Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G073500 Carya illinoinensis HOM05D006147 ORTHO05D007501 4.4e-172 607.8 303 100.0
QL11p046465 Quercus lobata HOM05D006147 ORTHO05D007501 2.4e-165 585.5 302 94.7
Cfa005114 Carpinus fangiana HOM05D006147 ORTHO05D007501 2.6e-164 582.0 303 95.0
MD05G1055500 Malus domestica HOM05D006147 ORTHO05D007501 6.9e-157 557.4 302 89.4
RcHm_v2.0_Chr6g0267981 Rosa chinensis HOM05D006147 ORTHO05D007501 2.6e-156 555.4 303 89.4
FAN27G3378 Fragaria x ananassa HOM05D006147 ORTHO05D007501 3.4e-156 555.1 303 88.8
Prupe.8G083600 Prunus persica HOM05D006147 ORTHO05D007501 4.5e-156 554.7 302 89.4
COL.COLO4_26048 Corchorus olitorius HOM05D006147 ORTHO05D007501 9.9e-156 553.5 301 88.0
CSS0016386 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 2.2e-155 552.4 302 88.7
Gohir.A03G199400 Gossypium hirsutum HOM05D006147 ORTHO05D007501 3.8e-155 551.6 303 88.8
MD10G1062800 Malus domestica HOM05D006147 ORTHO05D007501 3.8e-155 551.6 302 89.4
Potri.009G124800 Populus trichocarpa HOM05D006147 ORTHO05D007501 8.4e-155 550.4 303 89.1
CSS0033675 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 1.4e-154 549.7 302 88.1
Manes.04G083100 Manihot esculenta HOM05D006147 ORTHO05D007501 1.4e-154 549.7 301 89.0
Cpa.g.sc150.15 Carica papaya HOM05D006147 ORTHO05D007501 1.9e-154 549.3 303 88.8
Sed0012779 Sechium edule HOM05D006147 ORTHO05D007501 1.9e-154 549.3 303 88.8
TWI31G1450 Tripterygium wilfordii HOM05D006147 ORTHO05D007501 3.2e-154 548.5 303 88.8
Gohir.D02G220700 Gossypium hirsutum HOM05D006147 ORTHO05D007501 1.2e-153 546.6 303 88.4
Thecc.02G074800 Theobroma cacao HOM05D006147 ORTHO05D007501 1.6e-153 546.2 302 87.7
Actinidia02248 Actinidia chinensis HOM05D006147 ORTHO05D007501 1.0e-152 543.5 302 88.4
Aqoxy6G02357 Aquilegia oxysepala HOM05D006147 ORTHO05D007501 2.3e-152 542.3 301 87.7
Medtr4g072040 Medicago truncatula HOM05D006147 ORTHO05D007501 3.0e-152 542.0 303 86.8
TAR628G0064 Trochodendron aralioides HOM05D006147 ORTHO05D007501 6.7e-152 540.8 302 86.4
Lalb_Chr03g0025341 Lupinus albus HOM05D006147 ORTHO05D007501 1.5e-151 539.7 303 87.1
Ciclev10028728m.g Citrus clementina HOM05D006147 ORTHO05D007501 1.9e-151 539.3 306 86.3
Sabra09G0095800 Salix brachista HOM05D006147 ORTHO05D007501 2.5e-151 538.9 312 85.9
VMungo1127G0575 Vigna mungo HOM05D006147 ORTHO05D007501 2.5e-151 538.9 303 87.1
Haze_02237 Corylus avellana HOM05D006147 ORTHO05D007501 4.3e-151 538.1 349 80.5
Psat7g138880 Pisum sativum HOM05D006147 ORTHO05D007501 9.6e-151 537.0 303 85.8
CsaV3_7G000410 Cucumis sativus L. HOM05D006147 ORTHO05D007501 1.3e-150 536.6 303 86.8
Eucgr.G01732 Eucalyptus grandis HOM05D006147 ORTHO05D007501 1.3e-150 536.6 301 86.4
Glyma.12G036900 Glycine max HOM05D006147 ORTHO05D007501 1.6e-150 536.2 303 85.8
