Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 1.4e-114 416.4 220 100.0
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 2.5e-92 342.4 220 83.6
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 2.1e-91 339.3 223 78.9
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 1.1e-90 337.0 223 77.6
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 3.1e-90 335.5 223 77.1
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 3.4e-89 332.0 219 80.8
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 1.3e-88 330.1 229 76.4
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 8.4e-88 327.4 227 76.7
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 1.1e-87 327.0 232 74.6
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 1.4e-87 326.6 235 75.3
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 7.1e-87 324.3 223 76.7
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 6.0e-86 321.2 225 73.8
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 1.3e-85 320.1 216 78.2
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 1.3e-85 320.1 224 77.2
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 1.9e-84 316.2 230 71.7
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 5.6e-84 314.7 221 75.1
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 3.7e-83 312.0 223 72.2
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 3.7e-83 312.0 223 73.1
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 4.8e-83 311.6 225 73.8
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 6.2e-83 311.2 237 70.9
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 8.1e-83 310.8 233 72.1
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.4e-82 310.1 220 73.2
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 1.4e-82 310.1 223 73.1
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 1.8e-82 309.7 225 74.2
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 3.1e-82 308.9 220 72.7
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.0e-82 308.5 220 72.7
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 5.3e-82 308.1 220 73.2
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 5.3e-82 308.1 220 72.7
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.5e-81 305.1 220 72.3
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 4.5e-81 305.1 225 73.3
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 1.3e-80 303.5 233 70.0
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 2.9e-80 302.4 231 69.3
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 2.9e-80 302.4 225 72.4
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 2.9e-80 302.4 189 83.1
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 8.4e-80 300.8 215 71.6
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 1.1e-79 300.4 220 72.3
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 1.1e-79 300.4 220 70.9
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 2.5e-79 299.3 218 74.3
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 4.2e-79 298.5 209 72.2
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 4.2e-79 298.5 217 72.8
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 5.5e-79 298.1 228 69.3
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 7.1e-79 297.7 220 70.5
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 1.2e-78 297.0 227 71.8
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.6e-78 296.6 209 71.8
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 2.1e-78 296.2 213 72.3
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 2.7e-78 295.8 221 72.9
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 4.6e-78 295.0 230 68.3
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 6.0e-78 294.7 209 71.3
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 6.0e-78 294.7 222 71.6
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 7.9e-78 294.3 213 71.4
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 7.9e-78 294.3 213 71.4
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 1.3e-77 293.5 220 70.9
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 6.7e-77 291.2 196 74.0
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 1.1e-76 290.4 184 79.3
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 2.5e-76 289.3 223 69.5
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 7.4e-76 287.7 200 72.0
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 3.7e-75 285.4 172 84.3
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 6.3e-75 284.6 231 66.2
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 5.3e-74 281.6 221 66.5
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 9.0e-74 280.8 206 70.4
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.5e-73 278.5 220 67.7
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 7.6e-73 277.7 220 66.8
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 1.3e-72 276.9 222 66.7
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 2.9e-72 275.8 214 65.0
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 8.5e-72 274.2 178 77.5
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 5.5e-71 271.6 222 64.9
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 7.2e-71 271.2 214 64.0
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 1.2e-70 270.4 214 64.5
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 1.6e-70 270.0 223 64.1
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 3.6e-70 268.9 195 73.8
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 7.9e-70 267.7 212 65.6
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 1.3e-69 266.9 207 67.6
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 1.3e-69 266.9 219 63.9
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 5.1e-69 265.0 192 71.9
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 8.7e-69 264.2 214 65.0
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 1.1e-68 263.8 212 65.1
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 1.5e-68 263.5 223 63.2
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 1.9e-68 263.1 185 69.7
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 1.9e-68 263.1 204 65.2
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 3.7e-67 258.8 217 62.2
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 4.8e-67 258.5 217 61.8
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 4.8e-67 258.5 217 61.8
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 4.8e-67 258.5 217 61.8
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 6.3e-67 258.1 214 62.1
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 1.4e-66 256.9 220 61.4
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 1.4e-66 256.9 220 61.4
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 4.1e-66 255.4 183 72.1
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 9.0e-66 254.2 216 61.1
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 9.0e-66 254.2 216 61.1
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 2.0e-65 253.1 183 69.4
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 4.5e-65 251.9 201 64.2
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 4.5e-65 251.9 183 71.6
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 1.0e-64 250.8 219 60.7
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 1.3e-64 250.4 220 60.0
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 1.7e-64 250.0 213 58.7
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 1.7e-64 250.0 222 59.9
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 2.2e-64 249.6 191 69.1
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 2.5e-63 246.1 198 66.2
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 7.2e-63 244.6 170 71.8
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 1.4e-61 240.4 199 63.3
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 1.4e-61 240.4 199 63.3
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 1.8e-61 240.0 220 60.9
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 5.1e-61 238.4 157 74.5
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 8.8e-61 237.7 195 62.6
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 2.0e-60 236.5 220 60.5
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 3.3e-60 235.7 157 75.2
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 7.4e-60 234.6 219 58.4
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 9.7e-60 234.2 219 58.4
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 9.7e-60 234.2 219 58.4
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 9.7e-60 234.2 219 57.1
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 6.9e-58 228.0 155 74.2
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 4.5e-57 225.3 155 70.3
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 1.7e-56 223.4 190 57.9
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 2.2e-56 223.0 155 74.2
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 1.4e-55 220.3 155 69.0
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 3.2e-55 219.2 156 69.2
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 7.2e-55 218.0 145 74.5
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 1.6e-54 216.9 154 68.8
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 1.6e-54 216.9 155 72.9
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 3.6e-54 215.7 155 71.0
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 7.9e-54 214.5 177 62.1
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 2.3e-53 213.0 157 70.1
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 3.9e-53 212.2 137 80.3
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 8.8e-53 211.1 185 62.7
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 2.0e-52 209.9 144 72.2
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 2.6e-52 209.5 171 63.7
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 5.7e-52 208.4 183 57.9
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 7.0e-50 201.4 125 81.6
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 1.2e-49 200.7 218 52.3
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 2.0e-49 199.9 203 54.2
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 7.7e-49 198.0 136 70.6
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 5.0e-48 195.3 144 73.6
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 8.5e-48 194.5 180 61.7
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 8.5e-48 194.5 180 61.7
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.5e-47 193.7 118 83.9
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 6.1e-46 188.3 183 55.7
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 1.4e-45 187.2 211 49.8
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.4e-42 176.4 106 83.0
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 7.0e-42 174.9 106 82.1
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 7.0e-42 174.9 137 65.0
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 2.0e-41 173.3 219 47.5
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 2.9e-40 169.5 219 47.0
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 2.9e-40 169.5 215 47.4
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 1.2e-36 157.5 108 75.0
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 9.8e-36 154.5 155 51.6
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 1.1e-26 124.4 87 67.8
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 1.9e-23 113.6 183 41.5
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 2.9e-19 99.8 196 34.7
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.4e-13 80.9 80 53.8
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.8e-13 80.5 106 47.2
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.8e-13 80.5 106 47.2


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