Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G016700 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.4e-29 132.5 70 100.0
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 6.8e-16 87.0 71 71.8
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 6.8e-16 87.0 71 71.8
QL01p010819 Quercus lobata HOM05D008114 ORTHO05D010089 2.4e-13 78.6 71 66.2
QL93p0145_0019 Quercus lobata HOM05D008114 ORTHO05D010089 4.1e-13 77.8 71 66.2
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 9.5e-10 66.6 70 55.7
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 9.5e-10 66.6 70 55.7
Thecc.02G221900 Theobroma cacao HOM05D008114 ORTHO05D010089 1.6e-09 65.9 70 57.1
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 8.0e-09 63.5 70 52.9
Manes.14G106800 Manihot esculenta HOM05D008114 ORTHO05D010089 1.0e-08 63.2 64 53.1
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.8e-08 62.4 70 52.9
Potri.010G120300 Populus trichocarpa HOM05D008114 ORTHO05D010089 4.0e-08 61.2 68 54.4
COL.COLO4_32149 Corchorus olitorius HOM05D008114 ORTHO05D010089 8.9e-08 60.1 71 50.7
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.5e-07 59.3 63 54.0
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.5e-07 59.3 63 54.0
Gohir.D12G146500 Gossypium hirsutum HOM05D008114 ORTHO05D010089 2.0e-07 58.9 55 63.6
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 2.6e-07 58.5 70 57.1
Gohir.A12G141700 Gossypium hirsutum HOM05D008114 ORTHO05D010089 3.4e-07 58.2 53 64.2
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 3.4e-07 58.2 71 52.1
Cfa015838 Carpinus fangiana HOM05D008114 ORTHO05D010089 4.4e-07 57.8 70 58.6
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 7.5e-07 57.0 69 44.9
Gorai.008G157800 Gossypium raimondii HOM05D008114 ORTHO05D010089 7.5e-07 57.0 55 60.0
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 7.5e-07 57.0 69 47.8
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.3e-06 56.2 69 46.4
FAN17G1195 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.7e-06 55.8 72 48.6
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 2.2e-06 55.5 70 48.6
Lsat_1_v5_gn_8_41420 Lactuca sativa HOM05D008114 ORTHO05D010089 2.9e-06 55.1 70 44.3
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 2.9e-06 55.1 70 45.7
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 4.9e-06 54.3 69 44.9
FAN22G0519 Fragaria x ananassa HOM05D008114 ORTHO05D010089 4.9e-06 54.3 72 47.2
CSS0031808 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 8.3e-06 53.5 70 52.9
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 8.3e-06 53.5 61 49.2


User provided reference genes

Program Settings