Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G009800 Carya illinoinensis HOM05D007326 ORTHO05D009048 3.7e-53 211.5 122 100.0
Haze_14278 Corylus avellana HOM05D007326 ORTHO05D009048 1.8e-23 112.8 125 54.4
COL.COLO4_03426 Corchorus olitorius HOM05D007326 ORTHO05D009048 1.4e-20 103.2 119 50.4
Thecc.03G195600 Theobroma cacao HOM05D007326 ORTHO05D009048 7.1e-20 100.9 118 60.2
vmacro06547 Vaccinium macrocarpon HOM05D007326 ORTHO05D009048 2.7e-19 99.0 122 51.6
CSS0025602 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 6.0e-19 97.8 122 58.2
Duzib205G1092 Durio zibethinus HOM05D007326 ORTHO05D009048 7.9e-19 97.4 120 52.5
TWI23G0901 Tripterygium wilfordii HOM05D007326 ORTHO05D009048 5.1e-18 94.7 118 58.5
CSS0006442 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 6.6e-18 94.4 122 57.4
Atru.chr1.147 Acer truncatum HOM05D007326 ORTHO05D009048 2.5e-17 92.4 124 52.4
Rhsim09G0011500 Rhododendron simsii HOM05D007326 ORTHO05D009048 5.6e-17 91.3 128 45.3
Gohir.A11G014200 Gossypium hirsutum HOM05D007326 ORTHO05D009048 2.1e-16 89.4 120 43.3
Gohir.D11G014400 Gossypium hirsutum HOM05D007326 ORTHO05D009048 2.8e-16 89.0 120 43.3
Gorai.007G014800 Gossypium raimondii HOM05D007326 ORTHO05D009048 2.8e-16 89.0 120 43.3
CANSAT21G2203 Cannabis sativa HOM05D007326 ORTHO05D009048 1.1e-15 87.0 122 54.1
TAR629G0302 Trochodendron aralioides HOM05D007326 ORTHO05D009048 3.1e-15 85.5 122 43.4
Dinv29296 Davidia involucrata HOM05D007326 ORTHO05D009048 4.0e-15 85.1 94 61.7
Prupe.2G311900 Prunus persica HOM05D007326 ORTHO05D009048 4.0e-15 85.1 117 50.4
Manes.06G159200 Manihot esculenta HOM05D007326 ORTHO05D009048 9.0e-15 84.0 121 48.8
Ciclev10006260m.g Citrus clementina HOM05D007326 ORTHO05D009048 1.2e-14 83.6 120 46.7
Actinidia06160 Actinidia chinensis HOM05D007326 ORTHO05D009048 1.5e-14 83.2 113 47.8
Hma1.2p1_0538F.1_g174400 Hydrangea macrophylla HOM05D007326 ORTHO05D009048 1.5e-14 83.2 123 53.7
Peaxi162Scf00550g00426 Petunia axillaris HOM05D007326 ORTHO05D009048 4.5e-14 81.6 87 49.4
Potri.015G017700 Populus trichocarpa HOM05D007326 ORTHO05D009048 1.3e-13 80.1 126 44.4
Glyma.09G190100 Glycine max HOM05D007326 ORTHO05D009048 1.7e-13 79.7 90 45.6
Cpa.g.sc3.64 Carica papaya HOM05D007326 ORTHO05D009048 2.2e-13 79.3 125 51.2
VMungo0464G1195 Vigna mungo HOM05D007326 ORTHO05D009048 2.9e-13 79.0 125 38.4
Glyma.07G086800 Glycine max HOM05D007326 ORTHO05D009048 6.4e-13 77.8 98 43.9
Nitab4.5_0002492g0030 Nicotiana tabacum HOM05D007326 ORTHO05D009048 8.4e-13 77.4 123 39.0
Actinidia06159 Actinidia chinensis HOM05D007326 ORTHO05D009048 1.4e-12 76.6 128 46.1
Solyc03g083450.1 Solanum lycopersicum HOM05D007326 ORTHO05D009048 1.4e-12 76.6 125 41.6
SGA_v2.0_scaffold105G30435 Striga asiatica HOM05D007326 ORTHO05D009048 2.4e-12 75.9 93 46.2
Aa31LG1G16060 Aethionema arabicum HOM05D007326 ORTHO05D009048 5.4e-12 74.7 34 91.2
CAN.G108.61 Capsicum annuum HOM05D007326 ORTHO05D009048 5.4e-12 74.7 123 39.8
