Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G194600 Carya illinoinensis HOM05D009400 ORTHO05D011360 1.5e-18 95.1 46 100.0
Prupe.1G329400 Prunus persica HOM05D009400 ORTHO05D011360 4.6e-12 73.6 50 76.0
MD16G1023500 Malus domestica HOM05D009400 ORTHO05D011360 3.0e-11 70.9 50 74.0
RcHm_v2.0_Chr4g0441831 Rosa chinensis HOM05D009400 ORTHO05D011360 8.6e-11 69.3 51 68.6
Manes.17G080050 Manihot esculenta HOM05D009400 ORTHO05D011360 1.9e-10 68.2 47 72.3
Potri.008G131550 Populus trichocarpa HOM05D009400 ORTHO05D011360 2.5e-10 67.8 47 72.3
Manes.15G130650 Manihot esculenta HOM05D009400 ORTHO05D011360 5.6e-10 66.6 47 70.2
MELO3C005300.2 Cucumis melo HOM05D009400 ORTHO05D011360 9.5e-10 65.9 45 73.3
Potri.010G110850 Populus trichocarpa HOM05D009400 ORTHO05D011360 6.2e-09 63.2 48 70.8
Sed0020145 Sechium edule HOM05D009400 ORTHO05D011360 8.1e-09 62.8 47 66.0
Thecc.02G287100 Theobroma cacao HOM05D009400 ORTHO05D011360 1.1e-08 62.4 47 70.2
Lj4g0020410 Lotus japonicus HOM05D009400 ORTHO05D011360 1.4e-08 62.0 52 69.2
Gohir.A12G150900 Gossypium hirsutum HOM05D009400 ORTHO05D011360 1.5e-07 58.5 43 65.1
Gohir.D12G154700 Gossypium hirsutum HOM05D009400 ORTHO05D011360 1.5e-07 58.5 43 65.1
Gorai.008G167100 Gossypium raimondii HOM05D009400 ORTHO05D011360 1.5e-07 58.5 43 65.1
Gohir.D01G143700 Gossypium hirsutum HOM05D009400 ORTHO05D011360 2.6e-07 57.8 47 66.0
Gorai.002G177200 Gossypium raimondii HOM05D009400 ORTHO05D011360 2.6e-07 57.8 47 66.0
Gohir.A01G150400 Gossypium hirsutum HOM05D009400 ORTHO05D011360 1.7e-06 55.1 47 63.8
Phvul.003G031801 Phaseolus vulgaris HOM05D009400 ORTHO05D011360 1.7e-06 55.1 46 63.0
Gorai.005G159600 Gossypium raimondii HOM05D009400 ORTHO05D011360 2.9e-06 54.3 50 60.0
Phvul.003G027801 Phaseolus vulgaris HOM05D009400 ORTHO05D011360 3.8e-06 53.9 46 63.0
Glyma.08G095950 Glycine max HOM05D009400 ORTHO05D011360 8.4e-06 52.8 46 60.9


User provided reference genes

Program Settings