Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 5.9e-83 310.8 158 100.0
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 3.3e-54 215.3 134 82.8
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 1.1e-52 210.3 135 82.2
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 1.6e-51 206.5 134 79.1
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.6e-51 206.5 134 79.1
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.6e-51 206.5 134 79.1
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 5.9e-51 204.5 134 76.9
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 7.7e-51 204.1 134 78.4
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 7.7e-51 204.1 134 78.4
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 7.7e-51 204.1 134 78.4
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 1.3e-50 203.4 134 75.4
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 2.9e-50 202.2 134 77.6
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 8.5e-50 200.7 134 77.6
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.1e-49 200.3 134 76.1
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.9e-49 199.5 134 77.6
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 3.2e-49 198.7 134 76.1
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 4.2e-49 198.4 134 76.1
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 4.2e-49 198.4 134 76.1
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 5.5e-49 198.0 134 74.6
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 2.7e-48 195.7 134 75.4
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 2.7e-48 195.7 134 75.4
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 2.7e-48 195.7 134 75.4
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 2.7e-48 195.7 134 75.4
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.6e-48 195.3 134 75.4
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 1.0e-47 193.7 134 71.6
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 2.3e-47 192.6 134 71.6
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.3e-47 192.6 134 72.4
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 5.2e-47 191.4 132 75.0
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 6.8e-47 191.0 134 73.9
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 6.8e-47 191.0 136 75.0
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.5e-46 189.9 134 73.1
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 2.0e-46 189.5 134 72.4
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.4e-46 188.7 134 71.6
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 4.4e-46 188.3 134 72.4
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 5.7e-46 188.0 134 70.9
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 7.5e-46 187.6 132 72.7
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 1.3e-45 186.8 134 70.9
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.7e-45 186.4 134 71.6
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 6.3e-45 184.5 136 71.3
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 8.3e-45 184.1 134 68.7
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 1.4e-44 183.3 134 71.6
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 1.8e-44 183.0 145 68.3
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 3.1e-44 182.2 134 70.1
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 3.1e-44 182.2 134 67.9
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 4.1e-44 181.8 134 70.9
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 1.2e-43 180.3 132 70.5
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 1.6e-43 179.9 134 68.7
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 2.0e-43 179.5 134 67.2
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 3.5e-43 178.7 134 71.6
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 4.5e-43 178.3 134 67.9
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 1.0e-42 177.2 134 66.4
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 1.0e-42 177.2 134 69.4
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 1.3e-42 176.8 134 67.2
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 2.2e-42 176.0 134 68.7
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 2.2e-42 176.0 134 68.7
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 2.9e-42 175.6 134 70.9
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 3.8e-42 175.3 134 66.4
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 3.8e-42 175.3 134 66.4
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 1.9e-41 172.9 135 68.1
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 1.9e-41 172.9 135 68.9
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 1.9e-41 172.9 135 68.9
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 1.9e-41 172.9 135 68.9
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 1.9e-41 172.9 135 68.9
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 1.9e-41 172.9 132 69.7
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 2.5e-41 172.6 134 65.7
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 2.5e-41 172.6 134 65.7
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 2.5e-41 172.6 135 68.9
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 5.5e-41 171.4 134 69.4
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 9.5e-41 170.6 133 67.7
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 1.2e-40 170.2 135 64.4
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 1.6e-40 169.9 135 66.7
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 2.7e-40 169.1 135 63.7
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 3.6e-40 168.7 135 67.4
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 1.0e-39 167.2 135 65.2
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 1.8e-39 166.4 135 66.7
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 4.0e-39 165.2 135 65.2
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 4.0e-39 165.2 145 63.4
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 4.0e-39 165.2 133 63.9
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 5.2e-39 164.9 135 65.9
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 6.8e-39 164.5 135 65.9
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 1.2e-38 163.7 136 66.9
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 2.0e-38 162.9 135 63.7
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 2.6e-38 162.5 131 62.6
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 4.4e-38 161.8 133 63.9
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.4e-38 161.8 134 64.2
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 5.7e-38 161.4 135 63.7
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 7.5e-38 161.0 134 61.9
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 7.5e-38 161.0 137 65.7
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 1.3e-37 160.2 119 69.7
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 2.2e-37 159.5 124 69.4
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.4e-36 156.0 134 64.9
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 5.4e-36 154.8 134 58.2
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 7.0e-36 154.5 135 59.3
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 1.2e-35 153.7 126 62.7
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 3.5e-35 152.1 134 58.2
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 1.0e-34 150.6 123 61.8
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 3.8e-34 148.7 149 57.0
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 6.6e-34 147.9 134 61.9
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 1.5e-33 146.7 110 70.9
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 2.5e-33 146.0 136 58.1
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 8.0e-32 141.0 134 56.7
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 6.8e-31 137.9 134 56.7
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 5.4e-28 128.3 134 57.5
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 5.4e-28 128.3 134 53.7
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.6e-27 126.7 120 58.3
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 7.3e-25 117.9 145 49.7
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 2.8e-24 115.9 134 50.0
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 3.6e-24 115.5 142 50.7
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 4.4e-22 108.6 135 48.1
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 2.2e-21 106.3 127 46.5
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 3.5e-19 99.0 139 43.9
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 1.2e-16 90.5 93 53.8
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.4e-15 87.0 120 46.7
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.8e-15 86.7 117 47.0
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 3.1e-15 85.9 117 41.0
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 6.8e-15 84.7 58 74.1
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 2.6e-14 82.8 128 42.2
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 2.6e-14 82.8 125 43.2
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.9e-13 78.6 117 41.9
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.4e-12 76.3 117 41.0


User provided reference genes

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