Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G262300 Carya illinoinensis HOM05D002238 ORTHO05D007272 3.2e-245 851.3 424 100.0
Haze_00046 Corylus avellana HOM05D002238 ORTHO05D007272 5.2e-195 684.5 424 79.2
QL09p012798 Quercus lobata HOM05D002238 ORTHO05D007272 9.9e-186 653.7 425 75.8
Cfa016290 Carpinus fangiana HOM05D002238 ORTHO05D007272 3.0e-174 615.5 382 80.4
COL.COLO4_00195 Corchorus olitorius HOM05D002238 ORTHO05D007272 9.6e-157 557.4 422 66.4
Prupe.1G474900 Prunus persica HOM05D002238 ORTHO05D007272 1.8e-155 553.1 427 64.4
Duzib168G0728 Durio zibethinus HOM05D002238 ORTHO05D007272 1.7e-153 546.6 422 65.2
CANSAT54G2252 Cannabis sativa HOM05D002238 ORTHO05D007272 3.2e-152 542.3 425 64.2
Dinv30168 Davidia involucrata HOM05D002238 ORTHO05D007272 5.5e-152 541.6 426 65.3
Ciclev10010344m.g Citrus clementina HOM05D002238 ORTHO05D007272 2.1e-151 539.7 425 64.0
MD08G1146200 Malus domestica HOM05D002238 ORTHO05D007272 3.5e-151 538.9 427 64.2
Gohir.A09G019700 Gossypium hirsutum HOM05D002238 ORTHO05D007272 3.9e-150 535.4 422 63.5
RcHm_v2.0_Chr6g0298391 Rosa chinensis HOM05D002238 ORTHO05D007272 1.3e-148 530.4 419 61.3
Gohir.D09G019000 Gossypium hirsutum HOM05D002238 ORTHO05D007272 2.2e-148 529.6 422 63.0
Gohir.1Z049673 Gossypium hirsutum HOM05D002238 ORTHO05D007272 1.1e-147 527.3 422 62.8
TAR625G0243 Trochodendron aralioides HOM05D002238 ORTHO05D007272 2.6e-146 522.7 425 61.2
Gorai.006G022700 Gossypium raimondii HOM05D002238 ORTHO05D007272 3.4e-146 522.3 422 62.8
Thecc.09G149800 Theobroma cacao HOM05D002238 ORTHO05D007272 5.9e-146 521.5 404 65.6
FAN27G0629 Fragaria x ananassa HOM05D002238 ORTHO05D007272 1.3e-145 520.4 417 60.9
FvH4_2g29530 Fragaria vesca HOM05D002238 ORTHO05D007272 2.9e-145 519.2 417 60.7
FAN24G3345 Fragaria x ananassa HOM05D002238 ORTHO05D007272 1.4e-144 516.9 417 60.7
FAN20G0928 Fragaria x ananassa HOM05D002238 ORTHO05D007272 4.2e-144 515.4 417 60.4
Potri.006G251400 Populus trichocarpa HOM05D002238 ORTHO05D007272 1.8e-142 510.0 426 62.7
CSS0032500 Camellia sinensis var. sinensis HOM05D002238 ORTHO05D007272 6.9e-139 498.0 427 59.7
Manes.16G120100 Manihot esculenta HOM05D002238 ORTHO05D007272 6.9e-139 498.0 418 61.7
Nn2g11964 Nelumbo nucifera HOM05D002238 ORTHO05D007272 2.6e-138 496.1 424 58.5
Rhsim09G0014000 Rhododendron simsii HOM05D002238 ORTHO05D007272 7.7e-138 494.6 425 59.5
Lj8C25T21 Lonicera japonica HOM05D002238 ORTHO05D007272 2.5e-136 489.6 425 58.8
Rhsim02G0198300 Rhododendron simsii HOM05D002238 ORTHO05D007272 1.6e-135 486.9 427 59.5
TWI32G0967 Tripterygium wilfordii HOM05D002238 ORTHO05D007272 2.7e-135 486.1 425 57.9
Rhsim02G0195500 Rhododendron simsii HOM05D002238 ORTHO05D007272 2.3e-134 483.0 427 59.3
Cpa.g.sc533.2 Carica papaya HOM05D002238 ORTHO05D007272 1.1e-133 480.7 400 61.2
Sed0000756 Sechium edule HOM05D002238 ORTHO05D007272 4.4e-133 478.8 431 59.6
Eucgr.C01786 Eucalyptus grandis HOM05D002238 ORTHO05D007272 2.2e-132 476.5 399 60.9
ClCG05G017070 Citrullus lanatus HOM05D002238 ORTHO05D007272 3.7e-132 475.7 432 60.9
Peaxi162Scf00108g00063 Petunia axillaris HOM05D002238 ORTHO05D007272 1.8e-131 473.4 423 58.2
