Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 5.3e-69 264.2 133 100.0
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 1.2e-60 236.5 133 86.5
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 1.2e-60 236.5 133 86.5
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 2.6e-60 235.3 132 88.6
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 5.9e-60 234.2 131 86.3
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 1.7e-59 232.6 133 84.2
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 3.8e-59 231.5 133 86.5
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 5.0e-59 231.1 132 86.4
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 8.5e-59 230.3 133 85.0
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 1.1e-58 229.9 133 84.2
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 1.1e-58 229.9 133 84.2
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 1.1e-58 229.9 133 84.2
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 1.1e-58 229.9 133 84.2
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 2.5e-58 228.8 133 84.2
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 5.5e-58 227.6 132 84.1
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 5.5e-58 227.6 132 84.8
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 5.5e-58 227.6 133 85.7
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 7.2e-58 227.3 133 82.7
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 9.4e-58 226.9 133 82.0
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 1.2e-57 226.5 133 82.7
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 2.7e-57 225.3 133 82.0
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 2.7e-57 225.3 133 82.7
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 3.6e-57 224.9 133 83.5
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 4.6e-57 224.6 140 82.1
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 4.6e-57 224.6 133 80.5
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 7.9e-57 223.8 133 81.2
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 1.8e-56 222.6 133 78.9
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 1.8e-56 222.6 133 81.2
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 3.0e-56 221.9 133 81.2
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 3.0e-56 221.9 133 78.2
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 3.9e-56 221.5 133 80.5
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 6.7e-56 220.7 133 81.2
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 8.8e-56 220.3 133 81.2
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 8.8e-56 220.3 133 81.2
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 4.3e-55 218.0 133 78.9
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 2.2e-54 215.7 134 80.6
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 2.2e-54 215.7 133 77.4
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 3.7e-54 214.9 133 80.5
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 3.7e-54 214.9 133 76.7
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 4.8e-54 214.5 133 80.5
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 6.3e-54 214.2 133 78.9
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 1.1e-53 213.4 126 78.6
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 1.4e-53 213.0 133 75.9
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 2.4e-53 212.2 133 74.4
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 5.3e-53 211.1 133 77.4
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 9.1e-53 210.3 133 76.7
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 3.4e-52 208.4 139 78.4
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 5.9e-52 207.6 133 74.4
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 2.9e-51 205.3 130 74.6
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 6.5e-51 204.1 113 86.7
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 1.1e-50 203.4 133 74.4
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 5.5e-50 201.1 181 60.8
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 3.6e-49 198.4 133 69.9
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 3.6e-49 198.4 116 83.6
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 3.6e-49 198.4 133 69.2
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 6.1e-49 197.6 133 69.2
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 6.1e-49 197.6 133 69.2
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 7.9e-49 197.2 133 72.2
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 7.9e-49 197.2 176 59.1
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 1.8e-48 196.1 133 68.4
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 2.3e-48 195.7 133 71.4
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 3.0e-48 195.3 196 55.1
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 1.1e-47 193.4 133 67.7
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 2.0e-47 192.6 115 80.0
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 2.0e-47 192.6 192 58.3
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 3.3e-47 191.8 133 67.7
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 4.4e-47 191.4 133 67.7
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 5.7e-47 191.0 133 66.9
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 5.7e-47 191.0 133 69.9
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 8.2e-46 187.2 118 73.7
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 7.7e-44 180.6 139 64.7
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 6.5e-43 177.6 105 78.1
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 8.5e-43 177.2 128 68.0
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 1.9e-42 176.0 118 72.9
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 3.6e-41 171.8 105 77.1
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 8.0e-41 170.6 100 80.0
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 3.9e-40 168.3 103 74.8
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 5.2e-40 167.9 105 72.4
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 2.0e-39 166.0 126 61.1
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 5.7e-39 164.5 136 59.6
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 1.3e-38 163.3 128 62.5
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 2.2e-38 162.5 98 78.6
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 3.1e-37 158.7 98 76.5
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 1.2e-36 156.8 105 72.4
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 1.5e-34 149.8 92 77.2
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 1.8e-32 142.9 133 63.2
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 6.8e-32 141.0 133 60.2
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 1.4e-29 133.3 110 54.5
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 2.0e-28 129.4 124 53.2
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 5.5e-26 121.3 142 45.8
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 1.8e-24 116.3 70 81.4
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 2.2e-22 109.4 118 47.5
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 6.3e-22 107.8 63 82.5
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 2.0e-20 102.8 102 47.1
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 7.7e-20 100.9 67 71.6
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 1.5e-18 96.7 129 43.4
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 3.6e-17 92.0 129 38.0
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 4.1e-13 78.6 70 57.1
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 1.1e-10 70.5 89 40.4
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 1.5e-10 70.1 83 41.0
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 3.6e-09 65.5 47 57.4
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 1.0e-08 63.9 55 60.0
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 2.0e-07 59.7 36 66.7
CiPaw.01G195100 Carya illinoinensis HOM05D043421 ORTHO05D009298 3.4e-07 58.9 42 76.2
CiPaw.10G080400 Carya illinoinensis HOM05D043421 ORTHO05D009298 1.3e-06 57.0 42 76.2


User provided reference genes

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