Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G172300 Carya illinoinensis HOM05D006667 ORTHO05D008387 9.7e-146 520.8 413 100.0
QL03p045401 Quercus lobata HOM05D006667 ORTHO05D008387 6.4e-105 385.2 404 83.9
Prupe.1G349400 Prunus persica HOM05D006667 ORTHO05D008387 5.4e-104 382.1 403 80.1
Dinv07500 Davidia involucrata HOM05D006667 ORTHO05D008387 3.0e-102 376.3 402 82.3
Rhsim12G0089400 Rhododendron simsii HOM05D006667 ORTHO05D008387 5.1e-102 375.6 405 77.5
Actinidia04346 Actinidia chinensis HOM05D006667 ORTHO05D008387 1.5e-101 374.0 406 77.6
Sabra05G0073100 Salix brachista HOM05D006667 ORTHO05D008387 4.0e-99 365.9 399 77.4
THA.LOC104819372 Tarenaya hassleriana HOM05D006667 ORTHO05D008387 4.0e-99 365.9 406 81.0
FvH4_4g37160 Fragaria vesca HOM05D006667 ORTHO05D008387 7.1e-96 355.1 408 76.0
FAN12G3199 Fragaria x ananassa HOM05D006667 ORTHO05D008387 1.6e-95 354.0 408 75.7
Potri.005G088800 Populus trichocarpa HOM05D006667 ORTHO05D008387 2.1e-95 353.6 404 75.5
TAR622G0133 Trochodendron aralioides HOM05D006667 ORTHO05D008387 2.3e-94 350.1 401 76.1
Medtr1g114610 Medicago truncatula HOM05D006667 ORTHO05D008387 3.0e-94 349.7 404 75.0
Cfa008778 Carpinus fangiana HOM05D006667 ORTHO05D008387 6.6e-94 348.6 415 74.5
AL6G34600 Arabidopsis lyrata HOM05D006667 ORTHO05D008387 1.5e-93 347.4 404 79.5
Psat6g234200 Pisum sativum HOM05D006667 ORTHO05D008387 1.9e-93 347.1 404 74.0
RcHm_v2.0_Chr4g0446961 Rosa chinensis HOM05D006667 ORTHO05D008387 1.9e-93 347.1 402 76.4
CSS0023228 Camellia sinensis var. sinensis HOM05D006667 ORTHO05D008387 2.5e-93 346.7 404 78.7
Gorai.008G147100 Gossypium raimondii HOM05D006667 ORTHO05D008387 2.5e-93 346.7 406 78.8
VMungo0720G1985 Vigna mungo HOM05D006667 ORTHO05D008387 5.6e-93 345.5 404 73.0
Sabra07G0063900 Salix brachista HOM05D006667 ORTHO05D008387 1.2e-92 344.4 464 61.6
Gohir.D12G135900 Gossypium hirsutum HOM05D006667 ORTHO05D008387 3.6e-92 342.8 402 79.1
PGSC0003DMG400011513 Solanum tuberosum HOM05D006667 ORTHO05D008387 4.7e-92 342.4 401 73.8
CsaV3_5G029020 Cucumis sativus L. HOM05D006667 ORTHO05D008387 6.2e-92 342.0 402 74.6
BraA06t26360Z Brassica rapa HOM05D006667 ORTHO05D008387 1.1e-91 341.3 404 77.2
MELO3C011757.2 Cucumis melo HOM05D006667 ORTHO05D008387 1.1e-91 341.3 402 74.6
arahy.Tifrunner.gnm1.ann1.IH6UK4 Arachis hypogaea HOM05D006667 ORTHO05D008387 2.4e-91 340.1 405 73.3
Hund24389 Selenicereus undatus HOM05D006667 ORTHO05D008387 2.4e-91 340.1 405 78.0
TWI74G1436 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 3.1e-91 339.7 403 79.2
Cpa.g.sc60.94 Carica papaya HOM05D006667 ORTHO05D008387 5.2e-91 339.0 398 77.1
Thhalv10004329m.g Eutrema salsugineum HOM05D006667 ORTHO05D008387 6.8e-91 338.6 404 78.2
Peaxi162Scf00681g00319 Petunia axillaris HOM05D006667 ORTHO05D008387 6.8e-91 338.6 406 75.1
Lj5g0023243 Lotus japonicus HOM05D006667 ORTHO05D008387 2.6e-90 336.7 400 74.2
