Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G045000 Carya illinoinensis HOM05D004546 ORTHO05D005419 1.2e-210 736.5 448 100.0
Cfa005513 Carpinus fangiana HOM05D004546 ORTHO05D005419 2.1e-186 656.0 438 82.0
Haze_01703 Corylus avellana HOM05D004546 ORTHO05D005419 2.9e-172 609.0 543 67.6
QL02p098920 Quercus lobata HOM05D004546 ORTHO05D005419 3.9e-156 555.4 351 84.6
Prupe.1G570900 Prunus persica HOM05D004546 ORTHO05D005419 6.8e-145 518.1 376 71.8
GSVIVG01035964001 Vitis vinifera HOM05D004546 ORTHO05D005419 2.2e-143 513.1 447 64.4
CSS0049092 Camellia sinensis var. sinensis HOM05D004546 ORTHO05D005419 1.6e-141 506.9 375 69.6
Potri.007G116200 Populus trichocarpa HOM05D004546 ORTHO05D005419 4.6e-141 505.4 376 70.5
Hma1.2p1_1482F.1_g286200 Hydrangea macrophylla HOM05D004546 ORTHO05D005419 1.0e-140 504.2 447 61.5
Thecc.05G227600 Theobroma cacao HOM05D004546 ORTHO05D005419 3.0e-140 502.7 440 60.7
Duzib177G0829 Durio zibethinus HOM05D004546 ORTHO05D005419 3.3e-139 499.2 376 68.6
Sed0013794 Sechium edule HOM05D004546 ORTHO05D005419 2.4e-137 493.0 375 68.5
Rhsim09G0016100 Rhododendron simsii HOM05D004546 ORTHO05D005419 3.1e-137 492.7 377 69.2
CsaV3_5G025650 Cucumis sativus L. HOM05D004546 ORTHO05D005419 5.3e-137 491.9 375 67.7
Sabra17G0029200 Salix brachista HOM05D004546 ORTHO05D005419 9.0e-137 491.1 376 69.7
Potri.017G043000 Populus trichocarpa HOM05D004546 ORTHO05D005419 1.3e-135 487.3 376 68.6
Rhsim11G0128800 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.7e-135 486.9 389 66.6
Lalb_Chr12g0204461 Lupinus albus HOM05D004546 ORTHO05D005419 8.4e-135 484.6 377 68.4
vmacro01757 Vaccinium macrocarpon HOM05D004546 ORTHO05D005419 2.4e-134 483.0 376 68.1
Ciclev10015244m.g Citrus clementina HOM05D004546 ORTHO05D005419 1.3e-132 477.2 373 67.8
TAR628G0514 Trochodendron aralioides HOM05D004546 ORTHO05D005419 6.6e-132 474.9 375 68.3
ClCG03G000010 Citrullus lanatus HOM05D004546 ORTHO05D005419 1.3e-130 470.7 411 61.8
DCAR_006706 Daucus carota HOM05D004546 ORTHO05D005419 1.6e-130 470.3 376 65.2
PGSC0003DMG400010002 Solanum tuberosum HOM05D004546 ORTHO05D005419 2.8e-130 469.5 376 64.6
Eucgr.G00575 Eucalyptus grandis HOM05D004546 ORTHO05D005419 2.9e-127 459.5 370 65.1
Atru.chr8.1488 Acer truncatum HOM05D004546 ORTHO05D005419 4.2e-126 455.7 376 64.6
SHI16664 Sapria himalayana HOM05D004546 ORTHO05D005419 5.4e-126 455.3 378 63.5
MD08G1233000 Malus domestica HOM05D004546 ORTHO05D005419 7.9e-125 451.4 376 63.3
Glyma.05G169000 Glycine max HOM05D004546 ORTHO05D005419 1.0e-124 451.1 375 65.1
CANSAT54G1257 Cannabis sativa HOM05D004546 ORTHO05D005419 3.0e-124 449.5 369 63.7
