Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G012000 Carya illinoinensis HOM05D007874 ORTHO05D009614 4.7e-74 281.2 148 100.0
CiPaw.05G249700 Carya illinoinensis HOM05D007874 ORTHO05D009614 1.3e-36 156.8 155 59.4
Haze_11010 Corylus avellana HOM05D007874 ORTHO05D009614 3.4e-32 142.1 147 62.6
QL01p001738 Quercus lobata HOM05D007874 ORTHO05D009614 2.0e-29 132.9 154 54.5
Ciclev10017051m.g Citrus clementina HOM05D007874 ORTHO05D009614 1.2e-24 117.1 148 49.3
Sabra10G0083200 Salix brachista HOM05D007874 ORTHO05D009614 5.4e-22 108.2 115 51.3
Potri.008G129200 Populus trichocarpa HOM05D007874 ORTHO05D009614 3.3e-19 99.0 124 47.6
CANSAT01G3222 Cannabis sativa HOM05D007874 ORTHO05D009614 2.1e-18 96.3 146 43.2
Cpa.g.sc65.135 Carica papaya HOM05D007874 ORTHO05D009614 1.8e-17 93.2 140 47.1
Thecc.02G281500 Theobroma cacao HOM05D007874 ORTHO05D009614 2.3e-17 92.8 154 44.2
Duzib251G0922 Durio zibethinus HOM05D007874 ORTHO05D009614 5.2e-17 91.7 151 40.4
Manes.17G076900 Manihot esculenta HOM05D007874 ORTHO05D009614 8.9e-17 90.9 128 44.5
Sabra08G0097900 Salix brachista HOM05D007874 ORTHO05D009614 2.0e-16 89.7 128 47.7
Manes.15G127500 Manihot esculenta HOM05D007874 ORTHO05D009614 1.7e-15 86.7 141 45.4
MSTRG.901 Avicennia marina HOM05D007874 ORTHO05D009614 2.9e-15 85.9 123 50.4
Eucgr.G02190 Eucalyptus grandis HOM05D007874 ORTHO05D009614 3.2e-14 82.4 129 40.3
Hma1.2p1_0096F.1_g047930 Hydrangea macrophylla HOM05D007874 ORTHO05D009614 3.2e-14 82.4 145 39.3
PGR102G2496 Punica granatum HOM05D007874 ORTHO05D009614 3.5e-13 79.0 149 38.3
Duzib248G1518 Durio zibethinus HOM05D007874 ORTHO05D009614 4.6e-13 78.6 107 43.9
Psat7g128240 Pisum sativum HOM05D007874 ORTHO05D009614 6.6e-12 74.7 138 34.8
THA.LOC104809191 Tarenaya hassleriana HOM05D007874 ORTHO05D009614 1.5e-11 73.6 129 41.9
Dinv05171 Davidia involucrata HOM05D007874 ORTHO05D009614 1.9e-11 73.2 122 39.3
Gohir.D01G145200 Gossypium hirsutum HOM05D007874 ORTHO05D009614 2.5e-11 72.8 158 38.6
EL10Ac6g14213 Beta vulgaris HOM05D007874 ORTHO05D009614 4.3e-11 72.0 143 37.1
Thhalv10019301m.g Eutrema salsugineum HOM05D007874 ORTHO05D009614 2.1e-10 69.7 146 37.7
Gorai.002G179200 Gossypium raimondii HOM05D007874 ORTHO05D009614 2.8e-10 69.3 156 38.5
MELO3C005324.2 Cucumis melo HOM05D030674 ORTHO05D009614 3.6e-10 68.9 96 46.9
CARHR064260 Cardamine hirsuta HOM05D007874 ORTHO05D009614 4.7e-10 68.6 150 38.0
Potri.010G113100 Populus trichocarpa HOM05D007874 ORTHO05D009614 6.2e-10 68.2 120 41.7
Atru.chr11.536 Acer truncatum HOM05D007874 ORTHO05D009614 1.4e-09 67.0 103 47.6
Aa31LG4G10100 Aethionema arabicum HOM05D007874 ORTHO05D009614 1.8e-09 66.6 93 44.1
Eucgr.B02901 Eucalyptus grandis HOM05D007874 ORTHO05D009614 3.1e-09 65.9 138 37.0
Nitab4.5_0000742g0160 Nicotiana tabacum HOM05D007874 ORTHO05D009614 5.2e-09 65.1 131 35.9
BcaB05g24626 Brassica carinata HOM05D007874 ORTHO05D009614 6.8e-09 64.7 159 34.0
Nitab4.5_0002523g0020 Nicotiana tabacum HOM05D007874 ORTHO05D009614 6.8e-09 64.7 149 34.2
TAR622G1026 Trochodendron aralioides HOM05D032524 ORTHO05D009614 1.5e-08 63.5 113 42.5
Lsat_1_v5_gn_3_54800 Lactuca sativa HOM05D007874 ORTHO05D009614 2.0e-08 63.2 120 37.5
AT1G23050 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 4.4e-08 62.0 153 39.2
Cc11_g08720 Coffea canephora HOM05D007874 ORTHO05D009614 5.8e-08 61.6 120 43.3
Sed0007191 Sechium edule HOM05D007874 ORTHO05D009614 5.8e-08 61.6 146 33.6
Peaxi162Scf00137g00121 Petunia axillaris HOM05D007874 ORTHO05D009614 7.6e-08 61.2 145 34.5
Sp5g26130 Schrenkiella parvula HOM05D007874 ORTHO05D009614 1.7e-07 60.1 161 32.3
DCAR_026776 Daucus carota HOM05D007874 ORTHO05D009614 2.9e-07 59.3 150 34.0
FAN07G2552 Fragaria x ananassa HOM05D020194 ORTHO05D025497 6.4e-07 58.2 115 44.3
Glyma.07G216900 Glycine max HOM05D017162 ORTHO05D009614 6.4e-07 58.2 141 39.7
Peaxi162Scf00159g00054 Petunia axillaris HOM05D007874 ORTHO05D009614 6.4e-07 58.2 136 34.6
QL01p001235 Quercus lobata HOM05D007874 ORTHO05D009614 6.4e-07 58.2 150 42.7
RcHm_v2.0_Chr4g0441281 Rosa chinensis HOM05D020194 ORTHO05D009614 1.4e-06 57.0 159 33.3
TAR630G0003 Trochodendron aralioides HOM05D032524 ORTHO05D009614 1.4e-06 57.0 112 40.2
BcaB03g14859 Brassica carinata HOM05D007874 ORTHO05D009614 1.9e-06 56.6 154 31.2
Rhsim09G0067000 Rhododendron simsii HOM05D007874 ORTHO05D009614 3.2e-06 55.8 152 33.6


User provided reference genes

Program Settings