C02p60910 Brassica napus HOM05D006667 ORTHO05D008387 9.9e-90 334.7 404 73.3
BcaC03g18029 Brassica carinata HOM05D006667 ORTHO05D008387 1.3e-89 334.3 404 73.3
Manes.04G162700 Manihot esculenta HOM05D006667 ORTHO05D008387 1.3e-89 334.3 406 77.3
A02p41020 Brassica napus HOM05D006667 ORTHO05D008387 1.7e-89 334.0 404 74.3
Aqoxy3G04313 Aquilegia oxysepala HOM05D006667 ORTHO05D008387 4.9e-89 332.4 402 69.9
Nitab4.5_0004979g0060 Nicotiana tabacum HOM05D006667 ORTHO05D008387 6.4e-89 332.0 406 76.4
Sed0011343 Sechium edule HOM05D006667 ORTHO05D008387 1.1e-88 331.3 402 77.1
Solyc04g008980.3 Solanum lycopersicum HOM05D006667 ORTHO05D008387 1.4e-88 330.9 401 76.8
Hma1.2p1_0044F.1_g026320 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 1.9e-88 330.5 402 76.9
Thecc.02G154400 Theobroma cacao HOM05D006667 ORTHO05D008387 2.4e-88 330.1 403 78.2
CANSAT78G2402 Cannabis sativa HOM05D006667 ORTHO05D008387 3.2e-88 329.7 406 73.6
Lalb_Chr02g0143651 Lupinus albus HOM05D006667 ORTHO05D008387 3.2e-88 329.7 404 73.0
BraA02t09050Z Brassica rapa HOM05D006667 ORTHO05D008387 4.2e-88 329.3 404 74.0
Sopen04g004160 Solanum pennellii HOM05D006667 ORTHO05D008387 4.2e-88 329.3 401 76.8
ClCG02G014160 Citrullus lanatus HOM05D006667 ORTHO05D008387 2.7e-87 326.6 402 76.4
Aa31LG11G2790 Aethionema arabicum HOM05D006667 ORTHO05D008387 3.5e-87 326.2 404 72.8
AT5G23340 Arabidopsis thaliana HOM05D006667 ORTHO05D008387 6.0e-87 325.5 404 77.5
arahy.Tifrunner.gnm1.ann1.F8B6JQ Arachis hypogaea HOM05D006667 ORTHO05D008387 6.0e-87 325.5 393 73.5
EL10Ac9g22983 Beta vulgaris HOM05D006667 ORTHO05D008387 6.0e-87 325.5 403 77.2
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 6.0e-87 325.5 404 72.5
Sed0022119 Sechium edule HOM05D006667 ORTHO05D008387 6.0e-87 325.5 404 74.5
MBI06_g27487_MAGBIO Magnolia biondii HOM05D006667 ORTHO05D008387 1.0e-86 324.7 397 75.8
BolC7t44948H Brassica oleracea HOM05D006667 ORTHO05D008387 1.7e-86 323.9 404 75.7
CARHR190200 Cardamine hirsuta HOM05D006667 ORTHO05D008387 6.6e-86 322.0 404 72.5
Migut.L00803 Erythranthe guttata HOM05D006667 ORTHO05D008387 6.6e-86 322.0 404 74.3
A06p34280 Brassica napus HOM05D006667 ORTHO05D008387 1.9e-85 320.5 404 75.5
Atru.chr11.1242 Acer truncatum HOM05D006667 ORTHO05D008387 2.5e-85 320.1 403 72.2
Lj6A708T61 Lonicera japonica HOM05D006667 ORTHO05D008387 7.3e-85 318.5 404 72.0
Lj6A713T75 Lonicera japonica HOM05D006667 ORTHO05D008387 7.3e-85 318.5 404 72.0
PGR142G2507 Punica granatum HOM05D006667 ORTHO05D008387 9.6e-85 318.2 407 75.7
CAN.G274.16 Capsicum annuum HOM05D006667 ORTHO05D008387 6.2e-84 315.5 400 76.0
Glyma.20G102500 Glycine max HOM05D006667 ORTHO05D008387 6.2e-84 315.5 404 75.0
Nitab4.5_0005997g0030 Nicotiana tabacum HOM05D006667 ORTHO05D008387 3.1e-83 313.2 406 73.9
Carub.0006s2112 Capsella rubella HOM05D006667 ORTHO05D008387 3.4e-82 309.7 404 75.0
DCAR_002607 Daucus carota HOM05D006667 ORTHO05D008387 1.3e-81 307.8 402 69.9