Manes.10G066500 Manihot esculenta HOM05D004546 ORTHO05D005419 4.3e-123 445.7 376 65.4
Gorai.001G269700 Gossypium raimondii HOM05D004546 ORTHO05D005419 5.6e-123 445.3 376 64.6
THA.LOC104809617 Tarenaya hassleriana HOM05D004546 ORTHO05D005419 4.8e-122 442.2 376 60.9
MD15G1425300 Malus domestica HOM05D004546 ORTHO05D005419 3.1e-121 439.5 376 62.0
Phvul.002G249700 Phaseolus vulgaris HOM05D004546 ORTHO05D005419 2.0e-120 436.8 375 61.9
Migut.B00830 Erythranthe guttata HOM05D004546 ORTHO05D005419 4.9e-119 432.2 376 60.1
Rhsim09G0048700 Rhododendron simsii HOM05D004546 ORTHO05D005419 6.4e-119 431.8 321 70.4
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 1.2e-117 427.6 376 57.7
Peaxi162Scf00152g01427 Petunia axillaris HOM05D004546 ORTHO05D005419 1.2e-117 427.6 372 61.6
MSTRG.16518 Avicennia marina HOM05D004546 ORTHO05D005419 2.3e-116 423.3 376 60.9
Sopen10g008970 Solanum pennellii HOM05D004546 ORTHO05D005419 5.1e-116 422.2 362 61.3
RcHm_v2.0_Chr7g0222021 Rosa chinensis HOM05D004546 ORTHO05D005419 1.5e-115 420.6 376 59.8
Nitab4.5_0003652g0050 Nicotiana tabacum HOM05D004546 ORTHO05D005419 2.1e-114 416.8 376 58.2
VMungo0251G0798 Vigna mungo HOM05D004546 ORTHO05D005419 3.7e-114 416.0 403 57.3
CARHR052070 Cardamine hirsuta HOM05D004546 ORTHO05D005419 6.2e-114 415.2 376 56.9
Sabra07G0094500 Salix brachista HOM05D004546 ORTHO05D005419 6.2e-114 415.2 543 47.9
Dinv24291 Davidia involucrata HOM05D004546 ORTHO05D005419 1.4e-113 414.1 447 53.5
Nitab4.5_0000753g0130 Nicotiana tabacum HOM05D004546 ORTHO05D005419 3.1e-113 412.9 376 58.0
ECA234G1828 Erigeron canadensis HOM05D004546 ORTHO05D005419 1.2e-112 411.0 374 56.7
Solyc10g019040.2 Solanum lycopersicum HOM05D004546 ORTHO05D005419 2.0e-112 410.2 350 61.1
GSVIVG01022895001 Vitis vinifera HOM05D004546 ORTHO05D005419 3.4e-112 409.5 447 56.8
Sp2g03510 Schrenkiella parvula HOM05D004546 ORTHO05D005419 1.6e-109 400.6 376 56.6
Gohir.D06G191600 Gossypium hirsutum HOM05D004546 ORTHO05D005419 2.1e-109 400.2 376 58.5
FAN02G2941 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.7e-109 399.8 376 58.8
Lj4g0018170 Lotus japonicus HOM05D004546 ORTHO05D005419 6.0e-109 398.7 378 59.3
Carub.0002s0420 Capsella rubella HOM05D004546 ORTHO05D005419 7.9e-109 398.3 376 55.3
Sc11g0004500 Simmondsia chinensis HOM05D004546 ORTHO05D005419 7.9e-109 398.3 376 54.3
Actinidia00204 Actinidia chinensis HOM05D004546 ORTHO05D005419 2.3e-108 396.7 443 51.9
FvH4_6g25020 Fragaria vesca HOM05D004546 ORTHO05D005419 6.7e-108 395.2 376 58.0
Cpa.g.sc8.264 Carica papaya HOM05D004546 ORTHO05D005419 5.7e-107 392.1 303 67.3
BolC4t24246H Brassica oleracea HOM05D004546 ORTHO05D005419 9.7e-107 391.3 384 54.2