Duzib248G0035 Durio zibethinus HOM05D006147 ORTHO05D007501 2.8e-150 535.4 343 78.7
Lj3g0027328 Lotus japonicus HOM05D006147 ORTHO05D007501 3.7e-150 535.0 303 86.5
PSO210G6769 Papaver somniferum HOM05D006147 ORTHO05D007501 4.8e-150 534.6 302 85.1
Atru.chr5.3146 Acer truncatum HOM05D006147 ORTHO05D007501 8.1e-150 533.9 303 85.1
CANSAT11G2690 Cannabis sativa HOM05D006147 ORTHO05D007501 3.1e-149 531.9 303 85.8
Phvul.011G038600 Phaseolus vulgaris HOM05D006147 ORTHO05D007501 3.1e-149 531.9 303 86.8
TPR.G28159 Trifolium pratense HOM05D006147 ORTHO05D007501 3.1e-149 531.9 303 85.1
arahy.Tifrunner.gnm1.ann1.JUX7JJ Arachis hypogaea HOM05D006147 ORTHO05D007501 6.9e-149 530.8 303 85.8
arahy.Tifrunner.gnm1.ann1.S6V2XE Arachis hypogaea HOM05D006147 ORTHO05D007501 6.9e-149 530.8 303 85.8
Oeu055635.1 Olea europaea HOM05D006147 ORTHO05D007501 6.9e-149 530.8 303 84.8
Peaxi162Scf00684g00123 Petunia axillaris HOM05D006147 ORTHO05D007501 1.2e-148 530.0 303 84.2
vmacro17420 Vaccinium macrocarpon HOM05D006147 ORTHO05D007501 1.2e-148 530.0 322 82.0
CAN.G1635.6 Capsicum annuum HOM05D006147 ORTHO05D007501 2.0e-148 529.3 303 84.8
Glyma.11G110000 Glycine max HOM05D006147 ORTHO05D007501 2.0e-148 529.3 303 84.8
PGSC0003DMG402031287 Solanum tuberosum HOM05D006147 ORTHO05D007501 2.0e-148 529.3 303 84.5
PGR042G0282 Punica granatum HOM05D006147 ORTHO05D007501 4.5e-148 528.1 301 83.7
Ca_20936_v3 Cicer arietinum L. HOM05D006147 ORTHO05D007501 7.6e-148 527.3 303 84.8
Sopen09g034870 Solanum pennellii HOM05D006147 ORTHO05D007501 1.3e-147 526.6 303 83.8
FAN15G0109 Fragaria x ananassa HOM05D006147 ORTHO05D007501 1.7e-147 526.2 309 84.5
Solyc09g091970.4 Solanum lycopersicum HOM05D006147 ORTHO05D007501 3.8e-147 525.0 303 83.8
GSVIVG01024169001 Vitis vinifera HOM05D006147 ORTHO05D007501 4.9e-147 524.6 301 84.4
ECA233G5423 Erigeron canadensis HOM05D006147 ORTHO05D001140 6.5e-147 524.2 302 84.8
AT2G21280 Arabidopsis thaliana HOM05D006147 ORTHO05D007501 2.7e-145 518.8 303 83.8
SalBow3G3875 Salvia bowleyana HOM05D006147 ORTHO05D007501 4.6e-145 518.1 303 83.2
AL4G10420 Arabidopsis lyrata HOM05D006147 ORTHO05D007501 1.0e-144 516.9 303 82.8
A04p16060 Brassica napus HOM05D006147 ORTHO05D007501 1.0e-144 516.9 303 82.5
Migut.N01278 Erythranthe guttata HOM05D006147 ORTHO05D007501 1.0e-144 516.9 303 81.8
C04p50520 Brassica napus HOM05D006147 ORTHO05D007501 1.8e-144 516.2 303 82.8
Carub.0004s0032 Capsella rubella HOM05D006147 ORTHO05D007501 5.1e-144 514.6 303 82.8
THA.LOC104804110 Tarenaya hassleriana HOM05D006147 ORTHO05D007501 8.7e-144 513.8 302 82.5
EL10Ac9g21633 Beta vulgaris HOM05D006147 ORTHO05D007501 2.5e-143 512.3 302 82.5
Thhalv10000221m.g Eutrema salsugineum HOM05D006147 ORTHO05D007501 3.3e-143 511.9 303 82.2
Aa31LG7G15210 Aethionema arabicum HOM05D006147 ORTHO05D007501 5.7e-143 511.1 303 80.9