PGSC0003DMG400009118 Solanum tuberosum HOM05D007326 ORTHO05D009048 5.4e-12 74.7 120 40.8
Eucgr.A01472 Eucalyptus grandis HOM05D007326 ORTHO05D009048 9.3e-12 73.9 123 49.6
Nitab4.5_0000714g0090 Nicotiana tabacum HOM05D007326 ORTHO05D009048 1.2e-11 73.6 93 46.2
ClCG01G000490 Citrullus lanatus HOM05D007326 ORTHO05D009048 1.6e-11 73.2 123 40.7
ECA232G0297 Erigeron canadensis HOM05D007326 ORTHO05D009048 1.6e-11 73.2 93 46.2
Rhsim03G0206100 Rhododendron simsii HOM05D043765 ORTHO05D009048 1.6e-11 73.2 114 43.9
Ca_15635_v3 Cicer arietinum L. HOM05D007326 ORTHO05D009048 3.5e-11 72.0 112 53.6
THA.LOC104819263 Tarenaya hassleriana HOM05D007326 ORTHO05D009048 3.5e-11 72.0 34 88.2
Sc03g0007330 Simmondsia chinensis HOM05D007326 ORTHO05D009048 6.0e-11 71.2 34 82.4
Oeu030278.1 Olea europaea HOM05D007326 ORTHO05D009048 7.9e-11 70.9 125 45.6
SGA_v2.0_scaffold55G19762 Striga asiatica HOM05D007326 ORTHO05D009048 7.9e-11 70.9 122 40.2
QL09p009621 Quercus lobata HOM05D007326 ORTHO05D009048 1.0e-10 70.5 115 45.2
Lj1g0012737 Lotus japonicus HOM05D007326 ORTHO05D009048 1.3e-10 70.1 32 90.6
Nn4g24310 Nelumbo nucifera HOM05D000291 ORTHO05D009048 1.3e-10 70.1 120 38.3
Oeu037093.1 Olea europaea HOM05D007326 ORTHO05D009048 1.3e-10 70.1 124 40.3
Os06g0157800 Oryza sativa ssp. japonica HOM05D007326 ORTHO05D009048 1.3e-10 70.1 34 82.4
AL8G43810 Arabidopsis lyrata HOM05D007326 ORTHO05D009048 1.8e-10 69.7 34 82.4
A06p32910 Brassica napus HOM05D007326 ORTHO05D009048 2.3e-10 69.3 89 56.2
BraA06t26223Z Brassica rapa HOM05D007326 ORTHO05D009048 2.3e-10 69.3 89 56.2
Mapoly0007s0050 Marchantia polymorpha HOM05D007326 ORTHO05D009048 2.3e-10 69.3 34 82.4
Medtr3g109290 Medicago truncatula HOM05D007326 ORTHO05D009048 3.0e-10 68.9 32 87.5
arahy.Tifrunner.gnm1.ann1.8E5M3M Arachis hypogaea HOM05D007326 ORTHO05D009048 3.9e-10 68.6 113 52.2
Sopen03g023220 Solanum pennellii HOM05D007326 ORTHO05D009048 3.9e-10 68.6 124 39.5
Ah.04g150610 Amaranthus hybridus HOM05D007326 ORTHO05D009048 5.1e-10 68.2 34 76.5
ATR0037G036 Amborella trichopoda HOM05D007326 ORTHO05D009048 5.1e-10 68.2 118 39.8
BcaB02g09919 Brassica carinata HOM05D007326 ORTHO05D009048 5.1e-10 68.2 34 79.4
Carub.0008s2698 Capsella rubella HOM05D007326 ORTHO05D009048 5.1e-10 68.2 34 79.4
CARHR280100 Cardamine hirsuta HOM05D007326 ORTHO05D009048 5.1e-10 68.2 34 79.4
CsaV3_5G000570 Cucumis sativus L. HOM05D007326 ORTHO05D009048 5.1e-10 68.2 127 40.9
Zm00001eb376510 Zea mays HOM05D007326 ORTHO05D009048 5.1e-10 68.2 32 90.6
ATR0762G055 Amborella trichopoda HOM05D007326 ORTHO05D009048 8.7e-10 67.4 107 43.9
Aqoxy7G00103 Aquilegia oxysepala HOM05D007326 ORTHO05D009048 8.7e-10 67.4 128 38.3
MBI06_g08457_MAGBIO Magnolia biondii HOM05D007326 ORTHO05D009048 8.7e-10 67.4 125 37.6
TPR.G14875 Trifolium pratense HOM05D007326 ORTHO05D009048 8.7e-10 67.4 114 40.4
PGR042G3637 Punica granatum HOM05D007326 ORTHO05D009048 1.1e-09 67.0 123 38.2
