Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G235800 Carya illinoinensis HOM05D008167 ORTHO05D010296 3.5e-233 811.2 403 100.0
Cfa015915 Carpinus fangiana HOM05D008167 ORTHO05D010296 7.0e-181 637.5 403 78.4
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 7.0e-165 584.3 400 73.0
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 5.8e-143 511.5 392 65.3
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 7.5e-143 511.1 393 64.1
Lj4C719T5 Lonicera japonica HOM05D008167 ORTHO05D010296 2.9e-142 509.2 393 62.8
Lj4C716T9 Lonicera japonica HOM05D008167 ORTHO05D010296 1.2e-140 503.8 393 62.6
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 4.6e-140 501.9 402 62.4
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 3.9e-139 498.8 391 63.4
Gorai.002G219300 Gossypium raimondii HOM05D008167 ORTHO05D010296 2.2e-134 483.0 392 61.5
TWI56G0729 Tripterygium wilfordii HOM05D008167 ORTHO05D010296 3.7e-134 482.3 399 59.1
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 1.1e-133 480.7 390 60.0
Prupe.1G513100 Prunus persica HOM05D008167 ORTHO05D010296 4.1e-133 478.8 399 60.9
COL.COLO4_16444 Corchorus olitorius HOM05D008167 ORTHO05D010296 1.7e-131 473.4 392 58.2
Aqoxy6G00583 Aquilegia oxysepala HOM05D008167 ORTHO05D010296 5.6e-130 468.4 412 59.7
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 4.7e-129 465.3 396 58.3
MBI02_g36661_MAGBIO Magnolia biondii HOM05D008167 ORTHO05D010296 4.7e-129 465.3 393 59.5
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 4.0e-128 462.2 390 59.5
Gohir.D01G176900 Gossypium hirsutum HOM05D008167 ORTHO05D010296 9.9e-127 457.6 360 63.1
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 2.9e-126 456.1 401 56.4
Duzib093G0044 Durio zibethinus HOM05D008167 ORTHO05D010296 9.2e-125 451.1 378 59.0
RcHm_v2.0_Chr7g0239831 Rosa chinensis HOM05D008167 ORTHO05D010296 1.2e-124 450.7 401 58.4
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 1.6e-124 450.3 397 58.2
Lalb_Chr01g0013571 Lupinus albus HOM05D008167 ORTHO05D010296 4.6e-124 448.7 387 56.6
Cpa.g.sc66.82 Carica papaya HOM05D008167 ORTHO05D010296 1.3e-123 447.2 358 60.6
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 3.0e-123 446.0 397 57.7
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 6.6e-123 444.9 378 56.6
Gohir.A01G186400 Gossypium hirsutum HOM05D008167 ORTHO05D010296 6.6e-123 444.9 369 60.4
FAN08G3120 Fragaria x ananassa HOM05D008167 ORTHO05D010296 8.9e-120 434.5 402 56.0
FAN04G1438 Fragaria x ananassa HOM05D008167 ORTHO05D010296 2.6e-119 433.0 403 55.8
FvH4_5g37850 Fragaria vesca HOM05D008167 ORTHO05D010296 3.4e-119 432.6 402 56.0
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 2.2e-118 429.9 359 58.2
FAN13G0369 Fragaria x ananassa HOM05D008167 ORTHO05D010296 1.1e-117 427.6 403 55.8
arahy.Tifrunner.gnm1.ann1.DD9M5F Arachis hypogaea HOM05D008167 ORTHO05D010296 2.7e-116 422.9 441 49.0
CANSAT25G1054 Cannabis sativa HOM05D008167 ORTHO05D010296 1.8e-112 410.2 359 58.5
Atru.chr13.1254 Acer truncatum HOM05D008167 ORTHO05D010296 6.9e-112 408.3 310 62.9
FAN18G0166 Fragaria x ananassa HOM05D008167 ORTHO05D010296 9.0e-112 407.9 347 58.8
VMungo0331G0414 Vigna mungo HOM05D008167 ORTHO05D010296 2.4e-109 399.8 393 53.4
Medtr8g020400 Medicago truncatula HOM05D008167 ORTHO05D010296 9.3e-109 397.9 349 56.2
GSVIVG01009002001 Vitis vinifera HOM05D008167 ORTHO05D010296 3.0e-107 392.9 279 66.3
MD15G1365100 Malus domestica HOM05D008167 ORTHO05D010296 2.1e-105 386.7 309 63.1
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 1.8e-104 383.6 378 51.3
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 5.3e-104 382.1 379 50.7
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 1.2e-103 380.9 390 51.0
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 3.4e-103 379.4 399 49.1
DCAR_008714 Daucus carota HOM05D008167 ORTHO05D010296 1.1e-101 374.4 310 58.1
Sabra02G0073900 Salix brachista HOM05D008167 ORTHO05D010296 3.5e-100 369.4 370 53.0
TPR.G32489 Trifolium pratense HOM05D008167 ORTHO05D010296 9.7e-90 334.7 314 52.2
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 4.6e-84 315.8 390 44.1
vmacro21234 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 6.1e-84 315.5 323 53.3
ECA232G3852 Erigeron canadensis HOM05D008167 ORTHO05D010296 1.0e-83 314.7 264 57.6
Ca_23370_v3 Cicer arietinum L. HOM05D008167 ORTHO05D010296 1.8e-83 313.9 269 56.1
Psat4g183040 Pisum sativum HOM05D008167 ORTHO05D010296 4.8e-81 305.8 270 54.8
Eucgr.F02444 Eucalyptus grandis HOM05D008167 ORTHO05D010296 1.1e-72 278.1 265 53.6
ATR0564G341 Amborella trichopoda HOM05D008167 ORTHO05D010296 2.5e-69 266.9 252 52.8
Haze_17026 Corylus avellana HOM05D000028 ORTHO05D010296 8.8e-59 231.9 180 66.1
Glyma.16G006900 Glycine max HOM05D008167 ORTHO05D010296 1.5e-50 204.5 279 43.4
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 8.3e-49 198.7 417 32.9
Haze_00155 Corylus avellana HOM05D008167 ORTHO05D010296 5.4e-48 196.1 112 83.0
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 2.9e-46 190.3 111 81.1
SEGI_30626 Sequoiadendron giganteum HOM05D008167 ORTHO05D010296 4.7e-44 183.0 256 39.5
Haze_15967 Corylus avellana HOM05D008167 ORTHO05D010296 6.1e-44 182.6 132 67.4
vmacro21235 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 7.3e-37 159.1 111 63.1
Haze_08650 Corylus avellana HOM05D008167 ORTHO05D010296 1.7e-33 147.9 82 81.7
Glyma.07G037500 Glycine max HOM05D008167 ORTHO05D010296 4.4e-18 96.7 116 46.6
MD15G1365000 Malus domestica HOM05D008167 ORTHO05D010296 3.5e-15 87.0 83 54.2
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 1.1e-13 82.0 381 23.6
Medtr8g020410 Medicago truncatula HOM05D008167 ORTHO05D010296 3.4e-10 70.5 49 55.1
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 2.2e-09 67.8 368 22.0
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 3.8e-09 67.0 334 22.5
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 1.1e-08 65.5 328 24.4
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 1.4e-08 65.1 334 22.8
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 3.2e-08 63.9 332 23.5
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 7.1e-08 62.8 338 22.2
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 9.2e-08 62.4 327 23.9
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.6e-07 61.6 327 23.9
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 1.0e-06 58.9 336 22.0
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 3.9e-06 57.0 338 20.4


User provided reference genes

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