Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 5.9e-202 707.2 332 100.0
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 2.9e-185 651.7 332 91.9
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 9.8e-181 636.7 329 89.1
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 2.8e-180 635.2 329 88.8
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 2.8e-180 635.2 330 88.5
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 3.7e-180 634.8 329 89.1
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 3.1e-179 631.7 327 87.5
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 7.0e-179 630.6 330 88.8
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 9.2e-179 630.2 331 88.2
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.2e-178 629.8 327 87.2
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 1.6e-178 629.4 327 88.4
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 7.8e-178 627.1 327 87.5
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 1.3e-177 626.3 327 87.5
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 3.8e-177 624.8 329 87.2
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 5.0e-177 624.4 327 87.8
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.5e-176 622.9 329 86.6
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 1.5e-176 622.9 323 88.2
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 3.3e-176 621.7 329 86.9
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 9.5e-176 620.2 327 85.9
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 2.1e-175 619.0 332 85.2
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 2.1e-175 619.0 329 86.0
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 2.8e-175 618.6 335 85.4
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 2.8e-175 618.6 323 87.6
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 4.7e-175 617.8 329 85.1
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 4.7e-175 617.8 329 85.1
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 6.1e-175 617.5 325 86.8
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 6.1e-175 617.5 327 85.9
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 6.1e-175 617.5 327 85.3
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 8.0e-175 617.1 350 82.6
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 8.0e-175 617.1 324 86.4
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 8.0e-175 617.1 327 86.2
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 1.0e-174 616.7 327 86.5
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 1.8e-174 615.9 329 84.8
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.8e-174 615.9 323 87.0
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 2.3e-174 615.5 327 85.9
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 2.3e-174 615.5 329 84.2
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 3.0e-174 615.1 328 86.9
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 6.8e-174 614.0 323 86.4
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.0e-173 612.5 327 85.6
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 5.7e-173 610.9 329 85.1
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 5.7e-173 610.9 323 86.4
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 7.5e-173 610.5 321 85.4
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 9.8e-173 610.1 327 85.3
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 9.8e-173 610.1 327 85.6
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 1.3e-172 609.8 327 84.7
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 2.2e-172 609.0 323 85.8
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 2.2e-172 609.0 332 82.8
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 4.9e-172 607.8 331 83.7
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 5.4e-171 604.4 332 85.2
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 7.0e-171 604.0 327 84.1
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 2.0e-170 602.4 319 85.3
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 5.9e-170 600.9 316 86.1
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.0e-169 600.1 322 83.9
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 2.3e-169 599.0 315 85.4
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 3.0e-169 598.6 323 84.5
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 8.6e-169 597.0 316 85.8
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 1.5e-168 596.3 323 84.2
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 1.9e-168 595.9 324 83.3
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.9e-168 595.9 346 80.3
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 1.9e-168 595.9 329 83.3
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 2.5e-168 595.5 323 85.1
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 1.6e-167 592.8 327 82.3
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 2.1e-167 592.4 316 85.1
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 2.8e-167 592.0 351 77.5
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 3.6e-167 591.7 322 82.6
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 4.7e-167 591.3 327 82.0
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 4.0e-166 588.2 323 83.9
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 6.8e-166 587.4 312 85.3
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 8.9e-166 587.0 335 80.0
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 4.4e-165 584.7 312 84.6
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 4.4e-165 584.7 312 84.6
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 7.5e-165 583.9 322 82.6
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 7.5e-165 583.9 322 82.6
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 1.1e-163 580.1 321 83.8
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 1.4e-163 579.7 325 81.5
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 1.4e-163 579.7 324 80.9
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 1.2e-162 576.6 333 81.1
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 1.7e-161 572.8 314 82.5
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 6.6e-161 570.9 332 78.6
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.5e-160 569.7 333 82.3
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 1.9e-160 569.3 341 77.4
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 3.6e-159 565.1 329 76.6
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 2.0e-157 559.3 344 74.4
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 7.5e-157 557.4 363 74.1
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.3e-156 556.6 297 83.5
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 2.2e-156 555.8 335 78.2
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 7.3e-152 540.8 293 81.9
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 9.5e-152 540.4 327 76.5
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 6.2e-151 537.7 327 77.1
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 2.1e-143 512.7 328 68.6
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 8.1e-143 510.8 321 74.5
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 1.8e-142 509.6 284 79.9
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 4.4e-141 505.0 310 72.9
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 5.8e-141 504.6 317 70.7
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 9.9e-141 503.8 312 71.2
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 1.7e-140 503.1 578 50.2
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 3.3e-128 462.2 313 66.8
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 2.4e-118 429.5 248 79.0
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 2.6e-109 399.4 270 71.9
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 1.8e-105 386.7 200 86.0
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 1.7e-100 370.2 226 79.2
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 3.2e-99 365.9 282 63.5
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 7.7e-93 344.7 350 46.9
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 2.0e-85 320.1 356 44.7
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.0e-81 307.8 317 45.7
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 8.8e-81 304.7 311 46.6
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 6.3e-71 271.9 165 76.4
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 3.5e-61 239.6 167 69.5
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 4.0e-57 226.1 186 57.5
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 8.9e-57 224.9 126 78.6
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 4.9e-55 219.2 335 39.7
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 1.8e-49 200.7 137 71.5
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 3.1e-49 199.9 204 52.9
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 1.9e-46 190.7 196 46.9
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 1.2e-32 144.8 84 75.0
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 1.7e-20 104.4 58 82.8
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 5.3e-17 92.8 79 53.2
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 3.0e-12 77.0 62 59.7
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 3.0e-12 77.0 39 79.5
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.1e-09 68.6 34 79.4
Ciclev10016000m.g Citrus clementina HOM05D000363 ORTHO05D000236 2.9e-07 60.5 155 26.5
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 4.9e-07 59.7 35 65.7
RcHm_v2.0_Chr5g0007821 Rosa chinensis HOM05D000363 ORTHO05D000236 3.2e-06 57.0 122 33.6
HPP92_001752 Vanilla planifolia HOM05D000363 ORTHO05D000236 3.2e-06 57.0 131 31.3


User provided reference genes

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