CAN.G1330.18 Capsicum annuum HOM05D004546 ORTHO05D005419 9.7e-107 391.3 376 56.4
AT1G61000 Arabidopsis thaliana HOM05D004546 ORTHO05D005419 1.3e-106 391.0 376 54.3
TPR.G23101 Trifolium pratense HOM05D004546 ORTHO05D005419 2.2e-106 390.2 382 57.6
TWI59G0103 Tripterygium wilfordii HOM05D004546 ORTHO05D005419 2.8e-106 389.8 312 65.4
FAN05G4088 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.2e-104 384.4 398 55.0
Lj5A252T47 Lonicera japonica HOM05D004546 ORTHO05D005419 1.2e-104 384.4 376 58.0
Gohir.A06G184800 Gossypium hirsutum HOM05D004546 ORTHO05D005419 2.0e-104 383.6 376 56.1
PSO210G6794 Papaver somniferum HOM05D004546 ORTHO05D005419 2.0e-104 383.6 375 54.9
Aqoxy6G00209 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 5.0e-103 379.0 375 54.7
Cc02_g22580 Coffea canephora HOM05D004546 ORTHO05D005419 6.5e-103 378.6 375 55.2
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 6.5e-103 378.6 384 56.2
PSO210G7371 Papaver somniferum HOM05D004546 ORTHO05D005419 8.5e-103 378.3 375 54.4
FAN14G0315 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.5e-102 376.7 403 54.1
C03p25600 Brassica napus HOM05D004546 ORTHO05D005419 5.5e-102 375.6 382 53.7
PGR042G1236 Punica granatum HOM05D004546 ORTHO05D005419 7.2e-102 375.2 443 55.8
Medtr8g088840 Medicago truncatula HOM05D004546 ORTHO05D005419 9.4e-102 374.8 379 56.2
Ca_17808_v3 Cicer arietinum L. HOM05D004546 ORTHO05D005419 2.7e-101 373.2 377 56.0
Thhalv10023463m.g Eutrema salsugineum HOM05D004546 ORTHO05D005419 3.6e-101 372.9 376 51.6
C04p25630 Brassica napus HOM05D004546 ORTHO05D005419 5.1e-100 369.0 433 48.3
BolC3t14948H Brassica oleracea HOM05D004546 ORTHO05D005419 6.7e-100 368.6 391 52.2
EL10Ac2g02703 Beta vulgaris HOM05D004546 ORTHO05D005419 3.3e-99 366.3 374 54.0
A03p21620 Brassica napus HOM05D004546 ORTHO05D005419 3.3e-99 366.3 391 51.4
BraA03t11397Z Brassica rapa HOM05D004546 ORTHO05D005419 3.3e-99 366.3 391 51.4
Lsat_1_v5_gn_5_105520 Lactuca sativa HOM05D004546 ORTHO05D005419 7.4e-99 365.2 374 52.1
Atru.chr13.2649 Acer truncatum HOM05D004546 ORTHO05D005419 9.1e-97 358.2 289 67.1
HanXRQChr10g0290511 Helianthus annuus HOM05D004546 ORTHO05D005419 9.1e-97 358.2 376 54.3
Gorai.010G224800 Gossypium raimondii HOM05D004546 ORTHO05D005419 1.2e-96 357.8 376 53.2
RcHm_v2.0_Chr1g0336301 Rosa chinensis HOM05D004546 ORTHO05D005419 2.0e-96 357.1 353 55.5
Medtr4g049650 Medicago truncatula HOM05D004546 ORTHO05D005419 4.5e-96 355.9 384 52.1
Psat7g062000 Pisum sativum HOM05D004546 ORTHO05D005419 7.7e-96 355.1 374 52.7
Peaxi162Scf00152g01529 Petunia axillaris HOM05D004546 ORTHO05D005419 2.5e-94 350.1 379 53.6