Actinidia13250 Actinidia chinensis HOM05D002238 ORTHO05D007272 2.4e-131 473.0 404 59.7
Nitab4.5_0004440g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 2.6e-130 469.5 423 57.2
PGSC0003DMG400020787 Solanum tuberosum HOM05D002238 ORTHO05D007272 3.4e-130 469.2 417 56.4
Sc11g0007780 Simmondsia chinensis HOM05D002238 ORTHO05D007272 4.5e-130 468.8 427 56.9
MBI04_g24206_MAGBIO Magnolia biondii HOM05D002238 ORTHO05D007272 1.0e-129 467.6 417 55.2
Oeu034743.2 Olea europaea HOM05D002238 ORTHO05D007272 1.3e-129 467.2 429 56.6
AUR62040710 Chenopodium quinoa HOM05D002238 ORTHO05D007272 2.2e-129 466.5 411 56.4
AUR62012126 Chenopodium quinoa HOM05D002238 ORTHO05D007272 3.8e-129 465.7 411 57.2
Sopen08g016790 Solanum pennellii HOM05D002238 ORTHO05D007272 2.5e-128 463.0 417 56.4
Peaxi162Scf00327g00039 Petunia axillaris HOM05D002238 ORTHO05D007272 2.7e-127 459.5 419 56.8
Medtr1g031820 Medicago truncatula HOM05D002238 ORTHO05D001984 3.9e-126 455.7 395 59.7
Ca_12577_v3 Cicer arietinum L. HOM05D002238 ORTHO05D007272 2.6e-125 453.0 419 55.8
Solyc08g061450.3 Solanum lycopersicum HOM05D002238 ORTHO05D007272 5.7e-125 451.8 417 55.9
Aqoxy3G03159 Aquilegia oxysepala HOM05D002238 ORTHO05D007272 1.3e-124 450.7 416 54.8
Cc08_g00970 Coffea canephora HOM05D002238 ORTHO05D007272 1.3e-124 450.7 426 55.9
Lj5g0011751 Lotus japonicus HOM05D002238 ORTHO05D007272 1.3e-124 450.7 418 56.7
Nitab4.5_0009247g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.3e-124 450.7 410 58.0
CsaV3_3G046550 Cucumis sativus L. HOM05D002238 ORTHO05D007272 2.8e-124 449.5 430 57.9
EL10Ac2g04715 Beta vulgaris HOM05D002238 ORTHO05D007272 1.4e-123 447.2 428 53.7
Sabra06G0196500 Salix brachista HOM05D002238 ORTHO05D007272 1.2e-122 444.1 425 56.0
PGR042G2797 Punica granatum HOM05D002238 ORTHO05D007272 1.6e-122 443.7 403 56.6
MELO3C003684.2 Cucumis melo HOM05D002238 ORTHO05D007272 1.3e-121 440.7 430 56.0
Lalb_Chr25g0279781 Lupinus albus HOM05D002238 ORTHO05D007272 1.1e-120 437.6 420 56.2
Glyma.05G173000 Glycine max HOM05D002238 ORTHO05D007272 3.2e-120 436.0 387 56.8
Ah.16g102520 Amaranthus hybridus HOM05D002238 ORTHO05D007272 7.2e-120 434.9 426 53.8
TPR.G36878 Trifolium pratense HOM05D002238 ORTHO05D001984 7.2e-120 434.9 409 54.8
VMungo1215G1712 Vigna mungo HOM05D002238 ORTHO05D007272 3.6e-119 432.6 420 53.3
Psat6g044800 Pisum sativum HOM05D002238 ORTHO05D001984 2.0e-117 426.8 398 55.3
CARHR187880 Cardamine hirsuta HOM05D002238 ORTHO05D007272 3.3e-117 426.0 400 56.0
arahy.Tifrunner.gnm1.ann1.U1RD55 Arachis hypogaea HOM05D002238 ORTHO05D007272 1.3e-116 424.1 412 54.1
DCAR_006233 Daucus carota HOM05D002238 ORTHO05D007272 2.2e-116 423.3 372 59.7
PSO349G0250 Papaver somniferum HOM05D002238 ORTHO05D007272 1.8e-115 420.2 397 52.9
Peaxi162Scf00002g00372 Petunia axillaris HOM05D002238 ORTHO05D003453 7.0e-115 418.3 395 56.5
PSO017G3814 Papaver somniferum HOM05D002238 ORTHO05D007272 2.0e-114 416.8 419 50.6
Phvul.003G021200 Phaseolus vulgaris HOM05D002238 ORTHO05D007272 2.7e-114 416.4 407 52.1
THA.LOC104810431 Tarenaya hassleriana HOM05D002238 ORTHO05D007272 5.9e-114 415.2 400 54.2
