Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 6.7e-162 573.9 285 100.0
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 8.2e-128 460.7 277 81.6
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 7.7e-126 454.1 275 81.1
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.3e-120 436.8 271 78.6
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.3e-120 436.8 271 78.6
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 2.2e-120 436.0 346 66.2
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 1.6e-118 429.9 272 76.5
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 1.6e-118 429.9 265 78.5
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 3.5e-118 428.7 268 77.2
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 5.9e-118 427.9 268 78.4
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 1.0e-117 427.2 270 76.3
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 1.0e-117 427.2 276 76.1
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 2.9e-117 425.6 262 79.0
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 2.5e-116 422.5 261 78.5
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 5.5e-116 421.4 268 76.5
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 1.2e-115 420.2 272 75.4
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 8.9e-114 414.1 278 73.0
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 1.2e-113 413.7 264 76.5
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 4.4e-113 411.8 263 77.9
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 5.7e-113 411.4 266 77.4
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.3e-112 410.2 275 72.7
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 1.1e-111 407.1 263 75.3
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 1.4e-111 406.8 266 76.7
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 3.1e-111 405.6 273 73.6
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 3.1e-111 405.6 268 74.3
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 9.2e-111 404.1 269 72.5
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.2e-110 403.7 268 75.0
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 2.7e-110 402.5 271 71.6
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 1.0e-109 400.6 269 72.9
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.3e-109 399.4 269 72.9
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 5.0e-109 398.3 269 73.2
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 5.0e-109 398.3 269 73.2
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 6.6e-109 397.9 262 73.3
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 1.2e-107 393.7 247 75.7
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 1.6e-107 393.3 275 71.3
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 2.1e-107 392.9 286 69.9
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 8.0e-107 391.0 278 69.4
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.0e-106 390.6 276 69.2
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 1.0e-106 390.6 270 70.4
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 1.4e-106 390.2 276 69.6
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 4.0e-106 388.7 270 71.1
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 5.2e-106 388.3 276 69.2
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.2e-105 387.1 272 68.8
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 1.2e-105 387.1 272 69.9
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 2.0e-105 386.3 274 70.8
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 2.6e-105 386.0 268 68.7
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 2.6e-105 386.0 267 69.7
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 7.5e-105 384.4 268 68.3
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 1.7e-104 383.3 269 72.9
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 2.9e-104 382.5 280 68.2
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 2.9e-104 382.5 280 68.2
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 2.9e-104 382.5 276 68.5
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 8.3e-104 380.9 268 68.3
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 1.4e-103 380.2 273 69.2
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 1.4e-103 380.2 273 69.2
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 2.4e-103 379.4 273 69.2
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 2.4e-103 379.4 273 71.1
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 2.4e-103 379.4 273 71.1
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 7.0e-103 377.9 271 68.6
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 2.0e-102 376.3 271 71.6
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 2.0e-102 376.3 265 70.9
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 6.0e-102 374.8 275 67.3
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 1.7e-101 373.2 275 67.6
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 3.0e-101 372.5 264 70.8
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 5.0e-101 371.7 279 65.6
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 6.6e-101 371.3 280 65.4
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 8.6e-101 370.9 272 69.5
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 1.1e-100 370.5 268 70.1
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 7.3e-100 367.9 273 64.5
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 3.6e-99 365.5 265 67.2
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 2.3e-98 362.8 264 69.3
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 3.1e-98 362.5 260 70.4
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 3.1e-98 362.5 263 70.0
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 2.0e-97 359.8 259 68.7
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 2.6e-97 359.4 283 68.2
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 4.4e-97 358.6 283 67.1
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 9.8e-97 357.5 274 67.2
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 3.7e-96 355.5 259 67.6
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 1.9e-95 353.2 256 71.9
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 7.0e-95 351.3 276 67.4
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 7.0e-95 351.3 276 67.4
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 2.7e-94 349.4 258 65.1
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 7.8e-94 347.8 273 65.2
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 1.7e-93 346.7 257 67.7
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 2.3e-93 346.3 276 66.3
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 9.5e-92 340.9 276 65.9
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 2.3e-90 336.3 272 60.7
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 3.1e-90 335.9 272 65.1
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 9.9e-81 304.3 266 60.2
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 1.9e-76 290.0 186 75.3
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 8.1e-75 284.6 192 70.8
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.2e-73 280.8 179 75.4
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 5.4e-71 271.9 183 70.5
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 1.2e-70 270.8 169 75.1
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 2.0e-65 253.4 171 71.3
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 3.4e-65 252.7 179 69.3
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 1.3e-61 240.7 175 68.6
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 3.0e-61 239.6 268 49.3
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 9.6e-60 234.6 277 48.7
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 1.8e-58 230.3 267 46.1
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.8e-58 230.3 135 77.0
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 4.9e-56 222.2 158 65.2
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 2.1e-54 216.9 274 46.0
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 1.1e-47 194.5 270 45.2
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 3.2e-47 193.0 223 48.4
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 3.2e-47 193.0 264 43.9
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 5.3e-42 175.6 272 42.6
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.0e-33 147.1 132 59.8
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 5.7e-28 129.0 78 75.6
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 1.7e-27 127.5 85 67.1
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 4.1e-26 122.9 275 34.2
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 1.3e-24 117.9 164 41.5
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 9.7e-20 101.7 74 66.2
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 6.3e-19 99.0 174 39.7
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 3.1e-18 96.7 74 64.9
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.7e-16 90.9 65 64.6
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 7.2e-15 85.5 130 41.5
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 2.0e-12 77.4 63 63.5
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 6.5e-08 62.4 75 44.0


User provided reference genes

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