BcaC02g08802 Brassica carinata HOM05D006147 ORTHO05D007501 5.7e-143 511.1 303 81.8
BolC4t26650H Brassica oleracea HOM05D006147 ORTHO05D007501 5.7e-143 511.1 303 81.8
CARHR112150 Cardamine hirsuta HOM05D006147 ORTHO05D007501 1.1e-141 506.9 303 81.2
AUR62016834 Chenopodium quinoa HOM05D006147 ORTHO05D007501 1.4e-141 506.5 302 80.8
Sp4g00470 Schrenkiella parvula HOM05D006147 ORTHO05D007501 3.1e-141 505.4 303 80.5
Hund00185 Selenicereus undatus HOM05D006147 ORTHO05D007501 2.2e-139 499.2 302 79.1
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 2.9e-139 498.8 303 81.2
Hund00177 Selenicereus undatus HOM05D006147 ORTHO05D007501 6.5e-139 497.7 302 78.8
Rhsim05G0068100 Rhododendron simsii HOM05D006147 ORTHO05D007501 1.4e-138 496.5 302 82.1
Gorai.005G248600 Gossypium raimondii HOM05D006147 ORTHO05D007501 7.2e-138 494.2 270 89.3
ATR0149G025 Amborella trichopoda HOM05D006147 ORTHO05D007501 1.3e-136 490.0 302 79.5
AUR62010384 Chenopodium quinoa HOM05D006147 ORTHO05D007501 1.3e-136 490.0 336 73.2
HPP92_002502 Vanilla planifolia HOM05D006147 ORTHO05D007501 7.4e-135 484.2 301 76.4
Sc18g0005390 Simmondsia chinensis HOM05D006147 ORTHO05D007501 3.8e-131 471.9 270 85.2
Os02g0834700 Oryza sativa ssp. japonica HOM05D006147 ORTHO05D007501 8.5e-131 470.7 301 75.1
DCAR_003686 Daucus carota HOM05D006147 ORTHO05D007501 3.2e-130 468.8 281 80.4
ClCG02G004540 Citrullus lanatus HOM05D006147 ORTHO05D007501 1.0e-128 463.8 303 76.9
MELO3C002785.2 Cucumis melo HOM05D006147 ORTHO05D007501 1.5e-127 459.9 252 88.5
CDE02G0092 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 2.8e-126 455.7 302 74.5
Lsat_1_v5_gn_8_127980 Lactuca sativa HOM05D006147 ORTHO05D007501 6.9e-125 451.1 306 76.8
SMO146G0042 Selaginella moellendorffii HOM05D006147 ORTHO05D007501 1.1e-119 433.7 302 67.2
Nitab4.5_0001154g0060 Nicotiana tabacum HOM05D006147 ORTHO05D007501 2.0e-119 433.0 253 82.2
Pp3c7_11090 Physcomitrium patens HOM05D006147 ORTHO05D007501 2.6e-119 432.6 302 66.9
Pp3c7_11100 Physcomitrium patens HOM05D006147 ORTHO05D007501 2.6e-119 432.6 302 66.9
Mapoly0021s0030 Marchantia polymorpha HOM05D006147 ORTHO05D007501 9.7e-119 430.6 303 67.7
Zm00001eb259680 Zea mays HOM05D006147 ORTHO05D007501 7.7e-116 421.0 272 74.3
PSO170G3006 Papaver somniferum HOM05D006147 ORTHO05D007501 3.8e-115 418.7 301 71.1
unitig_899.g15602 Utricularia gibba HOM05D006147 ORTHO05D007501 1.6e-105 386.7 280 67.5
Cc02_g16890 Coffea canephora HOM05D006147 ORTHO05D007501 1.0e-104 384.0 223 83.9
Dinv41999 Davidia involucrata HOM05D006147 ORTHO05D007501 6.1e-97 358.2 200 88.0
Cre05.g233305 Chlamydomonas reinhardtii HOM05D006147 ORTHO05D007501 3.7e-94 349.0 302 55.3
FvH4_2g10480 Fragaria vesca HOM05D006147 ORTHO05D007501 4.7e-89 332.0 246 70.3
Nitab4.5_0001370g0020 Nicotiana tabacum HOM05D006147 ORTHO05D007501 2.6e-87 326.2 184 85.3
