Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G040000 Carya illinoinensis HOM05D007736 ORTHO05D009783 1.2e-226 789.6 438 100.0
Cfa021836 Carpinus fangiana HOM05D007736 ORTHO05D009783 2.2e-116 423.3 377 63.1
Haze_10792 Corylus avellana HOM05D007736 ORTHO05D009783 2.2e-116 423.3 379 62.8
ClCG09G014560 Citrullus lanatus HOM05D007736 ORTHO05D009783 7.5e-80 302.0 396 46.5
CsaV3_7G022310 Cucumis sativus L. HOM05D007736 ORTHO05D009783 1.7e-79 300.8 403 45.7
MELO3C028798.2 Cucumis melo HOM05D007736 ORTHO05D009783 4.9e-79 299.3 403 45.4
TWI14G1332 Tripterygium wilfordii HOM05D007736 ORTHO05D009783 2.3e-76 290.4 388 46.6
Sed0025125 Sechium edule HOM05D007736 ORTHO05D009783 1.2e-74 284.6 399 43.9
arahy.Tifrunner.gnm1.ann1.40XV2D Arachis hypogaea HOM05D007736 ORTHO05D009783 6.2e-74 282.3 394 45.9
arahy.Tifrunner.gnm1.ann1.JZ71MD Arachis hypogaea HOM05D007736 ORTHO05D009783 4.0e-73 279.6 386 45.9
QL11p018598 Quercus lobata HOM05D007736 ORTHO05D009783 5.8e-72 275.8 382 47.9
Phvul.006G209200 Phaseolus vulgaris HOM05D007736 ORTHO05D009783 1.9e-70 270.8 404 42.6
Dinv19331 Davidia involucrata HOM05D007736 ORTHO05D009783 4.1e-70 269.6 411 42.1
Cpa.g.sc2.48 Carica papaya HOM05D007736 ORTHO05D009783 2.5e-67 260.4 401 43.4
Potri.015G008200 Populus trichocarpa HOM05D007736 ORTHO05D009783 2.1e-66 257.3 369 43.4
Eucgr.I02697 Eucalyptus grandis HOM05D007736 ORTHO05D009783 1.8e-65 254.2 277 54.2
TAR625G1059 Trochodendron aralioides HOM05D007736 ORTHO05D009783 3.1e-65 253.4 443 39.1
Glyma.15G050700 Glycine max HOM05D007736 ORTHO05D009783 4.0e-65 253.1 395 41.3
Sed0013332 Sechium edule HOM05D007736 ORTHO05D009783 1.2e-64 251.5 402 41.0
VMungo0540G1970 Vigna mungo HOM05D007736 ORTHO05D009783 1.5e-64 251.1 406 41.9
Thecc.02G144400 Theobroma cacao HOM05D007736 ORTHO05D009783 7.6e-64 248.8 380 42.6
Manes.04G057900 Manihot esculenta HOM05D007736 ORTHO05D009783 9.9e-64 248.4 362 43.1
Lj6g0003665 Lotus japonicus HOM05D007736 ORTHO05D009783 3.8e-63 246.5 417 39.1
COL.COLO4_20877 Corchorus olitorius HOM05D007736 ORTHO05D009783 4.9e-63 246.1 388 41.8
Glyma.08G181600 Glycine max HOM05D007736 ORTHO05D009783 1.9e-62 244.2 395 39.7
Sabra12G0012700 Salix brachista HOM05D007736 ORTHO05D009783 3.2e-62 243.4 379 41.4
Dinv24237 Davidia involucrata HOM05D007736 ORTHO05D009783 7.1e-62 242.3 342 44.7
Ca_00110_v3 Cicer arietinum L. HOM05D007736 ORTHO05D009783 9.3e-62 241.9 399 40.4
Sabra15G0006300 Salix brachista HOM05D007736 ORTHO05D009783 6.0e-61 239.2 371 41.5
Potri.012G020400 Populus trichocarpa HOM05D007736 ORTHO05D009783 7.8e-61 238.8 371 42.0
Psat1g218640 Pisum sativum HOM05D007736 ORTHO05D009783 1.9e-59 234.2 386 40.9
Medtr2g008130 Medicago truncatula HOM05D007736 ORTHO05D009783 4.3e-59 233.0 388 40.7
Cc02_g21990 Coffea canephora HOM05D007736 ORTHO05D009783 9.0e-57 225.3 321 41.4
PGR142G3153 Punica granatum HOM05D007736 ORTHO05D009783 9.0e-57 225.3 397 39.5
Actinidia38961 Actinidia chinensis HOM05D007736 ORTHO05D009783 7.6e-56 222.2 397 39.0
Lj5P244T47 Lonicera japonica HOM05D007736 ORTHO05D009783 7.9e-53 212.2 318 43.1
Rhsim11G0133400 Rhododendron simsii HOM05D007736 ORTHO05D009783 2.5e-51 207.2 265 45.7
vmacro01801 Vaccinium macrocarpon HOM05D007736 ORTHO05D009783 3.4e-48 196.8 434 37.6
TPR.G19753 Trifolium pratense HOM05D007736 ORTHO05D009783 1.6e-45 188.0 342 37.4
Lalb_Chr20g0123201 Lupinus albus HOM05D007736 ORTHO05D009783 4.6e-45 186.4 432 33.1
Ciclev10028677m.g Citrus clementina HOM05D007736 ORTHO05D009783 6.0e-45 186.0 370 37.3
Nitab4.5_0000249g0440 Nicotiana tabacum HOM05D007736 ORTHO05D009783 3.9e-44 183.3 277 40.1
Sc16g0009620 Simmondsia chinensis HOM05D007736 ORTHO05D009783 5.1e-44 183.0 411 34.5
DCAR_021830 Daucus carota HOM05D007736 ORTHO05D009783 6.7e-44 182.6 242 42.6
