Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G232200 Carya illinoinensis HOM05D004520 ORTHO05D005520 5.5e-156 554.3 284 100.0
CiPaw.06G022900 Carya illinoinensis HOM05D004520 ORTHO05D005520 3.2e-47 193.0 303 49.5
Cfa015929 Carpinus fangiana HOM05D004520 ORTHO05D005520 1.2e-46 191.0 272 47.4
Haze_00561 Corylus avellana HOM05D004520 ORTHO05D005520 1.6e-43 180.6 288 44.4
Prupe.1G510900 Prunus persica HOM05D004520 ORTHO05D005520 1.1e-36 157.9 299 40.1
Duzib041G0092 Durio zibethinus HOM05D004520 ORTHO05D005520 1.9e-36 157.1 274 40.9
Duzib041G0365 Durio zibethinus HOM05D004520 ORTHO05D005520 1.9e-36 157.1 274 40.9
Duzib093G1357 Durio zibethinus HOM05D004520 ORTHO05D005520 1.9e-36 157.1 288 42.0
Potri.002G092000 Populus trichocarpa HOM05D004520 ORTHO05D005520 2.5e-36 156.8 280 44.6
QL12p035753 Quercus lobata HOM05D004520 ORTHO05D005520 5.7e-36 155.6 195 47.7
Potri.005G166900 Populus trichocarpa HOM05D004520 ORTHO05D005520 1.6e-35 154.1 275 43.3
Sabra05G0127200 Salix brachista HOM05D004520 ORTHO05D005520 5.3e-34 149.1 304 38.5
Duzib116G0626 Durio zibethinus HOM05D004520 ORTHO05D005520 2.0e-33 147.1 279 38.4
RcHm_v2.0_Chr7g0240121 Rosa chinensis HOM05D004520 ORTHO05D005520 2.0e-33 147.1 274 40.1
FvH4_5g38140 Fragaria vesca HOM05D004520 ORTHO05D000031 5.0e-32 142.5 151 52.3
FAN18G4472 Fragaria x ananassa HOM05D004520 ORTHO05D005520 5.0e-32 142.5 151 52.3
Gorai.010G044800 Gossypium raimondii HOM05D004520 ORTHO05D005520 8.5e-32 141.7 276 38.8
MD15G1363200 Malus domestica HOM05D004520 ORTHO05D005520 8.5e-32 141.7 285 41.4
FAN13G2359 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.1e-31 141.4 277 37.5
COL.COLO4_16491 Corchorus olitorius HOM05D004520 ORTHO05D005520 2.5e-31 140.2 293 37.9
FAN08G3230 Fragaria x ananassa HOM05D004520 ORTHO05D005520 3.2e-31 139.8 151 51.7
Thecc.08G113300 Theobroma cacao HOM05D004520 ORTHO05D005520 3.2e-31 139.8 289 40.8
Manes.02G156600 Manihot esculenta HOM05D004520 ORTHO05D005520 5.5e-31 139.0 330 33.9
TWI56G1051 Tripterygium wilfordii HOM05D004520 ORTHO05D005520 5.5e-31 139.0 276 38.0
Gohir.D06G040100 Gossypium hirsutum HOM05D004520 ORTHO05D005520 1.6e-30 137.5 276 40.2
Gohir.A06G039100 Gossypium hirsutum HOM05D004520 ORTHO05D005520 6.1e-30 135.6 276 40.9
FAN04G1722 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.0e-29 134.8 274 42.0
AT1G22110 Arabidopsis thaliana HOM05D004520 ORTHO05D005520 3.0e-29 133.3 288 38.2
TWI12G0901 Tripterygium wilfordii HOM05D004520 ORTHO05D005520 3.0e-29 133.3 287 36.9
MD08G1176500 Malus domestica HOM05D004520 ORTHO05D005520 8.7e-29 131.7 152 51.3
BcaC05g26135 Brassica carinata HOM05D004520 ORTHO05D005520 1.9e-28 130.6 285 37.5
CARHR022460 Cardamine hirsuta HOM05D004520 ORTHO05D005520 1.9e-28 130.6 152 50.7
Carub.0001s2166 Capsella rubella HOM05D004520 ORTHO05D005520 2.5e-28 130.2 172 48.3