MCO05G212 Micromonas commoda HOM05D006147 ORTHO05D007501 7.5e-87 324.7 306 51.3
SGA_v2.0_scaffold80G25875 Striga asiatica HOM05D006147 ORTHO05D007501 1.1e-85 320.9 259 62.5
Nn6g32256 Nelumbo nucifera HOM05D006147 ORTHO05D007501 4.3e-82 308.9 189 80.4
AUR62040654 Chenopodium quinoa HOM05D006147 ORTHO05D007501 1.2e-81 307.4 304 56.6
MCO16G248 Micromonas commoda HOM05D006147 ORTHO05D007501 1.2e-81 307.4 310 50.6
PRCOL_00000238 Prasinoderma coloniale HOM05D006147 ORTHO05D007501 9.2e-77 291.2 241 59.8
arahy.Tifrunner.gnm1.ann1.B04QBU Arachis hypogaea HOM05D006147 ORTHO05D007501 8.1e-73 278.1 205 69.8
MELO3C028749.2 Cucumis melo HOM05D006147 ORTHO05D007501 7.5e-71 271.6 199 72.4
Nn4g26316 Nelumbo nucifera HOM05D006147 ORTHO05D007501 7.1e-61 238.4 124 89.5
Nn6g32490 Nelumbo nucifera HOM05D006147 ORTHO05D007501 7.1e-61 238.4 124 89.5
arahy.Tifrunner.gnm1.ann1.KZ1FWN Arachis hypogaea HOM05D006147 ORTHO05D007501 2.4e-53 213.4 182 64.8
C09p25880 Brassica napus HOM05D006147 ORTHO05D007501 3.2e-53 213.0 122 77.9
BolC9t55495H Brassica oleracea HOM05D006147 ORTHO05D007501 9.3e-53 211.5 122 77.0
arahy.Tifrunner.gnm1.ann1.63XKYH Arachis hypogaea HOM05D006147 ORTHO05D007501 1.7e-51 207.2 137 76.6
SEGI_33639 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 8.1e-41 171.8 103 74.8
CDE04G1860 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 3.2e-37 159.8 297 36.4
Pp3s34_200 Physcomitrium patens HOM05D006147 ORTHO05D007501 5.5e-37 159.1 304 31.9
Cc02_g16880 Coffea canephora HOM05D006147 ORTHO05D007501 4.3e-34 149.4 80 88.8
BcaB08g34979 Brassica carinata HOM05D006147 ORTHO05D007501 3.7e-33 146.4 144 56.9
BolC2t08257H Brassica oleracea HOM05D006147 ORTHO05D007501 3.7e-33 146.4 125 61.6
BraA07t28491Z Brassica rapa HOM05D006147 ORTHO05D007501 3.1e-32 143.3 102 69.6
arahy.Tifrunner.gnm1.ann1.PBTS15 Arachis hypogaea HOM05D006147 ORTHO05D007501 1.7e-30 137.5 181 45.9
BcaC03g14677 Brassica carinata HOM05D006147 ORTHO05D007501 1.2e-28 131.3 117 60.7
arahy.Tifrunner.gnm1.ann1.UB8UIZ Arachis hypogaea HOM05D006147 ORTHO05D007501 3.3e-26 123.2 181 45.3
A07p07030 Brassica napus HOM05D006147 ORTHO05D007501 9.7e-26 121.7 102 62.7
C02p21170 Brassica napus HOM05D006147 ORTHO05D007501 1.7e-22 110.9 145 48.3
arahy.Tifrunner.gnm1.ann1.U5A9T5 Arachis hypogaea HOM05D000321 ORTHO05D000204 2.2e-22 110.5 181 42.0
C02p21180 Brassica napus HOM05D006147 ORTHO05D007501 2.9e-22 110.2 71 67.6
Duzib132G0670 Durio zibethinus HOM05D006147 ORTHO05D007501 1.9e-18 97.4 83 60.2
SEGI_01868 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 7.2e-13 79.0 64 62.5
MBI05_g17912_MAGBIO Magnolia biondii HOM05D006147 ORTHO05D007501 3.0e-11 73.6 45 75.6
MELO3C013418.2 Cucumis melo HOM05D006147 ORTHO05D007501 6.3e-09 65.9 59 62.7


User provided reference genes

Program Settings