHO05D005282 1.8e-126 456.4 327 70.6
Phvul.002G041000 Phaseolus vulgaris HOM05D004457 ORTHO05D005282 2.5e-125 452.6 323 69.3
TAR375G0461 Trochodendron aralioides HOM05D004457 ORTHO05D005282 2.5e-125 452.6 323 72.1
CSS0037309 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 3.3e-125 452.2 323 71.5
CSS0045385 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 3.7e-124 448.7 323 71.2
FAN10G1543 Fragaria x ananassa HOM05D004457 ORTHO05D005282 3.7e-124 448.7 338 68.3
Gorai.003G055700 Gossypium raimondii HOM05D004457 ORTHO05D005282 1.8e-123 446.4 324 70.7
CSS0031792 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 3.1e-123 445.7 306 73.5
Gohir.D03G053500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 5.3e-123 444.9 324 70.7
Lj3A885T46 Lonicera japonica HOM05D004457 ORTHO05D005282 5.3e-123 444.9 328 68.6
Gohir.A02G127500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 3.4e-122 442.2 324 70.4
Gohir.D08G241200 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.0e-121 440.7 324 69.1
Gohir.A08G221660 Gossypium hirsutum HOM05D004457 ORTHO05D005282 2.9e-121 439.1 324 69.1
VMungo1215G3184 Vigna mungo HOM05D004457 ORTHO05D005282 2.9e-121 439.1 323 67.2
AL2G19640 Arabidopsis lyrata HOM05D004457 ORTHO05D005282 1.1e-120 437.2 323 70.3
EL10Ac3g05054 Beta vulgaris HOM05D004457 ORTHO05D005282 1.4e-120 436.8 323 66.9
Gorai.004G256600 Gossypium raimondii HOM05D004457 ORTHO05D005282 1.9e-120 436.4 324 68.8
Lalb_Chr09g0320121 Lupinus albus HOM05D004457 ORTHO05D005282 1.9e-120 436.4 324 67.0
Aqoxy3G02297 Aquilegia oxysepala HOM05D004457 ORTHO05D005282 3.2e-120 435.6 324 68.2
AT1G65020 Arabidopsis thaliana HOM05D004457 ORTHO05D005282 5.5e-120 434.9 323 70.3
Cc02_g00170 Coffea canephora HOM05D004457 ORTHO05D005282 1.6e-119 433.3 338 65.7
AUR62028201 Chenopodium quinoa HOM05D004457 ORTHO05D005282 2.1e-119 433.0 323 66.3
Ca_24434_v3 Cicer arietinum L. HOM05D004457 ORTHO05D005282 3.6e-119 432.2 323 65.3
Sabra13G0073500 Salix brachista HOM05D004457 ORTHO05D005282 7.9e-119 431.0 306 72.9
ClCG09G017170 Citrullus lanatus HOM05D004457 ORTHO05D005282 2.3e-118 429.5 326 69.6
LjContig00222g0016666 Lotus japonicus HOM05D004457 ORTHO05D005282 6.7e-118 427.9 324 67.0
THA.LOC104805712 Tarenaya hassleriana HOM05D004457 ORTHO05D005282 6.7e-118 427.9 325 68.9
Medtr5g007360 Medicago truncatula HOM05D004457 ORTHO05D005282 8.8e-118 427.6 323 64.4
Sp5g19410 Schrenkiella parvula HOM05D004457 ORTHO05D005282 3.3e-117 425.6 323 67.2
Psat2g189240 Pisum sativum HOM05D004457 ORTHO05D005282 7.4e-117 424.5 324 64.5
Sed0007489 Sechium edule HOM05D004457 ORTHO05D005282 7.4e-117 424.5 323 66.6
PSO063G5530 Papaver somniferum HOM05D004457 ORTHO05D005282 4.8e-116 421.8 323 65.3
Rhsim03G0223200 Rhododendron simsii HOM05D004457 ORTHO05D005282 4.8e-116 421.8 379 58.6
