Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 1.8e-50 202.2 98 100.0
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 1.4e-39 166.0 96 83.3
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 1.4e-39 166.0 97 83.5
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 1.9e-39 165.6 98 78.6
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 9.4e-39 163.3 97 80.4
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 1.2e-38 162.9 98 78.6
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 2.1e-38 162.2 97 81.4
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 2.7e-38 161.8 98 79.6
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 2.7e-38 161.8 98 78.6
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 3.6e-38 161.4 98 77.6
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 4.6e-38 161.0 94 77.7
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 1.8e-37 159.1 97 80.4
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 3.9e-37 157.9 96 76.0
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 5.1e-37 157.5 98 79.6
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 5.1e-37 157.5 98 79.6
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 6.7e-37 157.1 98 78.6
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 6.7e-37 157.1 96 78.1
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 6.7e-37 157.1 97 75.3
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 8.8e-37 156.8 96 75.0
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 8.8e-37 156.8 98 73.5
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 1.1e-36 156.4 97 74.2
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 1.1e-36 156.4 93 78.5
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 1.5e-36 156.0 93 77.4
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 2.5e-36 155.2 93 78.5
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 5.7e-36 154.1 96 71.9
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 5.7e-36 154.1 97 77.3
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 9.7e-36 153.3 97 73.2
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 9.7e-36 153.3 97 73.2
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 9.7e-36 153.3 97 73.2
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 9.7e-36 153.3 97 73.2
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 9.7e-36 153.3 98 74.5
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.3e-35 152.9 93 76.3
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 1.3e-35 152.9 93 76.3
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 1.7e-35 152.5 100 79.0
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 1.7e-35 152.5 97 74.2
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 1.7e-35 152.5 95 76.8
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 2.2e-35 152.1 96 76.0
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 2.2e-35 152.1 96 71.9
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 2.2e-35 152.1 97 74.2
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 2.8e-35 151.8 97 73.2
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 2.8e-35 151.8 97 73.2
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 2.8e-35 151.8 97 73.2
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 3.7e-35 151.4 97 74.2
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 3.7e-35 151.4 102 73.5
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 4.8e-35 151.0 95 76.8
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 4.8e-35 151.0 97 76.3
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 6.3e-35 150.6 100 75.0
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 8.2e-35 150.2 93 75.3
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 8.2e-35 150.2 97 75.3
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.1e-34 149.8 95 75.8
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.1e-34 149.8 95 75.8
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 1.4e-34 149.4 98 74.5
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.4e-34 149.4 95 75.8
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.4e-34 149.4 95 75.8
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 1.4e-34 149.4 96 78.1
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 1.4e-34 149.4 96 78.1
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 1.8e-34 149.1 93 73.1
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 1.8e-34 149.1 97 72.2
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 1.8e-34 149.1 97 74.2
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 2.4e-34 148.7 93 75.3
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 3.1e-34 148.3 98 74.5
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 5.3e-34 147.5 97 71.1
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 5.3e-34 147.5 93 74.2
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 6.9e-34 147.1 96 77.1
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 9.1e-34 146.7 98 75.5
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 1.2e-33 146.4 94 75.5
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 1.5e-33 146.0 93 73.1
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 2.0e-33 145.6 98 74.5
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 2.0e-33 145.6 102 70.6
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 2.6e-33 145.2 96 68.8
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 4.5e-33 144.4 100 73.0
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 5.9e-33 144.1 93 72.0
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 5.9e-33 144.1 93 72.0
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 7.7e-33 143.7 93 68.8
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 7.7e-33 143.7 98 71.4
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 7.7e-33 143.7 97 72.2
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 2.2e-32 142.1 96 71.9
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 3.8e-32 141.4 93 71.0
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 3.8e-32 141.4 96 70.8
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 3.8e-32 141.4 96 70.8
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 5.0e-32 141.0 98 70.4
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 6.5e-32 140.6 98 69.4
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 1.9e-31 139.0 96 66.7
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 2.5e-31 138.7 99 69.7
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 4.2e-31 137.9 96 72.9
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 4.2e-31 137.9 94 69.1
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 7.2e-31 137.1 96 71.9
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 9.4e-31 136.7 96 67.7
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 1.6e-30 136.0 86 75.6
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 2.1e-30 135.6 101 69.3
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 3.6e-30 134.8 85 78.8
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 3.6e-30 134.8 85 78.8
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 3.6e-30 134.8 94 68.1
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 3.6e-30 134.8 93 68.8
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 6.1e-30 134.0 96 70.8
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 7.9e-30 133.7 94 69.1
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 1.0e-29 133.3 96 69.8
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 3.9e-29 131.3 93 71.0
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 6.7e-29 130.6 81 76.5
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 6.7e-29 130.6 100 65.0
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 2.6e-28 128.6 98 65.3
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 1.1e-26 123.2 96 63.5
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 1.4e-26 122.9 94 61.7
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 2.4e-26 122.1 89 66.3
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.4e-26 122.1 99 63.6
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 5.3e-26 120.9 95 61.1
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.6e-25 118.6 99 61.6
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 3.5e-25 118.2 102 60.8
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 3.8e-24 114.8 88 59.1
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 5.0e-24 114.4 79 68.4
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 1.1e-23 113.2 99 62.6
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 3.6e-22 108.2 89 59.6
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 8.0e-22 107.1 91 59.3
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.1e-20 103.2 91 53.8
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 1.5e-20 102.8 78 62.8
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 2.6e-20 102.1 69 75.4
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 7.4e-20 100.5 92 52.2
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 3.7e-19 98.2 99 50.5
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 3.1e-18 95.1 98 59.2
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 5.3e-18 94.4 100 52.0
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 4.5e-17 91.3 93 54.8
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 1.0e-16 90.1 94 55.3
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 1.7e-16 89.4 99 48.5
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 2.2e-16 89.0 100 50.0
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.1e-15 86.7 98 44.9
Cre10.g432100 Chlamydomonas reinhardtii HOM05D006087 ORTHO05D007479 1.4e-10 69.7 85 41.2
MD16G1189100 Malus domestica HOM05D006087 ORTHO05D007479 7.0e-10 67.4 45 64.4
Zm00001eb421040 Zea mays HOM05D006087 ORTHO05D007479 2.9e-08 62.0 101 40.6
CDE05G3495 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 5.5e-07 57.8 56 53.6
Oeu016235.1 Olea europaea HOM05D006087 ORTHO05D007479 5.5e-07 57.8 44 70.5
MCO04G324 Micromonas commoda HOM05D002522 ORTHO05D002744 2.7e-06 55.5 47 48.9


User provided reference genes

Program Settings