BcaB03g14234 Brassica carinata HOM05D004520 ORTHO05D005520 5.7e-28 129.0 152 50.0
AL1G35550 Arabidopsis lyrata HOM05D004520 ORTHO05D005520 2.2e-27 127.1 295 36.9
BolC5t30811H Brassica oleracea HOM05D004520 ORTHO05D005520 6.3e-27 125.6 285 37.2
Prupe.1G552400 Prunus persica HOM05D004520 ORTHO05D005520 1.4e-26 124.4 269 41.3
A07p14760 Brassica napus HOM05D004520 ORTHO05D005520 1.8e-26 124.0 182 45.1
C05p21170 Brassica napus HOM05D004520 ORTHO05D005520 1.8e-26 124.0 286 36.4
Dinv44735 Davidia involucrata HOM05D004520 ORTHO05D005520 2.4e-26 123.6 179 42.5
BcaB07g32230 Brassica carinata HOM05D004520 ORTHO05D005520 5.3e-26 122.5 175 45.7
BraA07t29221Z Brassica rapa HOM05D004520 ORTHO05D005520 5.3e-26 122.5 182 44.5
PGR042G0053 Punica granatum HOM05D004520 ORTHO05D005520 5.3e-26 122.5 285 36.8
Gohir.A02G075405 Gossypium hirsutum HOM05D004520 ORTHO05D005520 6.9e-26 122.1 149 47.7
MD15G1408400 Malus domestica HOM05D004520 ORTHO05D005520 6.9e-26 122.1 182 43.4
BcaC06g34928 Brassica carinata HOM05D004520 ORTHO05D005520 9.0e-26 121.7 187 43.9
A09p42670 Brassica napus HOM05D004520 ORTHO05D005520 9.0e-26 121.7 195 42.6
BraA09t39742Z Brassica rapa HOM05D004520 ORTHO05D005520 9.0e-26 121.7 195 42.6
BcaB03g11898 Brassica carinata HOM05D003425 ORTHO05D003897 1.2e-25 121.3 151 47.0
Gorai.005G092700 Gossypium raimondii HOM05D004520 ORTHO05D005520 1.5e-25 120.9 149 50.3
arahy.Tifrunner.gnm1.ann1.8K5I59 Arachis hypogaea HOM05D004520 ORTHO05D005520 2.0e-25 120.6 89 64.0
Gohir.D02G082633 Gossypium hirsutum HOM05D004520 ORTHO05D005520 2.6e-25 120.2 149 50.3
CANSAT25G0424 Cannabis sativa HOM05D004520 ORTHO05D005520 4.5e-25 119.4 139 47.5
Glyma.14G168100 Glycine max HOM05D004520 ORTHO05D005520 4.5e-25 119.4 150 46.7
Glyma.13G086100 Glycine max HOM05D004520 ORTHO05D005520 5.9e-25 119.0 204 41.2
Psat2g075760 Pisum sativum HOM05D004520 ORTHO05D005520 5.9e-25 119.0 135 46.7
MD08G1219800 Malus domestica HOM05D004520 ORTHO05D005520 7.7e-25 118.6 215 43.7
arahy.Tifrunner.gnm1.ann1.1581IW Arachis hypogaea HOM05D004520 ORTHO05D005520 1.7e-24 117.5 204 39.7
Cc00_g24440 Coffea canephora HOM05D004520 ORTHO05D005520 2.2e-24 117.1 139 45.3
Aa31LG7G6090 Aethionema arabicum HOM05D004520 ORTHO05D005520 2.9e-24 116.7 138 48.6
CANSAT25G0040 Cannabis sativa HOM05D004520 ORTHO05D005520 3.8e-24 116.3 139 47.5
BcaC07g39145 Brassica carinata HOM05D003425 ORTHO05D003897 6.5e-24 115.5 151 45.7
BolC7t42702H Brassica oleracea HOM05D004520 ORTHO05D005520 6.5e-24 115.5 279 39.4
C07p21720 Brassica napus HOM05D004520 ORTHO05D005520 8.5e-24 115.2 187 43.9
BolC8t49777H Brassica oleracea HOM05D004520 ORTHO05D005520 1.9e-23 114.0 163 44.8
Lj1g0026094 Lotus japonicus HOM05D004520 ORTHO05D005520 1.9e-23 114.0 265 35.1