Ciclev10033734m.g Citrus clementina HOM05D006667 ORTHO05D008387 6.4e-81 305.4 403 69.2
Glyma.10G286600 Glycine max HOM05D006667 ORTHO05D008387 6.4e-81 305.4 407 69.8
Sc10g0006700 Simmondsia chinensis HOM05D006667 ORTHO05D008387 4.2e-80 302.8 401 70.8
TPR.G4129 Trifolium pratense HOM05D006667 ORTHO05D008387 1.6e-79 300.8 404 70.3
BcaB07g29860 Brassica carinata HOM05D006667 ORTHO05D008387 3.5e-79 299.7 404 74.3
SalBow2G2931 Salvia bowleyana HOM05D006667 ORTHO05D008387 1.0e-78 298.1 401 70.3
Sp2g23820 Schrenkiella parvula HOM05D006667 ORTHO05D008387 3.9e-78 296.2 404 69.3
AUR62032948 Chenopodium quinoa HOM05D006667 ORTHO05D008387 2.8e-76 290.0 405 68.9
MSTRG.8092 Avicennia marina HOM05D006667 ORTHO05D008387 4.8e-76 289.3 402 71.4
Ca_11261_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 1.4e-75 287.7 404 69.1
Hma1.2p1_0044F.1_g026310 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 4.0e-75 286.2 432 55.6
Haze_11790 Corylus avellana HOM05D006667 ORTHO05D008387 7.6e-74 282.0 411 69.1
Zm00001eb185570 Zea mays HOM05D006667 ORTHO05D008387 1.7e-73 280.8 398 62.3
unitig_749.g13342 Utricularia gibba HOM05D006667 ORTHO05D008387 1.1e-72 278.1 402 65.7
vmacro15997 Vaccinium macrocarpon HOM05D006667 ORTHO05D008387 7.1e-72 275.4 535 50.7
Ah.03g147880 Amaranthus hybridus HOM05D006667 ORTHO05D008387 1.3e-70 271.2 413 59.6
Eucgr.G02589 Eucalyptus grandis HOM05D006667 ORTHO05D008387 1.1e-67 261.5 401 70.1
COL.COLO4_33111 Corchorus olitorius HOM05D006667 ORTHO05D008387 2.4e-67 260.4 402 71.4
SGA_v2.0_scaffold80G25957 Striga asiatica HOM05D006667 ORTHO05D008387 2.9e-65 253.4 410 65.9
CDE04G2906 Ceratophyllum demersum HOM05D006667 ORTHO05D008387 1.9e-64 250.8 397 69.0
TWI53G1716 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 7.1e-64 248.8 403 71.5
PSO017G3027 Papaver somniferum HOM05D006667 ORTHO05D008387 7.9e-63 245.4 406 69.2
ECA246G5028 Erigeron canadensis HOM05D002605 ORTHO05D002842 1.0e-62 245.0 396 71.0
Lsat_1_v5_gn_3_34481 Lactuca sativa HOM05D006667 ORTHO05D008387 1.6e-60 237.7 400 69.8
HanXRQChr17g0541041 Helianthus annuus HOM05D006667 ORTHO05D008387 1.2e-58 231.5 403 69.0
AUR62017733 Chenopodium quinoa HOM05D006667 ORTHO05D008387 6.1e-55 219.2 414 54.3
Oeu027930.1 Olea europaea HOM05D006667 ORTHO05D008387 1.9e-53 214.2 406 65.8
Gohir.A12G132300 Gossypium hirsutum HOM05D006667 ORTHO05D008387 2.8e-52 210.3 183 67.8
HanXRQChr06g0171711 Helianthus annuus HOM05D006667 ORTHO05D008387 6.1e-47 192.6 396 64.6
Phvul.007G014200 Phaseolus vulgaris HOM05D006667 ORTHO05D008387 7.9e-47 192.2 184 62.5
Os02g0636400 Oryza sativa ssp. japonica HOM05D006667 ORTHO05D008387 6.7e-46 189.1 180 55.6
SEGI_01489 Sequoiadendron giganteum HOM05D006667 ORTHO05D008387 1.1e-43 181.8 397 61.2
Nn3g18579 Nelumbo nucifera HOM05D006667 ORTHO05D008387 3.1e-43 180.3 401 64.1