CsaV3_2G036630 Cucumis sativus L. HOM05D004457 ORTHO05D005282 8.2e-116 421.0 325 67.1
PSO782G5560 Papaver somniferum HOM05D004457 ORTHO05D005282 1.1e-115 420.6 323 65.3
CiPaw.06G035000 Carya illinoinensis HOM05D004457 ORTHO05D005282 1.4e-115 420.2 286 78.0
Carub.0002s1019 Capsella rubella HOM05D004457 ORTHO05D005282 3.1e-115 419.1 324 68.2
vmacro06531 Vaccinium macrocarpon HOM05D004457 ORTHO05D005282 6.9e-115 417.9 392 57.9
CsaV3_3G050090 Cucumis sativus L. HOM05D004457 ORTHO05D005282 1.2e-114 417.2 323 66.9
Nitab4.5_0004530g0100 Nicotiana tabacum HOM05D004457 ORTHO05D005282 2.0e-114 416.4 323 65.6
Hund21100 Selenicereus undatus HOM05D004457 ORTHO05D005282 2.0e-114 416.4 323 65.0
Oeu062823.1 Olea europaea HOM05D004457 ORTHO05D005282 1.0e-113 414.1 326 65.0
BraA07t30901Z Brassica rapa HOM05D004457 ORTHO05D005282 1.7e-113 413.3 323 66.3
Thhalv10022467m.g Eutrema salsugineum HOM05D004457 ORTHO05D005282 1.7e-113 413.3 323 66.6
C06p38960 Brassica napus HOM05D004457 ORTHO05D005282 1.9e-112 409.8 324 66.0
BolC6t38988H Brassica oleracea HOM05D004457 ORTHO05D005282 1.9e-112 409.8 324 66.0
Aa31LG2G2220 Aethionema arabicum HOM05D004457 ORTHO05D005282 2.5e-112 409.5 341 63.0
BraA02t06354Z Brassica rapa HOM05D004457 ORTHO05D005282 2.5e-112 409.5 333 64.0
Solyc03g097180.3 Solanum lycopersicum HOM05D004457 ORTHO05D005282 3.2e-112 409.1 323 64.1
BcaB05g25319 Brassica carinata HOM05D004457 ORTHO05D005282 9.4e-112 407.5 324 64.5
Lsat_1_v5_gn_8_3720 Lactuca sativa HOM05D004457 ORTHO05D005282 9.4e-112 407.5 324 65.4
BolC2t08250H Brassica oleracea HOM05D004457 ORTHO05D005282 2.1e-111 406.4 333 63.1
TPR.G37899 Trifolium pratense HOM05D004457 ORTHO05D005282 1.4e-110 403.7 364 57.7
PGSC0003DMG400003162 Solanum tuberosum HOM05D004457 ORTHO05D005282 2.3e-110 402.9 323 62.8
C02p21100 Brassica napus HOM05D004457 ORTHO05D005282 8.8e-110 401.0 349 59.9
Peaxi162Scf00516g00661 Petunia axillaris HOM05D004457 ORTHO05D005282 5.7e-109 398.3 323 64.4
Sc13g0010930 Simmondsia chinensis HOM05D004457 ORTHO05D005282 9.7e-109 397.5 308 65.3
A02p12980 Brassica napus HOM05D004457 ORTHO05D005282 4.8e-108 395.2 359 59.3
A07p32750 Brassica napus HOM05D004457 ORTHO05D005282 4.1e-107 392.1 368 58.7
CAN.G1131.28 Capsicum annuum HOM05D004457 ORTHO05D005282 5.3e-107 391.7 308 64.0
HanXRQChr04g0105271 Helianthus annuus HOM05D004457 ORTHO05D005282 1.2e-106 390.6 326 62.9
FAN28G1138 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.6e-106 390.2 327 64.2
Nitab4.5_0000021g0740 Nicotiana tabacum HOM05D004457 ORTHO05D005282 2.6e-106 389.4 314 63.7
MELO3C021859.2 Cucumis melo HOM05D004457 ORTHO05D005282 4.5e-106 388.7 285 70.2
Peaxi162Scf00133g00612 Petunia axillaris HOM05D004457 ORTHO05D005282 5.2e-102 375.2 323 61.0
