Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 3.1e-60 235.3 157 100.0
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 1.4e-52 209.9 157 85.4
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 3.8e-50 201.8 150 75.3
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 1.9e-49 199.5 156 75.0
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 5.5e-49 198.0 153 73.2
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 1.6e-48 196.4 154 73.4
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 4.6e-48 194.9 154 74.0
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 1.0e-47 193.7 147 85.7
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 1.0e-47 193.7 155 72.9
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 1.4e-47 193.4 156 73.1
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.8e-47 193.0 154 73.4
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 2.3e-47 192.6 151 74.2
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 3.0e-47 192.2 153 71.9
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.0e-47 192.2 150 74.0
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 3.0e-47 192.2 154 70.8
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.1e-47 191.4 154 72.7
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.1e-47 191.4 154 72.7
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 5.1e-47 191.4 153 71.9
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 6.7e-47 191.0 153 71.9
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 8.8e-47 190.7 151 72.2
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 8.8e-47 190.7 151 72.2
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 8.8e-47 190.7 149 74.5
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 1.1e-46 190.3 157 70.1
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 1.1e-46 190.3 150 72.7
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 2.0e-46 189.5 155 71.6
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.6e-46 189.1 154 72.7
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 2.6e-46 189.1 153 71.2
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 4.4e-46 188.3 152 71.1
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 5.7e-46 188.0 147 70.1
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 7.4e-46 187.6 146 71.9
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 9.7e-46 187.2 150 72.7
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 1.3e-45 186.8 147 70.1
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 1.7e-45 186.4 153 71.2
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 2.8e-45 185.7 154 83.1
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 2.8e-45 185.7 146 72.6
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 2.8e-45 185.7 149 70.5
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 3.7e-45 185.3 176 65.3
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 3.7e-45 185.3 158 69.6
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 4.8e-45 184.9 154 68.8
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 6.3e-45 184.5 154 70.1
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 1.8e-44 183.0 148 70.9
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 2.4e-44 182.6 149 71.1
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 3.1e-44 182.2 150 67.3
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 3.1e-44 182.2 157 66.9
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 3.1e-44 182.2 157 66.9
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 4.1e-44 181.8 151 84.8
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 6.9e-44 181.0 153 68.6
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 9.1e-44 180.6 150 66.0
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 1.5e-43 179.9 152 68.4
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 2.0e-43 179.5 147 70.1
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 2.0e-43 179.5 153 68.0
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 2.6e-43 179.1 151 71.5
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 4.5e-43 178.3 147 70.7
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 5.9e-43 177.9 155 67.1
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 5.9e-43 177.9 151 66.2
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 1.3e-42 176.8 153 66.0
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 1.3e-42 176.8 149 67.8
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 5.0e-42 174.9 154 66.2
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 6.5e-42 174.5 154 64.3
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 6.5e-42 174.5 155 65.8
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 8.5e-42 174.1 153 66.0
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 1.1e-41 173.7 146 68.5
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 1.4e-41 173.3 156 82.1
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 1.4e-41 173.3 147 67.3
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 1.9e-41 172.9 154 65.6
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 1.9e-41 172.9 154 64.9
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 1.9e-41 172.9 154 65.6
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 1.9e-41 172.9 154 65.6
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 1.9e-41 172.9 154 65.6
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 2.5e-41 172.6 151 65.6
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 2.5e-41 172.6 135 73.3
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 3.2e-41 172.2 154 64.9
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 3.2e-41 172.2 154 64.9
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 3.2e-41 172.2 154 64.9
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 4.2e-41 171.8 154 64.9
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 4.2e-41 171.8 154 64.3
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 7.2e-41 171.0 147 82.3
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 9.4e-41 170.6 148 66.9
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 1.2e-40 170.2 150 66.0
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 1.2e-40 170.2 154 64.3
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 2.1e-40 169.5 153 64.1
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 2.7e-40 169.1 154 63.0
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 3.6e-40 168.7 154 64.9
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 4.7e-40 168.3 146 64.4
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 3.0e-39 165.6 152 78.3
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 5.2e-39 164.9 99 93.9
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 6.7e-39 164.5 154 63.0
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 6.7e-39 164.5 146 65.1
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 1.1e-38 163.7 146 65.1
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 2.6e-38 162.5 99 92.9
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 4.4e-38 161.8 148 61.5
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 3.7e-37 158.7 157 76.4
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 6.3e-37 157.9 145 60.0
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 7.0e-36 154.5 138 63.0
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 9.1e-36 154.1 146 59.6
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 1.6e-35 153.3 156 76.3
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.0e-34 150.6 144 59.0
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 2.2e-34 149.4 153 61.4
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 1.5e-33 146.7 140 57.1
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 4.2e-33 145.2 156 73.7
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 4.2e-33 145.2 156 73.7
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 4.2e-33 145.2 152 57.9
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 9.4e-33 144.1 155 74.8
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 1.6e-32 143.3 148 58.8
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.6e-32 143.3 139 56.8
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 2.7e-32 142.5 98 81.6
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 2.6e-30 136.0 96 79.2
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 3.3e-30 135.6 179 63.1
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 8.2e-29 131.0 215 43.3
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 1.1e-28 130.6 96 72.9
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 4.1e-28 128.6 100 74.0
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 5.9e-27 124.8 152 53.3
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 1.1e-25 120.6 96 67.7
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 9.4e-25 117.5 126 76.2
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.6e-24 116.7 140 50.7
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 8.0e-24 114.4 148 43.9
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 1.0e-23 114.0 93 66.7
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 1.0e-23 114.0 89 67.4
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 2.6e-22 109.4 137 42.3
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 8.6e-18 94.4 138 36.2
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.6e-16 90.1 92 58.7
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 1.1e-12 77.4 81 58.0
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 1.4e-12 77.0 128 59.4
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 9.2e-12 74.3 52 73.1
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 1.7e-10 70.1 44 84.1
Oeu011770.1 Olea europaea HOM05D004115 ORTHO05D005004 3.4e-06 55.8 42 69.0


User provided reference genes

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