Sp2g22030 Schrenkiella parvula HOM05D002238 ORTHO05D007272 3.8e-113 412.5 400 54.2
Migut.A00055 Erythranthe guttata HOM05D002238 ORTHO05D007272 8.5e-113 411.4 392 54.1
AT5G25500 Arabidopsis thaliana HOM05D002238 ORTHO05D007272 7.2e-112 408.3 400 54.2
AL6G37300 Arabidopsis lyrata HOM05D002238 ORTHO05D007272 9.4e-112 407.9 400 53.8
Thhalv10005310m.g Eutrema salsugineum HOM05D002238 ORTHO05D007272 1.2e-111 407.5 400 54.5
Carub.0006s2336 Capsella rubella HOM05D002238 ORTHO05D007272 2.7e-111 406.4 403 53.8
Aa31LG11G4600 Aethionema arabicum HOM05D002238 ORTHO05D007272 3.0e-110 402.9 404 54.2
arahy.Tifrunner.gnm1.ann1.BAI8MS Arachis hypogaea HOM05D002238 ORTHO05D007272 2.0e-109 400.2 395 53.9
C07p42320 Brassica napus HOM05D002238 ORTHO05D007272 2.0e-109 400.2 408 54.9
arahy.Tifrunner.gnm1.ann1.V2KEMD Arachis hypogaea HOM05D002238 ORTHO05D007272 2.6e-109 399.8 395 54.2
BolC7t44761H Brassica oleracea HOM05D002238 ORTHO05D007272 3.4e-109 399.4 408 54.9
QL01p053808 Quercus lobata HOM05D002238 ORTHO05D007272 7.5e-109 398.3 256 79.7
arahy.Tifrunner.gnm1.ann1.H3G4DQ Arachis hypogaea HOM05D002238 ORTHO05D007272 9.8e-109 397.9 396 54.3
arahy.Tifrunner.gnm1.ann1.TBR9XZ Arachis hypogaea HOM05D002238 ORTHO05D007272 2.2e-108 396.7 397 52.9
arahy.Tifrunner.gnm1.ann1.NZP3ZD Arachis hypogaea HOM05D002238 ORTHO05D007272 9.1e-107 391.3 390 54.4
C02p59480 Brassica napus HOM05D002238 ORTHO05D007272 1.3e-105 387.5 390 53.1
Peaxi162Scf00108g00056 Petunia axillaris HOM05D002238 ORTHO05D007272 1.1e-104 384.4 386 54.1
arahy.Tifrunner.gnm1.ann1.Z0G856 Arachis hypogaea HOM05D002238 ORTHO05D007272 1.9e-104 383.6 387 54.0
SGA_v2.0_scaffold20G09144 Striga asiatica HOM05D002238 ORTHO05D007272 1.9e-104 383.6 438 47.5
BraA02t08935Z Brassica rapa HOM05D002238 ORTHO05D007272 2.5e-104 383.3 390 52.8
BolC2t12011H Brassica oleracea HOM05D002238 ORTHO05D007272 5.5e-104 382.1 390 53.1
Lsat_1_v5_gn_5_105001 Lactuca sativa HOM05D002238 ORTHO05D007272 7.2e-104 381.7 417 50.4
A02p39700 Brassica napus HOM05D002238 ORTHO05D007272 1.2e-103 380.9 390 52.6
unitig_32.g11479 Utricularia gibba HOM05D002238 ORTHO05D007272 1.4e-102 377.5 382 51.6
QL10p065634 Quercus lobata HOM05D002238 ORTHO05D007272 2.8e-100 369.8 253 71.9
GSVIVG01035523001 Vitis vinifera HOM05D002238 ORTHO05D007272 5.4e-99 365.5 426 49.3
HanXRQChr13g0402681 Helianthus annuus HOM05D002238 ORTHO05D007272 1.2e-95 354.4 401 48.6
SHI18572 Sapria himalayana HOM05D002238 ORTHO05D007272 4.0e-94 349.4 400 48.8
HPP92_000893 Vanilla planifolia HOM05D002238 ORTHO05D007272 2.4e-91 340.1 385 47.5
BraA06t26543Z Brassica rapa HOM05D002238 ORTHO05D007272 2.3e-89 333.6 301 59.1
Nitab4.5_0009119g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 3.0e-89 333.2 326 55.8
Peaxi162Scf00365g00022 Petunia axillaris HOM05D002238 ORTHO05D007272 2.1e-82 310.5 406 45.6
MD15G1122300 Malus domestica HOM05D002238 ORTHO05D007272 6.8e-78 295.4 275 56.4
MD15G1119600 Malus domestica HOM05D002238 ORTHO05D007272 1.7e-76 290.8 337 49.6
Nitab4.5_0017994g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 8.3e-76 288.5 295 56.3