PSO170G5099 Papaver somniferum HOM05D006667 ORTHO05D008387 2.0e-42 177.6 406 63.1
Ca_11262_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 2.7e-39 167.2 181 48.6
arahy.Tifrunner.gnm1.ann1.6XP1A8 Arachis hypogaea HOM05D006667 ORTHO05D008387 5.3e-35 152.9 109 67.0
arahy.Tifrunner.gnm1.ann1.RI7T4X Arachis hypogaea HOM05D006667 ORTHO05D008387 5.3e-35 152.9 109 67.0
ATR0618G066 Amborella trichopoda HOM05D006667 ORTHO05D008387 9.1e-35 152.1 398 60.1
Dinv17648 Davidia involucrata HOM05D006667 ORTHO05D008387 4.5e-34 149.8 152 57.2
HPP92_025485 Vanilla planifolia HOM05D006667 ORTHO05D008387 7.2e-32 142.5 109 62.4
Potri.007G075600 Populus trichocarpa HOM05D006667 ORTHO05D008387 1.6e-31 141.4 396 42.4
arahy.Tifrunner.gnm1.ann1.ALJ85P Arachis hypogaea HOM05D006667 ORTHO05D008387 3.0e-30 137.1 103 67.0
SMO116G0353 Selaginella moellendorffii HOM05D006667 ORTHO05D008387 4.4e-29 133.3 109 58.7
arahy.Tifrunner.gnm1.ann1.L6WSTP Arachis hypogaea HOM05D006667 ORTHO05D008387 2.8e-28 130.6 93 68.8
Medtr7g010500 Medicago truncatula HOM05D006667 ORTHO05D008387 4.8e-20 103.2 74 64.9
BcaC04g21805 Brassica carinata HOM05D006667 ORTHO05D008387 9.2e-11 72.4 74 68.9
C06p28130 Brassica napus HOM05D006667 ORTHO05D008387 3.3e-08 63.9 89 56.2
Ah.08g209960 Amaranthus hybridus HOM05D002125 ORTHO05D002105 5.6e-08 63.2 181 26.0
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 9.5e-08 62.4 140 30.7
Cfa011788 Carpinus fangiana HOM05D002125 ORTHO05D002105 1.2e-07 62.0 175 27.4
MBI04_g25313_MAGBIO Magnolia biondii HOM05D001818 ORTHO05D001780 1.6e-07 61.6 163 28.2
Nn2g11037 Nelumbo nucifera HOM05D002125 ORTHO05D002105 2.8e-07 60.8 151 27.8
CANSAT54G1695 Cannabis sativa HOM05D002125 ORTHO05D002105 3.6e-07 60.5 164 26.8
BolC6t37979H Brassica oleracea HOM05D006667 ORTHO05D008387 4.7e-07 60.1 89 55.1
C09p27300 Brassica napus HOM05D006667 ORTHO05D008387 8.0e-07 59.3 142 43.0
QL01p025894 Quercus lobata HOM05D002125 ORTHO05D002105 8.0e-07 59.3 151 27.8
ClCG02G019190 Citrullus lanatus HOM05D002125 ORTHO05D002105 1.0e-06 58.9 159 26.4
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 1.0e-06 58.9 97 30.9
CDE07G0417 Ceratophyllum demersum HOM05D001818 ORTHO05D001780 1.4e-06 58.5 155 25.2
Haze_04113 Corylus avellana HOM05D002125 ORTHO05D002105 1.4e-06 58.5 98 32.7
MBI19_g11829_MAGBIO Magnolia biondii HOM05D003317 ORTHO05D003696 1.4e-06 58.5 211 23.7
EL10Ac7g16789 Beta vulgaris HOM05D002125 ORTHO05D002105 3.0e-06 57.4 151 26.5
Cfa006657 Carpinus fangiana HOM05D002125 ORTHO05D002105 3.0e-06 57.4 154 26.6
Glyma.14G200300 Glycine max HOM05D002125 ORTHO05D002105 4.0e-06 57.0 156 29.5
Pp3c10_8230 Physcomitrium patens HOM05D006667 ORTHO05D008387 5.2e-06 56.6 63 49.2
Ah.15g090380 Amaranthus hybridus HOM05D002125 ORTHO05D002105 8.9e-06 55.8 150 28.0
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 8.9e-06 55.8 141 29.1


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