Ciclev10003829m.g Citrus clementina HOM05D004520 ORTHO05D005520 2.5e-23 113.6 142 46.5
Oeu024567.1 Olea europaea HOM05D004520 ORTHO05D005520 3.2e-23 113.2 176 36.9
Ca_05234_v3 Cicer arietinum L. HOM05D004520 ORTHO05D005520 5.5e-23 112.5 137 44.5
Manes.18G070900 Manihot esculenta HOM05D004520 ORTHO05D005520 9.4e-23 111.7 92 60.9
MBI02_g37831_MAGBIO Magnolia biondii HOM05D004520 ORTHO05D005520 1.2e-22 111.3 76 65.8
Medtr5g061650 Medicago truncatula HOM05D004520 ORTHO05D005520 1.6e-22 110.9 239 38.1
Lalb_Chr10g0102151 Lupinus albus HOM05D004520 ORTHO05D005520 2.7e-22 110.2 279 33.0
Phvul.008G170000 Phaseolus vulgaris HOM05D004520 ORTHO05D005520 4.6e-22 109.4 193 40.9
Gohir.A05G268200 Gossypium hirsutum HOM05D004520 ORTHO05D005520 1.0e-21 108.2 147 43.5
TPR.G39080 Trifolium pratense HOM05D004520 ORTHO05D005520 3.0e-21 106.7 260 33.1
Migut.N02919 Erythranthe guttata HOM05D004520 ORTHO05D005520 5.1e-21 105.9 139 42.4
COL.COLO4_16493 Corchorus olitorius HOM05D004520 ORTHO05D005520 6.7e-21 105.5 110 50.9
Gohir.D05G269800 Gossypium hirsutum HOM05D004520 ORTHO05D005520 6.7e-21 105.5 152 45.4
Peaxi162Scf00160g01523 Petunia axillaris HOM05D004520 ORTHO05D005520 6.7e-21 105.5 180 39.4
Atru.chr13.1276 Acer truncatum HOM05D004520 ORTHO05D005520 8.8e-21 105.1 262 36.3
Potri.005G169900 Populus trichocarpa HOM05D004520 ORTHO05D005520 1.1e-20 104.8 117 49.6
Gohir.A05G230000 Gossypium hirsutum HOM05D004520 ORTHO05D005520 2.6e-20 103.6 63 76.2
Gohir.D05G232300 Gossypium hirsutum HOM05D004520 ORTHO05D005520 2.6e-20 103.6 63 76.2
Gorai.009G240500 Gossypium raimondii HOM05D004520 ORTHO05D005520 2.6e-20 103.6 63 76.2
Gorai.009G282400 Gossypium raimondii HOM05D004520 ORTHO05D005520 3.3e-20 103.2 152 44.1
Peaxi162Scf00168g00043 Petunia axillaris HOM05D004520 ORTHO05D005520 3.3e-20 103.2 237 33.3
CDE10G1290 Ceratophyllum demersum HOM05D004520 ORTHO05D005520 4.3e-20 102.8 65 67.7
FAN08G0369 Fragaria x ananassa HOM05D004520 ORTHO05D005520 5.7e-20 102.4 66 74.2
FAN18G1022 Fragaria x ananassa HOM05D004520 ORTHO05D005520 5.7e-20 102.4 66 74.2
Manes.02G156700 Manihot esculenta HOM05D004520 ORTHO05D005520 1.3e-19 101.3 76 64.5
CDE10G0363 Ceratophyllum demersum HOM05D004520 ORTHO05D005520 1.7e-19 100.9 155 41.3
FvH4_5g38160 Fragaria vesca HOM05D004520 ORTHO05D005520 2.2e-19 100.5 66 72.7
Thecc.08G113500 Theobroma cacao HOM05D004520 ORTHO05D005520 2.2e-19 100.5 80 62.5
PSO210G7148 Papaver somniferum HOM05D004520 ORTHO05D005520 3.7e-19 99.8 66 69.7
PSO447G0143 Papaver somniferum HOM05D004520 ORTHO05D005520 3.7e-19 99.8 66 69.7
FAN04G0088 Fragaria x ananassa HOM05D004520 ORTHO05D005520 6.3e-19 99.0 110 51.8
FAN13G0916 Fragaria x ananassa HOM05D004520 ORTHO05D005520 6.3e-19 99.0 66 71.2
CiPaw.05G232100 Carya illinoinensis HOM05D004520 ORTHO05D005520 1.1e-18 98.2 121 44.6