arahy.Tifrunner.gnm1.ann1.QA5S84 Arachis hypogaea HOM05D004546 ORTHO05D005419 3.2e-94 349.7 376 53.5
arahy.Tifrunner.gnm1.ann1.SB4BQ5 Arachis hypogaea HOM05D004546 ORTHO05D005419 3.2e-94 349.7 376 52.9
SGA_v2.0_scaffold110G31325 Striga asiatica HOM05D004546 ORTHO05D005419 4.2e-94 349.4 381 52.2
Gohir.A07G227000 Gossypium hirsutum HOM05D004546 ORTHO05D005419 5.5e-94 349.0 376 52.1
Gohir.D07G234200 Gossypium hirsutum HOM05D004546 ORTHO05D005419 1.8e-92 344.0 376 52.1
BcaC02g10598 Brassica carinata HOM05D004546 ORTHO05D005419 6.7e-92 342.0 400 48.2
FvH4_7g06682 Fragaria vesca HOM05D004546 ORTHO05D005419 2.2e-90 337.0 376 51.1
FAN06G4932 Fragaria x ananassa HOM05D004546 ORTHO05D005419 6.3e-90 335.5 376 51.1
Ah.14g086060 Amaranthus hybridus HOM05D004546 ORTHO05D005419 1.5e-88 330.9 374 50.0
Oeu033122.2 Olea europaea HOM05D004546 ORTHO05D005419 5.9e-88 328.9 248 66.5
AUR62041118 Chenopodium quinoa HOM05D004546 ORTHO05D005419 1.0e-87 328.2 375 50.1
AUR62014224 Chenopodium quinoa HOM05D004546 ORTHO05D005419 2.7e-85 320.1 375 49.3
COL.COLO4_10577 Corchorus olitorius HOM05D004546 ORTHO05D005419 3.6e-85 319.7 299 58.9
Carub.0002s0419 Capsella rubella HOM05D004546 ORTHO05D005419 6.1e-85 318.9 395 48.1
TPR.G28353 Trifolium pratense HOM05D004546 ORTHO05D005419 8.5e-79 298.5 287 55.4
Medtr8g088800 Medicago truncatula HOM05D004546 ORTHO05D005419 1.1e-78 298.1 311 55.0
Hund15499 Selenicereus undatus HOM05D004546 ORTHO05D005419 7.2e-78 295.4 325 49.8
CDE08G0494 Ceratophyllum demersum HOM05D004546 ORTHO05D005419 1.4e-73 281.2 338 47.9
VMungo0251G0767 Vigna mungo HOM05D004546 ORTHO05D005419 2.9e-71 273.5 431 41.3
Eucgr.L03482 Eucalyptus grandis HOM05D004546 ORTHO05D005419 1.1e-70 271.6 221 62.0
Nn1g08777 Nelumbo nucifera HOM05D004546 ORTHO05D005419 5.7e-67 259.2 287 55.1
COL.COLO4_13071 Corchorus olitorius HOM05D004546 ORTHO05D005419 8.3e-66 255.4 206 61.2
HPP92_000323 Vanilla planifolia HOM05D004546 ORTHO05D005419 1.6e-64 251.1 373 39.7
Os03g0577100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 7.7e-64 248.8 378 41.0
Rhsim09G0048900 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.5e-62 244.6 413 40.2
Lsat_1_v5_gn_8_80961 Lactuca sativa HOM05D004546 ORTHO05D005419 1.9e-62 244.2 257 50.6
TPR.G38758 Trifolium pratense HOM05D004546 ORTHO05D005419 5.5e-62 242.7 265 49.8
FAN03G2280 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.8e-61 240.4 549 33.3
Os08g0163100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 2.6e-59 233.8 378 39.2
AL2G15450 Arabidopsis lyrata HOM05D004546 ORTHO05D005419 5.9e-56 222.6 245 52.2
unitig_8.g2954 Utricularia gibba HOM05D004546 ORTHO05D005419 5.0e-55 219.5 377 39.0