ATR1156G046 Amborella trichopoda HOM05D002238 ORTHO05D007272 1.4e-75 287.7 266 55.3
Aqoxy5G03332 Aquilegia oxysepala HOM05D002238 ORTHO05D007272 1.1e-72 278.1 285 50.2
Duzib187G0736 Durio zibethinus HOM05D002238 ORTHO05D007272 1.9e-72 277.3 208 67.8
ECA233G3411 Erigeron canadensis HOM05D002238 ORTHO05D007272 1.9e-67 260.8 230 56.1
Zm00001eb090760 Zea mays HOM05D002238 ORTHO05D007272 2.4e-67 260.4 406 40.1
Atru.chr7.2387 Acer truncatum HOM05D002238 ORTHO05D007272 1.7e-65 254.2 174 74.1
Glyma.09G122801 Glycine max HOM05D002238 ORTHO05D007272 2.1e-63 247.3 196 61.2
QL10p065406 Quercus lobata HOM05D002238 ORTHO05D007272 1.1e-62 245.0 253 53.0
Os11g0207300 Oryza sativa ssp. japonica HOM05D002238 ORTHO05D007272 3.4e-61 240.0 416 36.3
Atru.chr7.2264 Acer truncatum HOM05D002238 ORTHO05D007272 2.7e-58 230.3 192 59.4
Nitab4.5_0004440g0040 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.3e-55 221.5 169 65.7
SEGI_41370 Sequoiadendron giganteum HOM05D002238 ORTHO05D007272 3.1e-54 216.9 368 34.0
Peaxi162Scf00108g00048 Petunia axillaris HOM05D002238 ORTHO05D007272 1.2e-50 204.9 198 58.1
BcaNung07110 Brassica carinata HOM05D002238 ORTHO05D007272 1.5e-48 198.0 178 57.9
Nitab4.5_0013543g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.4e-43 181.4 137 67.9
Peaxi162Scf00015g02010 Petunia axillaris HOM05D002238 ORTHO05D004044 6.0e-42 176.0 193 51.3
Nitab4.5_0011728g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.3e-41 174.9 322 35.1
SalBow7G3196 Salvia bowleyana HOM05D002238 ORTHO05D007272 1.6e-39 167.9 157 54.1
Nitab4.5_0012587g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 2.4e-38 164.1 279 37.3
SalBow6G2105 Salvia bowleyana HOM05D002238 ORTHO05D007272 5.3e-38 162.9 160 53.1
A06p36210 Brassica napus HOM05D002238 ORTHO05D007272 2.2e-36 157.5 177 54.8
Nitab4.5_0011591g0010 Nicotiana tabacum HOM05D002238 ORTHO05D007272 7.4e-32 142.5 111 68.5
Nitab4.5_0002007g0110 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.4e-30 138.3 115 65.2
BcaB07g29994 Brassica carinata HOM05D002238 ORTHO05D007272 5.3e-30 136.3 179 46.4
MD15G1118500 Malus domestica HOM05D002238 ORTHO05D007272 6.9e-30 136.0 107 60.7
Nitab4.5_0002007g0090 Nicotiana tabacum HOM05D002238 ORTHO05D007272 6.1e-26 122.9 106 63.2
Nitab4.5_0011728g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 2.0e-21 107.8 117 45.3
Atru.chr7.2385 Acer truncatum HOM05D002238 ORTHO05D026268 3.4e-21 107.1 101 48.5
Nitab4.5_0012587g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.0e-20 105.5 117 44.4
Medtr3g118420 Medicago truncatula HOM05D002238 ORTHO05D026268 1.4e-14 85.1 85 49.4
Nitab4.5_0002007g0100 Nicotiana tabacum HOM05D002238 ORTHO05D007272 1.1e-11 75.5 86 48.8
Peaxi162Scf00015g02018 Petunia axillaris HOM05D002238 ORTHO05D026268 8.8e-09 65.9 90 41.1
Sabra18G0031600 Salix brachista HOM05D002238 ORTHO05D026268 2.2e-07 61.2 53 47.2
Nitab4.5_0011591g0020 Nicotiana tabacum HOM05D002238 ORTHO05D007272 2.8e-07 60.8 70 51.4
Actinidia22361 Actinidia chinensis HOM05D002238 ORTHO05D055889 9.1e-06 55.8 52 51.9


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