Actinidia06153 Actinidia chinensis HOM05D003276 ORTHO05D003809 1.9e-09 66.2 122 41.8
EL10Ac9g21379 Beta vulgaris HOM05D007326 ORTHO05D009048 1.9e-09 66.2 32 81.2
Thhalv10005175m.g Eutrema salsugineum HOM05D007326 ORTHO05D009048 1.9e-09 66.2 87 57.5
Lsat_1_v5_gn_9_58181 Lactuca sativa HOM05D007326 ORTHO05D009048 1.9e-09 66.2 121 44.6
MSTRG.55 Avicennia marina HOM05D007326 ORTHO05D009048 2.5e-09 65.9 100 42.0
AT5G67490 Arabidopsis thaliana HOM05D007326 ORTHO05D009048 3.3e-09 65.5 91 52.7
C03p59560 Brassica napus HOM05D007326 ORTHO05D009048 3.3e-09 65.5 89 51.7
BolC3t18219H Brassica oleracea HOM05D007326 ORTHO05D009048 3.3e-09 65.5 89 51.7
CDE05G0016 Ceratophyllum demersum HOM05D007326 ORTHO05D009048 3.3e-09 65.5 32 78.1
FAN10G1221 Fragaria x ananassa HOM05D007326 ORTHO05D009048 3.3e-09 65.5 124 40.3
Phvul.004G162900 Phaseolus vulgaris HOM05D007326 ORTHO05D009048 3.3e-09 65.5 30 86.7
Sed0023316 Sechium edule HOM05D007326 ORTHO05D009048 5.6e-09 64.7 123 39.8
SEGI_38766 Sequoiadendron giganteum HOM05D007326 ORTHO05D009048 5.6e-09 64.7 34 76.5
arahy.Tifrunner.gnm1.ann1.SUR8QF Arachis hypogaea HOM05D007326 ORTHO05D009048 9.6e-09 63.9 116 49.1
Nitab4.5_0000714g0080 Nicotiana tabacum HOM05D001433 ORTHO05D009048 9.6e-09 63.9 123 35.0
TPR.G1327 Trifolium pratense HOM05D007326 ORTHO05D009048 9.6e-09 63.9 126 37.3
FAN10G2940 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.6e-08 63.2 124 39.5
MCO04G224 Micromonas commoda HOM05D007326 ORTHO05D009048 2.8e-08 62.4 34 79.4
Psat0s2030g0040 Pisum sativum HOM05D007326 ORTHO05D009048 3.7e-08 62.0 111 45.0
RcHm_v2.0_Chr1g0381021 Rosa chinensis HOM05D007326 ORTHO05D009048 3.7e-08 62.0 116 36.2
AUR62013031 Chenopodium quinoa HOM05D007326 ORTHO05D009048 4.8e-08 61.6 124 43.5
Manes.05G205250 Manihot esculenta HOM05D007326 ORTHO05D009048 6.2e-08 61.2 32 78.1
MELO3C005879.2 Cucumis melo HOM05D007326 ORTHO05D009048 8.1e-08 60.8 122 36.1
Pp3c23_5100 Physcomitrium patens HOM05D007326 ORTHO05D009048 8.1e-08 60.8 32 75.0
Rhsim03G0207100 Rhododendron simsii HOM05D043765 ORTHO05D009048 8.1e-08 60.8 100 42.0
Sp2g29160 Schrenkiella parvula HOM05D007326 ORTHO05D009048 8.1e-08 60.8 113 48.7
unitig_8.g3560 Utricularia gibba HOM05D000146 ORTHO05D000178 8.1e-08 60.8 28 85.7
AUR62010038 Chenopodium quinoa HOM05D007326 ORTHO05D009048 1.8e-07 59.7 125 43.2
TAR375G0672 Trochodendron aralioides HOM05D007326 ORTHO05D009048 3.1e-07 58.9 86 38.4
FAN06G2911 Fragaria x ananassa HOM05D007326 ORTHO05D009048 4.0e-07 58.5 121 36.4
PRCOL_00002099 Prasinoderma coloniale HOM05D007326 ORTHO05D009048 4.0e-07 58.5 33 72.7
FAN03G0879 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.5e-06 56.6 116 37.1
CBR_g41366 Chara braunii HOM05D007326 ORTHO05D009048 2.0e-06 56.2 26 84.6
TAR629G2746 Trochodendron aralioides HOM05D007326 ORTHO05D009048 2.0e-06 56.2 31 74.2


User provided reference genes

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