Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G026800 Carya illinoinensis HOM05D007867 ORTHO05D009953 1.6e-24 115.5 69 100.0
Actinidia36378 Actinidia chinensis HOM05D007867 ORTHO05D009953 7.8e-16 86.7 64 65.6
FvH4_1g18950 Fragaria vesca HOM05D007867 ORTHO05D009953 1.3e-15 85.9 67 83.6
ATR0800G156 Amborella trichopoda HOM05D007867 ORTHO05D009953 1.7e-15 85.5 64 84.4
Lalb_Chr09g0325761 Lupinus albus HOM05D007867 ORTHO05D009953 1.7e-15 85.5 64 81.2
Thecc.01G083600 Theobroma cacao HOM05D007867 ORTHO05D009953 5.1e-15 84.0 64 82.8
Nn1g05680 Nelumbo nucifera HOM05D007867 ORTHO05D009953 6.6e-15 83.6 64 84.4
vmacro19595 Vaccinium macrocarpon HOM05D007867 ORTHO05D009953 2.5e-14 81.6 64 81.2
Dinv36978 Davidia involucrata HOM05D007867 ORTHO05D009953 3.3e-14 81.3 65 80.0
RcHm_v2.0_Chr2g0109971 Rosa chinensis HOM05D007867 ORTHO05D009953 4.3e-14 80.9 66 81.8
MD10G1057100 Malus domestica HOM05D007867 ORTHO05D009953 5.6e-14 80.5 65 83.1
CiPaw.08G145800 Carya illinoinensis HOM05D007867 ORTHO05D009953 2.1e-13 78.6 64 79.7
Sc03g0000590 Simmondsia chinensis HOM05D007867 ORTHO05D009953 2.1e-13 78.6 69 76.8
Gohir.A11G209001 Gossypium hirsutum HOM05D007867 ORTHO05D009953 8.1e-13 76.6 64 76.6
Zm00001eb061250 Zea mays HOM05D007867 ORTHO05D009953 1.1e-12 76.3 68 79.4
Sed0014306 Sechium edule HOM05D007867 ORTHO05D009953 1.4e-12 75.9 68 75.0
CiPaw.08G145600 Carya illinoinensis HOM05D007867 ORTHO05D009953 1.8e-12 75.5 66 74.2
Cc02_g20570 Coffea canephora HOM05D007867 ORTHO05D009953 6.9e-12 73.6 68 75.0
Gohir.D03G034400 Gossypium hirsutum HOM05D007867 ORTHO05D009953 1.5e-11 72.4 64 79.7
Gorai.003G036100 Gossypium raimondii HOM05D007867 ORTHO05D009953 1.5e-11 72.4 64 79.7
Manes.13G104200 Manihot esculenta HOM05D007867 ORTHO05D009953 2.0e-11 72.0 64 78.1
Nn5g29770 Nelumbo nucifera HOM05D007867 ORTHO05D009953 2.0e-11 72.0 64 78.1
GSVIVG01006775001 Vitis vinifera HOM05D007867 ORTHO05D009953 2.0e-11 72.0 64 78.1
CiPaw.07G042200 Carya illinoinensis HOM05D007867 ORTHO05D009953 4.5e-11 70.9 63 79.4
Gohir.D11G214500 Gossypium hirsutum HOM05D007867 ORTHO05D009953 4.5e-11 70.9 64 78.1
FAN28G0366 Fragaria x ananassa HOM05D007867 ORTHO05D009953 5.8e-11 70.5 44 84.1
Lj2g0008804 Lotus japonicus HOM05D007867 ORTHO05D009953 7.6e-11 70.1 68 72.1
RhsimUnG0066800 Rhododendron simsii HOM05D007867 ORTHO05D009953 9.9e-11 69.7 77 51.9
CiPaw.08G128500 Carya illinoinensis HOM05D007867 ORTHO05D009953 2.2e-10 68.6 66 66.7
Cc07_g07830 Coffea canephora HOM05D007867 ORTHO05D009953 2.2e-10 68.6 68 72.1
DCAR_021457 Daucus carota HOM05D000419 ORTHO05D000692 2.2e-10 68.6 45 77.8
Oeu033792.2 Olea europaea HOM05D007867 ORTHO05D009953 2.9e-10 68.2 44 77.3
Glyma.09G202700 Glycine max HOM05D007867 ORTHO05D009953 6.4e-10 67.0 64 73.4
Hund00401 Selenicereus undatus HOM05D007867 ORTHO05D009953 1.9e-09 65.5 66 71.2
CSS0005733 Camellia sinensis var. sinensis HOM05D007867 ORTHO05D009953 3.2e-09 64.7 41 78.0
Os07g0191650 Oryza sativa ssp. japonica HOM05D007867 ORTHO05D009953 3.2e-09 64.7 74 66.2
Eucgr.I02581 Eucalyptus grandis HOM05D007867 ORTHO05D009953 5.4e-09 63.9 46 71.7
EL10Ac9g22129 Beta vulgaris HOM05D007867 ORTHO05D009953 1.2e-08 62.8 69 65.2
Lalb_Chr16g0383101 Lupinus albus HOM05D007867 ORTHO05D009953 1.6e-08 62.4 44 77.3
Medtr5g030870 Medicago truncatula HOM05D007867 ORTHO05D009953 1.6e-08 62.4 64 73.4
Ca_13472_v3 Cicer arietinum L. HOM05D007867 ORTHO05D009953 2.1e-08 62.0 66 72.7
Hma1.2p1_1119F.1_g259180 Hydrangea macrophylla HOM05D007867 ORTHO05D009953 1.0e-07 59.7 45 71.1
Potri.015G025600 Populus trichocarpa HOM05D007867 ORTHO05D009953 2.3e-07 58.5 63 55.6
Ciclev10027423m.g Citrus clementina HOM05D007867 ORTHO05D009953 3.0e-07 58.2 64 70.3
TPR.G40500 Trifolium pratense HOM05D007867 ORTHO05D009953 3.9e-07 57.8 27 96.3
Haze_03934 Corylus avellana HOM05D007867 ORTHO05D009953 5.1e-07 57.4 64 68.8
Solyc01g106300.3 Solanum lycopersicum HOM05D007867 ORTHO05D009953 5.1e-07 57.4 57 57.9
SHI12190 Sapria himalayana HOM05D007867 ORTHO05D009953 8.7e-07 56.6 42 64.3
TPR.G37059 Trifolium pratense HOM05D007867 ORTHO05D009953 1.1e-06 56.2 47 68.1
Gohir.A05G401300 Gossypium hirsutum HOM05D007867 ORTHO05D009953 1.5e-06 55.8 73 47.9
Zm00001eb302470 Zea mays HOM05D007867 ORTHO05D009953 1.9e-06 55.5 74 63.5
Cpa.g.c33237.1 Carica papaya HOM05D007867 ORTHO05D009953 3.3e-06 54.7 64 67.2
CiPaw.06G161100 Carya illinoinensis HOM05D007867 ORTHO05D009953 3.3e-06 54.7 49 63.3
FAN23G2231 Fragaria x ananassa HOM05D007867 ORTHO05D009953 3.3e-06 54.7 76 47.4
Gorai.007G230100 Gossypium raimondii HOM05D007867 ORTHO05D009953 4.3e-06 54.3 64 67.2
Prupe.8G075700 Prunus persica HOM05D007867 ORTHO05D009953 4.3e-06 54.3 64 64.1


User provided reference genes

Program Settings