Nitab4.5_0006678g0010 Nicotiana tabacum HOM05D004520 ORTHO05D005520 3.1e-18 96.7 151 39.7
Prupe.1G510300 Prunus persica HOM05D004520 ORTHO05D005520 3.1e-18 96.7 67 65.7
Sabra05G0127300 Salix brachista HOM05D004520 ORTHO05D005520 4.1e-18 96.3 207 38.2
Nitab4.5_0002534g0030 Nicotiana tabacum HOM05D004520 ORTHO05D005520 6.9e-18 95.5 154 39.0
Actinidia10294 Actinidia chinensis HOM05D004520 ORTHO05D005520 2.0e-17 94.0 140 40.7
ClCG03G008910 Citrullus lanatus HOM05D004520 ORTHO05D005520 2.0e-17 94.0 66 63.6
Sed0005622 Sechium edule HOM05D004520 ORTHO05D005520 2.0e-17 94.0 82 56.1
PGSC0003DMG400027533 Solanum tuberosum HOM05D004520 ORTHO05D005520 2.0e-17 94.0 100 50.0
CARHR071410 Cardamine hirsuta HOM05D004520 ORTHO05D005520 2.6e-17 93.6 90 51.1
ATR0564G398 Amborella trichopoda HOM05D004520 ORTHO05D005520 4.5e-17 92.8 59 71.2
Prupe.1G096600 Prunus persica HOM05D004520 ORTHO05D005520 4.5e-17 92.8 170 40.6
Solyc04g072650.1 Solanum lycopersicum HOM05D004520 ORTHO05D005520 4.5e-17 92.8 78 52.6
Actinidia10293 Actinidia chinensis HOM05D001087 ORTHO05D005520 1.0e-16 91.7 91 48.4
Sopen04g028850 Solanum pennellii HOM05D004520 ORTHO05D005520 1.3e-16 91.3 78 52.6
Migut.C00189 Erythranthe guttata HOM05D004520 ORTHO05D005520 6.5e-16 89.0 146 39.7
SalBow6G1129 Salvia bowleyana HOM05D004520 ORTHO05D005520 8.5e-16 88.6 101 44.6
SalBow6G4633 Salvia bowleyana HOM05D004520 ORTHO05D005520 8.5e-16 88.6 101 44.6
Rhsim06G0085800 Rhododendron simsii HOM05D004520 ORTHO05D005520 1.1e-15 88.2 135 42.2
Cpa.g.sc66.103 Carica papaya HOM05D004520 ORTHO05D005520 4.2e-15 86.3 65 61.5
CSS0031359 Camellia sinensis var. sinensis HOM05D004520 ORTHO05D005520 5.5e-15 85.9 243 30.0
Aqoxy6G00530 Aquilegia oxysepala HOM05D004520 ORTHO05D005520 7.2e-15 85.5 143 42.0
TPR.G34 Trifolium pratense HOM05D004520 ORTHO05D005520 9.4e-15 85.1 67 61.2
Phvul.009G027500 Phaseolus vulgaris HOM05D004520 ORTHO05D005520 2.1e-14 84.0 65 63.1
CSS0017832 Camellia sinensis var. sinensis HOM05D004520 ORTHO05D005520 6.1e-14 82.4 243 29.6
MELO3C022816.2 Cucumis melo HOM05D004520 ORTHO05D005520 6.1e-14 82.4 144 37.5
CsaV3_5G023810 Cucumis sativus L. HOM05D004520 ORTHO05D005520 7.9e-14 82.0 144 37.5
SalBow7G1906 Salvia bowleyana HOM05D004520 ORTHO05D005520 1.8e-13 80.9 139 36.7
AL2G38200 Arabidopsis lyrata HOM05D004520 ORTHO05D005520 2.3e-13 80.5 110 42.7
MD15G1409900 Malus domestica HOM05D004520 ORTHO05D005520 3.0e-13 80.1 107 46.7
Lsat_1_v5_gn_9_44740 Lactuca sativa HOM05D004520 ORTHO05D005520 8.8e-13 78.6 175 34.9
AT1G77932 Arabidopsis thaliana HOM05D004520 ORTHO05D005520 1.1e-12 78.2 82 52.4
Haze_00560 Corylus avellana HOM05D004520 ORTHO05D005520 1.1e-12 78.2 123 41.5
Haze_00569 Corylus avellana HOM05D004520 ORTHO05D005520 1.1e-12 78.2 123 41.5
Carub.0002s2483 Capsella rubella HOM05D004520 ORTHO05D005520 2.0e-12 77.4 65 63.1
