Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 1.3e-157 560.8 618 100.0
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 6.6e-114 415.6 624 87.2
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 1.6e-96 357.8 623 84.4
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 6.9e-87 325.9 623 82.0
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 2.6e-86 323.9 615 80.5
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 2.9e-85 320.5 635 79.7
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 1.8e-82 311.2 624 78.0
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 2.3e-82 310.8 621 79.1
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 1.9e-81 307.8 622 78.8
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 5.6e-81 306.2 622 79.4
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 6.2e-80 302.8 619 76.4
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 6.2e-80 302.8 619 76.4
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 8.1e-80 302.4 620 79.4
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 1.8e-79 301.2 620 79.8
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 5.3e-79 299.7 619 80.5
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 5.3e-79 299.7 619 80.5
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 4.2e-76 290.0 618 77.2
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 7.1e-76 289.3 618 77.0
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 9.3e-76 288.9 618 77.3
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.6e-75 288.1 621 78.6
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 2.7e-75 287.3 620 78.2
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 4.6e-75 286.6 621 79.7
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 7.9e-75 285.8 620 78.7
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 2.3e-74 284.3 620 78.5
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 3.9e-74 283.5 618 78.0
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 4.3e-73 280.0 619 75.8
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 5.7e-73 279.6 632 77.2
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 2.1e-72 277.7 618 75.9
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 3.7e-72 276.9 624 75.6
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 4.8e-72 276.6 621 78.7
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 6.2e-72 276.2 620 76.9
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 2.4e-71 274.2 629 74.9
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 1.2e-70 271.9 624 78.4
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 1.2e-70 271.9 624 77.9
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 1.2e-70 271.9 657 63.3
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 2.6e-70 270.8 620 78.4
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 3.8e-69 266.9 620 75.0
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 6.5e-69 266.2 626 59.1
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 7.1e-68 262.7 556 82.2
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 2.1e-67 261.2 621 77.5
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 3.5e-67 260.4 623 67.9
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 7.9e-67 259.2 616 78.2
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 3.9e-66 256.9 623 64.8
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 5.1e-66 256.5 626 72.2
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 1.5e-65 255.0 621 76.0
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 1.9e-65 254.6 630 74.0
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 1.9e-65 254.6 619 78.0
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 1.9e-65 254.6 642 70.1
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 2.5e-65 254.2 248 59.3
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 5.7e-65 253.1 618 77.2
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 3.7e-64 250.4 627 72.4
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 4.8e-64 250.0 619 74.6
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 1.8e-63 248.1 565 80.2
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 5.3e-63 246.5 620 75.2
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 2.6e-62 244.2 546 84.1
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 1.0e-61 242.3 624 75.0
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 1.3e-61 241.9 618 75.4
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 1.7e-61 241.5 625 75.8
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 5.0e-61 240.0 617 77.3
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 4.2e-60 236.9 247 58.3
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 5.5e-60 236.5 618 76.7
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 2.7e-59 234.2 571 78.3
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 1.0e-58 232.3 619 75.9
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 1.4e-58 231.9 617 74.1
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 1.8e-58 231.5 621 75.8
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 1.8e-58 231.5 618 73.9
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 8.8e-58 229.2 621 76.2
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 4.3e-57 226.9 556 78.8
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 9.7e-57 225.7 624 75.0
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 4.8e-56 223.4 246 54.1
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 1.4e-55 221.9 248 54.4
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 6.9e-55 219.5 555 81.4
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 9.1e-55 219.2 625 71.0
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 1.2e-54 218.8 658 68.4
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 1.2e-54 218.8 577 75.7
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 1.2e-54 218.8 627 71.0
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 1.5e-54 218.4 619 75.0
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 1.5e-54 218.4 555 81.4
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 1.5e-54 218.4 555 81.4
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 2.6e-54 217.6 619 74.8
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 5.9e-54 216.5 266 52.3
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 7.7e-54 216.1 557 81.0
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 7.7e-54 216.1 557 81.0
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 7.7e-54 216.1 269 50.6
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 1.7e-53 214.9 530 84.0
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 3.8e-53 213.8 667 68.8
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 5.0e-53 213.4 630 74.1
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 7.2e-52 209.5 556 81.1
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 2.7e-51 207.6 226 54.9
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 3.6e-51 207.2 569 65.2
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 6.1e-51 206.5 471 91.3
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 7.9e-51 206.1 239 50.2
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 1.0e-50 205.7 632 71.0
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 1.0e-50 205.7 240 50.0
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 5.1e-50 203.4 485 87.8
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 7.4e-49 199.5 223 53.4
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 7.7e-46 189.5 223 51.1
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 3.8e-45 187.2 611 60.1
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 5.0e-45 186.8 621 71.8
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 8.5e-45 186.0 175 56.0
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 3.2e-44 184.1 556 72.8
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 6.7e-42 176.4 503 79.5
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 1.1e-41 175.6 220 48.6
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 9.1e-39 166.0 143 60.8
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.7e-37 161.8 192 54.2
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.7e-37 161.8 192 54.2
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 1.7e-37 161.8 574 69.2
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 3.6e-35 154.1 596 69.3
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 8.0e-35 152.9 552 73.9
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 4.4e-33 147.1 124 61.3
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 4.1e-31 140.6 184 47.8
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 1.0e-29 136.0 246 39.0
Hma1.2p1_2649F.1_g326137 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 9.1e-23 112.8 91 86.8
SEGI_23986 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 6.1e-19 100.1 569 67.3
vmacro16284 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 6.8e-18 96.7 183 38.8
TAR629G0016 Trochodendron aralioides HOM05D006250 ORTHO05D007107 2.0e-17 95.1 54 85.2
Lsat_1_v5_gn_4_84060 Lactuca sativa HOM05D006250 ORTHO05D007107 4.9e-16 90.5 64 68.8
AagrBONN_evm.TU.Sc2ySwM_344.3920 Anthoceros agrestis HOM05D006250 ORTHO05D007107 3.2e-15 87.8 163 36.2
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 5.9e-14 83.6 221 34.4
SEGI_34898 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 9.5e-12 76.3 84 71.4
SMO116G0024 Selaginella moellendorffii HOM05D006250 ORTHO05D007107 1.0e-10 72.8 67 52.2
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 1.3e-08 65.9 81 72.8
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 1.3e-08 65.9 81 72.8
Mapoly0090s0039 Marchantia polymorpha HOM05D006250 ORTHO05D007107 2.2e-08 65.1 157 35.0
CBR_g61650 Chara braunii HOM05D006250 ORTHO05D007107 7.8e-06 56.6 87 59.8


User provided reference genes

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