SGA_v2.0_scaffold50G18449 Striga asiatica HOM05D004457 ORTHO05D005282 8.8e-102 374.4 362 55.0
SalBow2G1767 Salvia bowleyana HOM05D004457 ORTHO05D005282 5.7e-101 371.7 326 58.6
Migut.F00082 Erythranthe guttata HOM05D004457 ORTHO05D005282 4.8e-100 368.6 326 58.3
MSTRG.8 Avicennia marina HOM05D004457 ORTHO05D005282 5.3e-99 365.2 326 56.4
MSTRG.26922 Avicennia marina HOM05D004457 ORTHO05D005282 1.2e-98 364.0 327 57.8
Duzib106G1483 Durio zibethinus HOM05D004457 ORTHO05D005282 1.2e-98 364.0 323 61.3
SalBow4G0372 Salvia bowleyana HOM05D004457 ORTHO05D005282 1.2e-98 364.0 326 59.2
PSO541G4777 Papaver somniferum HOM05D004457 ORTHO05D005282 3.5e-98 362.5 362 54.7
Lj1A1034G49 Lonicera japonica HOM05D004457 ORTHO05D005282 5.9e-98 361.7 249 73.1
SalBow4G0893 Salvia bowleyana HOM05D004457 ORTHO05D005282 1.0e-97 360.9 326 58.6
unitig_90.g27538 Utricularia gibba HOM05D004457 ORTHO05D005282 3.8e-97 359.0 326 58.0
QL09p022526 Quercus lobata HOM05D004457 ORTHO05D005282 4.2e-96 355.5 309 60.8
Oeu015511.1 Olea europaea HOM05D004457 ORTHO05D005282 2.1e-95 353.2 324 58.3
FAN01G1413 Fragaria x ananassa HOM05D004457 ORTHO05D005282 4.0e-94 349.0 306 61.8
Nitab4.5_0004268g0020 Nicotiana tabacum HOM05D004457 ORTHO05D005282 2.6e-93 346.3 267 63.7
ATR0665G122 Amborella trichopoda HOM05D004457 ORTHO05D005282 5.7e-93 345.1 323 53.9
Zm00001eb024890 Zea mays HOM05D004457 ORTHO05D005282 1.7e-92 343.6 329 52.9
SGA_v2.0_scaffold44G16903 Striga asiatica HOM05D004457 ORTHO05D005282 1.1e-91 340.9 346 53.2
HPP92_001524 Vanilla planifolia HOM05D004457 ORTHO05D005282 5.0e-89 332.0 324 51.2
Actinidia28413 Actinidia chinensis HOM05D004457 ORTHO05D005282 3.2e-88 329.3 234 69.7
Cfa016063 Carpinus fangiana HOM05D004457 ORTHO05D005282 1.5e-85 320.5 326 59.2
Cfa016062 Carpinus fangiana HOM05D004457 ORTHO05D005282 2.6e-85 319.7 294 62.6
Haze_00386 Corylus avellana HOM05D004457 ORTHO05D005282 3.4e-77 292.7 288 58.7
FAN25G0067 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.4e-75 287.3 328 53.7
PSO675G5198 Papaver somniferum HOM05D004457 ORTHO05D005282 4.1e-75 285.8 261 57.9
SEGI_39651 Sequoiadendron giganteum HOM05D004457 ORTHO05D005282 5.0e-73 278.9 323 45.5
Sed0022448 Sechium edule HOM05D004457 ORTHO05D005282 6.6e-73 278.5 210 69.5
CARHR056470 Cardamine hirsuta HOM05D004457 ORTHO05D005282 1.2e-71 274.2 210 68.6
Hund09804 Selenicereus undatus HOM05D004457 ORTHO05D005282 1.4e-70 270.8 308 50.0
FAN03G1923 Fragaria x ananassa HOM05D004457 ORTHO05D005282 7.5e-69 265.0 170 77.1
AUR62002084 Chenopodium quinoa HOM05D004457 ORTHO05D005282 1.1e-67 261.2 323 48.3
CDE02G1044 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 1.9e-67 260.4 247 52.2
Dinv29138 Davidia involucrata HOM05D004457 ORTHO05D005282 7.1e-59 231.9 145 82.1
ClCG09G013130 Citrullus lanatus HOM05D004457 ORTHO05D005282 2.8e-55 219.9 174 64.9
