Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 2.6e-130 468.8 248 100.0
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 4.1e-99 365.2 247 77.7
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 1.2e-87 327.0 243 74.9
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 1.7e-76 290.0 236 64.0
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 6.4e-76 288.1 240 65.8
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 1.9e-75 286.6 234 66.2
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 5.4e-75 285.0 236 64.0
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 7.8e-74 281.2 232 65.9
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 6.6e-73 278.1 241 66.0
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 1.5e-72 276.9 235 66.0
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 1.2e-71 273.9 193 74.1
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.2e-71 273.9 244 63.5
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 1.6e-71 273.5 244 63.5
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 3.6e-71 272.3 245 63.3
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 3.6e-71 272.3 245 63.3
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.4e-70 270.4 244 62.3
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.4e-70 270.4 244 62.3
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 8.9e-70 267.7 235 60.9
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 1.2e-69 267.3 253 58.9
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 3.4e-69 265.8 240 62.5
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 1.7e-65 253.4 242 59.1
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 2.3e-65 253.1 200 72.0
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 3.0e-65 252.7 209 64.1
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 1.5e-64 250.4 205 65.9
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 2.1e-63 246.5 248 58.5
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 1.1e-62 244.2 237 59.1
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 4.0e-62 242.3 239 59.0
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 5.2e-62 241.9 244 56.1
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 1.2e-61 240.7 238 58.4
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 4.4e-61 238.8 240 59.2
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 7.6e-61 238.0 246 58.5
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 1.7e-60 236.9 200 67.5
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 2.9e-60 236.1 260 55.0
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 3.8e-60 235.7 244 57.8
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 4.9e-60 235.3 243 53.5
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 4.9e-60 235.3 244 54.9
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 1.4e-59 233.8 229 59.0
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 1.9e-59 233.4 276 52.2
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 2.4e-59 233.0 237 55.7
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 1.2e-58 230.7 250 55.6
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 1.2e-58 230.7 250 55.6
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 1.2e-58 230.7 192 66.7
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 1.6e-58 230.3 217 59.9
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 2.1e-58 229.9 228 59.2
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 3.5e-58 229.2 237 57.8
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 6.0e-58 228.4 227 59.5
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 1.0e-57 227.6 224 58.5
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 1.7e-57 226.9 238 57.6
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 1.7e-57 226.9 227 59.5
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 3.9e-57 225.7 242 57.0
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 5.1e-57 225.3 257 53.7
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 5.1e-57 225.3 223 56.5
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 1.9e-56 223.4 252 54.4
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 2.5e-56 223.0 239 56.9
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 9.6e-56 221.1 276 51.4
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 9.6e-56 221.1 209 62.7
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 1.6e-55 220.3 234 57.7
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 2.1e-55 219.9 250 54.0
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 2.1e-55 219.9 235 54.9
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 2.8e-55 219.5 249 51.4
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 8.1e-55 218.0 231 52.4
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 1.1e-54 217.6 241 53.9
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.1e-54 217.6 202 58.9
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 2.4e-54 216.5 181 67.4
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 2.4e-54 216.5 263 54.0
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 6.9e-54 214.9 219 55.7
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 2.0e-53 213.4 291 49.1
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 7.6e-53 211.5 224 56.2
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 2.2e-52 209.9 257 51.8
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 6.4e-52 208.4 193 59.1
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 1.1e-51 207.6 220 53.6
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 1.1e-51 207.6 223 56.5
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 2.4e-51 206.5 213 58.2
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 2.7e-50 203.0 272 49.6
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 3.5e-50 202.6 163 63.8
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 1.0e-49 201.1 205 55.1
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 1.0e-49 201.1 246 50.0
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 1.7e-49 200.3 221 50.7
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 8.7e-49 198.0 193 55.4
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 1.9e-48 196.8 242 48.3
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 3.3e-48 196.1 199 56.8
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 9.6e-48 194.5 199 56.3
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 6.9e-46 188.3 277 46.6
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 6.4e-44 181.8 216 51.4
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 6.4e-44 181.8 167 59.9
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 1.9e-43 180.3 142 64.1
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 4.2e-43 179.1 211 48.8
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 5.4e-43 178.7 274 41.6
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 4.6e-42 175.6 133 66.9
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 6.0e-42 175.3 260 46.9
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 7.9e-42 174.9 260 46.9
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 1.9e-40 170.2 247 46.2
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 2.5e-40 169.9 238 47.1
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 3.7e-39 166.0 126 65.9
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 1.1e-38 164.5 247 45.7
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 1.4e-35 154.1 205 46.8
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 9.3e-35 151.4 147 56.5
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 9.3e-35 151.4 245 41.2
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 2.7e-34 149.8 171 54.4
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 9.6e-32 141.4 250 42.4
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 1.0e-28 131.3 173 48.6
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 7.9e-26 121.7 189 45.5
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 8.7e-25 118.2 105 60.0
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 1.1e-22 111.3 123 49.6
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 2.4e-22 110.2 167 40.7
Hma1.2p1_1235F.1_g269100 Hydrangea macrophylla HOM05D006369 ORTHO05D007764 4.5e-21 105.9 142 48.6
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 1.3e-20 104.4 203 37.4
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 1.7e-20 104.0 181 40.9
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 6.1e-18 95.5 114 54.4
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 3.0e-17 93.2 114 53.5
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 5.7e-16 89.0 174 34.5
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 7.4e-16 88.6 67 65.7
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 4.8e-15 85.9 105 54.3
Sabra19G0056300 Salix brachista HOM05D006369 ORTHO05D007764 8.2e-15 85.1 92 56.5
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 2.2e-12 77.0 50 72.0
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 1.1e-11 74.7 52 67.3
Sabra19G0056100 Salix brachista HOM05D006369 ORTHO05D007764 1.2e-10 71.2 85 47.1
QL10p024490 Quercus lobata HOM05D006369 ORTHO05D007764 3.6e-10 69.7 52 71.2
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 1.8e-09 67.4 132 38.6
A03p08120 Brassica napus HOM05D006369 ORTHO05D007764 1.1e-08 64.7 147 42.2
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 1.1e-08 64.7 44 75.0
PGSC0003DMG402008641 Solanum tuberosum HOM05D006369 ORTHO05D007764 8.2e-07 58.5 44 54.5


User provided reference genes

Program Settings