TPR.G31804 Trifolium pratense HOM05D004546 ORTHO05D005419 4.9e-50 203.0 217 56.7
C05p50930 Brassica napus HOM05D004546 ORTHO05D005419 4.1e-49 199.9 206 47.6
MELO3C002916.2 Cucumis melo HOM05D004546 ORTHO05D005419 4.6e-48 196.4 158 70.9
ATR0177G064 Amborella trichopoda HOM05D004546 ORTHO05D005419 9.5e-46 188.7 340 35.6
Atru.chr4.610 Acer truncatum HOM05D004546 ORTHO05D005419 1.6e-40 171.4 204 45.6
SEGI_32079 Sequoiadendron giganteum HOM05D004546 ORTHO05D005419 3.5e-40 170.2 361 34.6
Zm00001eb064460 Zea mays HOM05D004546 ORTHO05D005419 4.6e-40 169.9 377 32.9
TPR.G37878 Trifolium pratense HOM05D004546 ORTHO05D005419 4.3e-38 163.3 160 56.9
FAN10G1533 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.9e-34 150.6 376 33.0
Oeu027800.1 Olea europaea HOM05D004546 ORTHO05D005419 5.4e-33 146.4 116 67.2
MD08G1232500 Malus domestica HOM05D004546 ORTHO05D005419 3.3e-30 137.1 99 63.6
TPR.G37996 Trifolium pratense HOM05D004546 ORTHO05D005419 2.4e-28 131.0 204 42.6
AagrBONN_evm.TU.Sc2ySwM_117.2656 Anthoceros agrestis HOM05D004546 ORTHO05D005419 4.0e-28 130.2 250 32.4
Aqoxy7G01614 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 8.9e-28 129.0 324 32.7
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 3.5e-24 117.1 123 49.6
CAN.G1882.3 Capsicum annuum HOM05D004546 ORTHO05D005419 7.8e-24 115.9 82 73.2
RhsimUnG0234900 Rhododendron simsii HOM05D004546 ORTHO05D005419 6.6e-23 112.8 99 54.5
Rhsim09G0048500 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.3e-21 108.6 97 54.6
TPR.G7268 Trifolium pratense HOM05D004546 ORTHO05D005419 6.9e-20 102.8 74 74.3
CAN.G1882.2 Capsicum annuum HOM05D004546 ORTHO05D005419 2.0e-19 101.3 88 64.8
PSO210G1504 Papaver somniferum HOM05D004546 ORTHO05D005419 7.9e-16 89.4 88 55.7
C05p50920 Brassica napus HOM05D004546 ORTHO05D005419 1.1e-14 85.5 100 52.0
Mapoly0004s0096 Marchantia polymorpha HOM05D004546 ORTHO05D005419 8.1e-13 79.3 206 27.7
Hund15500 Selenicereus undatus HOM05D004546 ORTHO05D005419 2.4e-12 77.8 75 64.0
TPR.G18400 Trifolium pratense HOM05D004546 ORTHO05D005419 3.1e-12 77.4 66 60.6
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.4e-09 67.8 43 79.1
Pp3c12_6220 Physcomitrium patens HOM05D004546 ORTHO05D005419 7.1e-09 66.2 369 22.0
MBI17_g42496_MAGBIO Magnolia biondii HOM05D004546 ORTHO05D005419 2.1e-08 64.7 77 40.3
MCO07G624 Micromonas commoda HOM05D004546 ORTHO05D005419 4.6e-08 63.5 155 27.1
Actinidia39037 Actinidia chinensis HOM05D004546 ORTHO05D005419 3.3e-06 57.4 87 39.1
PRCOL_00002550 Prasinoderma coloniale HOM05D004546 ORTHO05D005419 9.6e-06 55.8 185 24.3


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