Nitab4.5_0000338g0060 Nicotiana tabacum HOM05D004457 ORTHO05D005282 7.6e-53 211.8 164 67.1
ECA233G5338 Erigeron canadensis HOM05D004457 ORTHO05D005282 2.9e-52 209.9 165 66.7
Sopen03g027920 Solanum pennellii HOM05D004457 ORTHO05D005282 1.6e-50 204.1 145 71.7
Gohir.A08G097750 Gossypium hirsutum HOM05D004457 ORTHO05D005282 3.5e-50 203.0 257 46.3
ClCG09G013110 Citrullus lanatus HOM05D004457 ORTHO05D005282 2.8e-47 193.4 150 62.7
BolC4t27312H Brassica oleracea HOM05D004457 ORTHO05D005282 8.1e-47 191.8 163 61.3
Dinv29137 Davidia involucrata HOM05D004457 ORTHO05D005282 9.9e-45 184.9 127 71.7
Mapoly0043s0014 Marchantia polymorpha HOM05D004457 ORTHO05D005282 2.3e-41 173.7 317 36.3
Pp3c11_5580 Physcomitrium patens HOM05D004457 ORTHO05D005282 3.9e-41 172.9 319 37.9
Migut.F00937 Erythranthe guttata HOM05D004457 ORTHO05D005282 1.5e-37 161.0 151 53.6
BcaC02g08145 Brassica carinata HOM05D004457 ORTHO05D005282 2.1e-34 150.6 121 62.0
AagrBONN_evm.TU.Sc2ySwM_228.2639 Anthoceros agrestis HOM05D004457 ORTHO05D005282 6.0e-34 149.1 217 36.9
SMO364G0318 Selaginella moellendorffii HOM05D004457 ORTHO05D005282 1.0e-33 148.3 218 36.7
Pp3c10_23490 Physcomitrium patens HOM05D004457 ORTHO05D005282 4.3e-32 142.9 322 32.3
DCAR_020421 Daucus carota HOM05D004457 ORTHO05D005282 1.6e-31 141.0 83 81.9
Sopen03g027940 Solanum pennellii HOM05D004457 ORTHO05D005282 7.6e-29 132.1 119 52.1
ECA233G2641 Erigeron canadensis HOM05D004457 ORTHO05D005282 1.7e-28 131.0 120 58.3
Nitab4.5_0000845g0010 Nicotiana tabacum HOM05D004457 ORTHO05D005282 2.5e-24 117.1 120 54.2
Medtr3g091660 Medicago truncatula HOM05D004457 ORTHO05D005282 9.0e-22 108.6 105 51.4
RcHm_v2.0_Chr7g0241921 Rosa chinensis HOM05D004457 ORTHO05D005282 1.1e-19 101.7 96 59.4
C07p33100 Brassica napus HOM05D004457 ORTHO05D005282 2.1e-18 97.4 74 60.8
MELO3C003309.2 Cucumis melo HOM05D004457 ORTHO05D005282 2.1e-18 97.4 86 62.8
BcaC06g34068 Brassica carinata HOM05D004457 ORTHO05D005282 4.6e-18 96.3 74 60.8
BolC9t54837H Brassica oleracea HOM05D004457 ORTHO05D005282 4.6e-18 96.3 74 60.8
Gohir.A08G102425 Gossypium hirsutum HOM05D004457 ORTHO05D005282 5.1e-17 92.8 66 66.7
arahy.Tifrunner.gnm1.ann1.383HND Arachis hypogaea HOM05D004457 ORTHO05D005282 2.2e-15 87.4 61 72.1
CDE02G4136 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 2.2e-15 87.4 77 55.8
QL09p022513 Quercus lobata HOM05D004457 ORTHO05D005282 9.0e-14 82.0 58 72.4
Medtr3g091670 Medicago truncatula HOM05D004457 ORTHO05D005282 2.7e-10 70.5 61 62.3
QL03p072618 Quercus lobata HOM05D000132 ORTHO05D000058 3.6e-10 70.1 54 74.1
arahy.Tifrunner.gnm1.ann1.G80LMI Arachis hypogaea HOM05D004457 ORTHO05D082520 2.5e-08 63.9 54 61.1


User provided reference genes

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