Hund21796 Selenicereus undatus HOM05D007736 ORTHO05D009783 1.5e-43 181.4 249 44.2
PGSC0003DMG400029771 Solanum tuberosum HOM05D007736 ORTHO05D009783 5.6e-43 179.5 243 44.9
Atru.chr6.1122 Acer truncatum HOM05D007736 ORTHO05D009783 1.6e-42 177.9 342 40.1
EL10Ac4g09677 Beta vulgaris HOM05D007736 ORTHO05D009783 2.1e-42 177.6 277 40.8
Nitab4.5_0014357g0010 Nicotiana tabacum HOM05D007736 ORTHO05D009783 1.4e-41 174.9 282 38.7
Solyc01g104790.4 Solanum lycopersicum HOM05D007736 ORTHO05D009783 4.0e-41 173.3 241 43.6
Sopen01g047310 Solanum pennellii HOM05D007736 ORTHO05D009783 1.5e-40 171.4 241 43.6
HanXRQChr16g0514111 Helianthus annuus HOM05D007736 ORTHO05D009783 4.9e-39 166.4 241 44.0
MSTRG.27826 Avicennia marina HOM05D007736 ORTHO05D009783 4.6e-37 159.8 245 40.8
Ah.06g188730 Amaranthus hybridus HOM05D007736 ORTHO05D009783 6.0e-37 159.5 413 31.5
Lsat_1_v5_gn_5_106541 Lactuca sativa HOM05D007736 ORTHO05D009783 6.0e-37 159.5 227 42.7
CAN.G523.104 Capsicum annuum HOM05D007736 ORTHO05D009783 1.0e-36 158.7 263 40.3
AUR62006887 Chenopodium quinoa HOM05D007736 ORTHO05D009783 1.0e-36 158.7 265 40.8
Prupe.6G356600 Prunus persica HOM05D007736 ORTHO05D009783 8.7e-36 155.6 155 51.6
Prupe.7G056800 Prunus persica HOM05D007736 ORTHO05D009783 1.1e-35 155.2 145 52.4
MSTRG.5252 Avicennia marina HOM05D007736 ORTHO05D009783 7.4e-35 152.5 256 37.9
FvH4_6g01062 Fragaria vesca HOM05D000868 ORTHO05D000711 7.4e-35 152.5 141 53.9
FAN05G0537 Fragaria x ananassa HOM05D007736 ORTHO05D009783 9.6e-35 152.1 145 54.5
Actinidia00233 Actinidia chinensis HOM05D007736 ORTHO05D009783 1.3e-34 151.8 242 38.8
MD04G1236600 Malus domestica HOM05D007736 ORTHO05D009783 4.8e-34 149.8 166 48.2
FAN14G5928 Fragaria x ananassa HOM05D007736 ORTHO05D009783 8.2e-34 149.1 141 52.5
FAN05G0165 Fragaria x ananassa HOM05D007736 ORTHO05D009783 1.1e-33 148.7 145 53.8
RcHm_v2.0_Chr3g0448601 Rosa chinensis HOM05D007736 ORTHO05D009783 1.1e-33 148.7 177 45.8
FAN02G1431 Fragaria x ananassa HOM05D007736 ORTHO05D009783 1.5e-32 144.8 180 43.9
Migut.N01016 Erythranthe guttata HOM05D007736 ORTHO05D009783 2.0e-32 144.4 248 36.7
FAN09G0667 Fragaria x ananassa HOM05D007736 ORTHO05D009783 2.6e-32 144.1 180 45.0
MD12G1255900 Malus domestica HOM05D007736 ORTHO05D009783 5.8e-32 142.9 136 51.5
AUR62000538 Chenopodium quinoa HOM05D007736 ORTHO05D009783 7.6e-32 142.5 382 32.7
Nn1g06123 Nelumbo nucifera HOM05D007736 ORTHO05D009783 1.3e-31 141.7 422 28.9
Aqoxy4G00650 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 3.8e-31 140.2 412 31.3
ECA234G2384 Erigeron canadensis HOM05D007736 ORTHO05D009783 5.0e-31 139.8 383 33.4
Aqoxy5G02135 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 2.5e-30 137.5 412 30.8
unitig_26.g9583 Utricularia gibba HOM05D007736 ORTHO05D009783 7.4e-27 125.9 120 49.2
HanXRQChr10g0289121 Helianthus annuus HOM05D007736 ORTHO05D009783 1.3e-23 115.2 226 37.2
SGA_v2.0_scaffold45G17286 Striga asiatica HOM05D007736 ORTHO05D009783 1.9e-22 111.3 242 34.7
ATR0772G143 Amborella trichopoda HOM05D007736 ORTHO05D009783 2.7e-21 107.5 339 28.0
TAR381G1413 Trochodendron aralioides HOM05D007736 ORTHO05D009783 6.1e-21 106.3 83 60.2
CDE02G1981 Ceratophyllum demersum HOM05D007736 ORTHO05D009783 5.7e-19 99.8 239 32.6
Zm00001eb382360 Zea mays HOM05D007736 ORTHO05D009783 3.8e-15 87.0 232 35.8
Os06g0468400 Oryza sativa ssp. japonica HOM05D007736 ORTHO05D009783 3.9e-12 77.0 254 30.7
TAR381G0297 Trochodendron aralioides HOM05D007736 ORTHO05D009783 2.6e-11 74.3 213 33.8
Oeu012723.3 Olea europaea HOM05D007736 ORTHO05D009783 3.7e-10 70.5 146 37.7
HPP92_001092 Vanilla planifolia HOM05D007736 ORTHO05D009783 3.7e-10 70.5 225 31.6


User provided reference genes

Program Settings