Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 5.7e-242 840.5 426 100.0
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 3.5e-167 592.0 403 73.2
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 1.5e-165 586.6 426 71.4
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 9.4e-160 567.4 491 61.1
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 2.0e-154 549.7 428 66.6
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.1e-151 539.7 422 67.8
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 3.6e-151 538.9 450 65.1
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 2.6e-149 532.7 422 66.8
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 4.8e-148 528.5 449 63.3
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 6.3e-148 528.1 411 66.9
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 1.8e-147 526.6 433 64.7
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 1.5e-146 523.5 438 66.2
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 2.6e-146 522.7 431 64.5
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 4.5e-146 521.9 431 65.4
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 2.2e-145 519.6 410 64.9
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.4e-144 516.9 409 65.8
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 2.5e-144 516.2 423 63.1
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 1.0e-142 510.8 367 70.0
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.8e-142 510.0 370 70.0
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 1.1e-141 507.3 368 70.4
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 5.7e-141 505.0 489 56.2
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.4e-141 504.6 365 70.4
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 2.2e-140 503.1 434 60.8
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 2.2e-140 503.1 344 70.9
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.0e-138 496.5 388 67.8
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 5.9e-138 495.0 427 59.3
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 7.7e-138 494.6 337 72.1
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 3.8e-137 492.3 434 61.1
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 3.2e-136 489.2 409 61.6
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 5.5e-136 488.4 357 69.2
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 6.1e-135 485.0 427 61.6
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.0e-134 484.2 432 59.7
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 5.2e-134 481.9 432 59.3
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 1.5e-133 480.3 312 72.1
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 5.7e-133 478.4 381 63.5
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 5.7e-133 478.4 315 71.7
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 1.3e-132 477.2 433 58.0
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 1.3e-132 477.2 344 68.6
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.8e-132 476.1 330 70.3
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 6.3e-132 474.9 430 59.3
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 1.1e-131 474.2 424 59.9
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.1e-131 472.6 304 74.7
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 5.3e-131 471.9 314 72.0
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.3e-131 471.9 370 66.8
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 1.6e-130 470.3 333 69.4
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 2.0e-130 469.9 362 64.9
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.3e-129 467.2 348 66.7
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 1.7e-129 466.8 363 63.9
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.7e-129 466.8 431 57.8
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 2.9e-129 466.1 430 57.7
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 3.8e-129 465.7 455 55.6
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 1.1e-128 464.2 310 72.6
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.9e-128 463.4 324 69.1
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 1.9e-128 463.4 418 58.6
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 1.9e-128 463.4 403 60.3
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 2.5e-128 463.0 413 59.3
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 2.1e-127 459.9 321 68.5
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 3.6e-127 459.1 433 57.3
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 4.7e-127 458.8 324 70.7
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 8.0e-127 458.0 316 69.6
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.8e-126 456.8 421 57.5
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.8e-126 456.8 318 70.8
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 2.3e-126 456.4 319 69.9
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 3.0e-126 456.1 432 55.6
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 1.5e-125 453.8 327 69.7
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.0e-125 453.4 327 68.8
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 9.8e-125 451.1 303 71.6
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 2.8e-124 449.5 424 57.5
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.3e-124 448.0 330 67.3
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 1.4e-123 447.2 312 67.6
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 1.8e-123 446.8 346 64.5
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.7e-122 443.0 328 67.4
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 3.5e-122 442.6 324 68.8
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 7.7e-122 441.4 357 62.7
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 2.9e-121 439.5 325 66.5
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 5.0e-121 438.7 326 66.3
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 1.5e-120 437.2 309 65.7
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 5.5e-120 435.3 320 65.0
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 1.2e-119 434.1 428 56.1
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.0e-118 431.0 324 65.4
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 8.9e-118 427.9 287 73.9
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 3.4e-117 426.0 290 70.0
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 1.7e-116 423.7 424 54.5
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 2.8e-116 422.9 320 63.8
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 1.4e-115 420.6 411 53.5
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 4.1e-115 419.1 314 65.3
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 9.2e-115 417.9 336 65.5
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 2.9e-113 412.9 336 65.2
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 8.9e-110 401.4 288 68.4
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 5.4e-107 392.1 294 64.6
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 2.0e-106 390.2 517 46.6
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 5.0e-105 385.6 293 61.8
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 2.5e-104 383.3 257 68.9
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.3e-104 382.9 385 53.0
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.2e-99 366.3 330 58.5
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 2.1e-98 363.6 256 67.6
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 3.0e-89 333.2 470 47.2
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 1.9e-83 313.9 194 75.3
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 4.2e-83 312.8 320 53.8
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 7.3e-80 302.0 325 53.5
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 3.5e-74 283.1 277 56.3
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.7e-73 280.8 297 45.1
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 3.0e-73 280.0 207 67.1
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.3e-71 274.6 277 53.1
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.7e-68 264.2 362 42.3
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 1.1e-67 261.5 190 64.7
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 6.0e-66 255.8 280 52.9
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.7e-63 246.5 262 54.6
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 3.7e-55 219.9 143 72.7
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.5e-53 214.5 241 45.6
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 2.2e-52 210.7 184 51.6
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 2.5e-51 207.2 290 41.4
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 6.7e-49 199.1 203 54.2
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 3.4e-45 186.8 195 53.8
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.3e-41 174.1 186 50.5
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 6.9e-38 162.5 146 53.4
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 2.0e-37 161.0 111 66.7
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 4.8e-31 139.8 168 47.6
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 2.4e-30 137.5 196 40.3
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 8.5e-28 129.0 91 63.7
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.9e-27 127.9 200 42.0
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 1.2e-26 125.2 197 44.7
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 1.0e-25 122.1 156 45.5
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.3e-23 115.2 211 37.0
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 1.1e-22 112.1 110 50.9
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 1.1e-22 112.1 78 71.8
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 3.1e-22 110.5 192 41.1
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 5.3e-22 109.8 312 29.2
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.7e-20 104.8 68 75.0
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 6.5e-20 102.8 59 81.4
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 2.5e-19 100.9 310 27.7
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 5.5e-19 99.8 59 78.0
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 7.2e-19 99.4 189 33.3
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 2.7e-18 97.4 63 74.6
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 4.0e-17 93.6 107 48.6
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 5.2e-17 93.2 104 53.8
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 7.5e-16 89.4 248 28.2
SMO118G0092 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 4.8e-15 86.7 300 26.7
SMO263G0001 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 2.4e-14 84.3 269 25.3
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 1.2e-13 82.0 70 60.0
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 7.7e-13 79.3 312 25.6
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 1.0e-12 79.0 260 26.2
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 8.5e-12 75.9 56 64.3
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 3.2e-11 73.9 254 26.8
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 2.3e-09 67.8 319 23.8
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 5.2e-09 66.6 65 44.6


User provided reference genes

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