Sp1g19610 Schrenkiella parvula HOM05D004520 ORTHO05D005520 3.3e-12 76.6 114 40.4
CAN.G535.13 Capsicum annuum HOM05D004520 ORTHO05D005520 1.3e-11 74.7 48 64.6
Atru.chr3.816 Acer truncatum HOM05D004520 ORTHO05D005520 2.8e-11 73.6 159 37.7
Cfa015930 Carpinus fangiana HOM05D004520 ORTHO05D005520 3.7e-11 73.2 111 41.4
SGA_v2.0_scaffold315G48386 Striga asiatica HOM05D004520 ORTHO05D005520 6.3e-11 72.4 63 55.6
A08p28610 Brassica napus HOM05D003425 ORTHO05D003897 1.8e-10 70.9 114 39.5
BraA08t34791Z Brassica rapa HOM05D003425 ORTHO05D003897 1.8e-10 70.9 114 39.5
QL12p035728 Quercus lobata HOM05D004520 ORTHO05D005520 1.8e-10 70.9 102 42.2
Dinv13052 Davidia involucrata HOM05D004520 ORTHO05D005520 4.1e-10 69.7 133 36.1
Lj4P108T23 Lonicera japonica HOM05D004520 ORTHO05D005520 5.3e-10 69.3 93 41.9
PGSC0003DMG400046169 Solanum tuberosum HOM05D004520 ORTHO05D005520 5.3e-10 69.3 106 40.6
SEGI_20648 Sequoiadendron giganteum HOM05D004520 ORTHO05D005520 7.0e-10 68.9 95 44.2
TAR381G0361 Trochodendron aralioides HOM05D004520 ORTHO05D005520 7.0e-10 68.9 62 58.1
Dinv44734 Davidia involucrata HOM05D001087 ORTHO05D001846 1.6e-09 67.8 119 38.7
C08p21380 Brassica napus HOM05D003425 ORTHO05D003897 2.6e-09 67.0 114 38.6
unitig_0.g1476 Utricularia gibba HOM05D000020 ORTHO05D000543 4.5e-09 66.2 75 41.3
ClCG03G008900 Citrullus lanatus HOM05D004520 ORTHO05D005520 5.9e-09 65.9 137 34.3
MELO3C022817.2 Cucumis melo HOM05D004520 ORTHO05D005520 7.7e-09 65.5 100 39.0
CsaV3_5G023830 Cucumis sativus L. HOM05D004520 ORTHO05D005520 1.0e-08 65.1 108 41.7
Glyma.12G185600 Glycine max HOM05D004622 ORTHO05D005431 2.2e-08 63.9 100 38.0
THA.LOC104816921 Tarenaya hassleriana HOM05D004520 ORTHO05D005520 1.9e-07 60.8 104 38.5
Glyma.13G315900 Glycine max HOM05D004622 ORTHO05D005431 2.5e-07 60.5 100 36.0
Oeu061390.1 Olea europaea HOM05D004520 ORTHO05D005520 4.2e-07 59.7 42 57.1
Glyma.04G106800 Glycine max HOM05D016564 ORTHO05D019006 7.2e-07 58.9 80 46.2
Phvul.005G123200 Phaseolus vulgaris HOM05D004622 ORTHO05D005431 9.4e-07 58.5 123 32.5
RcHm_v2.0_Chr3g0453941 Rosa chinensis HOM05D006966 ORTHO05D008111 1.2e-06 58.2 114 36.8
VMungo1080G1565 Vigna mungo HOM05D004622 ORTHO05D005431 1.2e-06 58.2 196 25.5
Cc01_g09000 Coffea canephora HOM05D004622 ORTHO05D005431 1.6e-06 57.8 112 36.6
Rhsim01G0204900 Rhododendron simsii HOM05D004622 ORTHO05D005431 1.6e-06 57.8 98 37.8
CAN.G689.16 Capsicum annuum HOM05D004520 ORTHO05D005520 2.1e-06 57.4 64 48.4
Ca_01655_v3 Cicer arietinum L. HOM05D004622 ORTHO05D005431 3.6e-06 56.6 64 43.8
SMO137G0033 Selaginella moellendorffii HOM05D028425 ORTHO05D005520 6.1e-06 55.8 73 43.8
ECA232G0105 Erigeron canadensis HOM05D004520 ORTHO05D005520 8.0e-06 55.5 69 44.9


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