Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 1.4e-254 882.5 439 100.0
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 1.0e-241 839.7 439 95.0
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 2.9e-241 838.2 439 94.8
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 5.5e-240 833.9 438 93.6
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 1.8e-238 828.9 439 92.0
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 1.2e-237 826.2 439 92.5
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 7.5e-237 823.5 439 91.6
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 9.7e-237 823.2 439 91.8
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 1.3e-236 822.8 439 91.6
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 1.7e-236 822.4 438 91.8
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 1.7e-236 822.4 443 91.2
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 2.2e-236 822.0 439 92.3
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 2.8e-236 821.6 439 92.3
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 2.8e-236 821.6 439 91.8
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 3.7e-236 821.2 439 91.8
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 4.8e-236 820.8 439 91.3
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 8.2e-236 820.1 439 90.9
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 1.1e-235 819.7 439 90.9
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 1.4e-235 819.3 439 91.6
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 1.4e-235 819.3 439 91.1
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 2.4e-235 818.5 440 92.5
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 4.1e-235 817.8 439 90.7
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 4.1e-235 817.8 467 86.9
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 4.1e-235 817.8 439 91.1
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 4.1e-235 817.8 439 90.7
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 5.3e-235 817.4 439 90.4
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 7.0e-235 817.0 439 90.4
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 2.0e-234 815.5 439 90.0
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 4.5e-234 814.3 439 90.7
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 4.5e-234 814.3 439 91.6
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 1.7e-233 812.4 439 90.2
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 2.9e-233 811.6 439 89.5
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 6.5e-233 810.4 449 89.3
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 1.9e-232 808.9 439 90.7
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 3.6e-231 804.7 440 90.0
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 4.7e-231 804.3 439 89.1
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 4.7e-231 804.3 439 89.3
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 6.1e-231 803.9 439 89.3
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 8.0e-231 803.5 439 88.4
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 1.4e-230 802.7 439 88.2
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 5.2e-230 800.8 439 87.5
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 5.2e-230 800.8 439 87.5
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 5.2e-230 800.8 439 87.5
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 8.8e-230 800.0 439 88.8
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 2.2e-228 795.4 439 87.7
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 6.3e-228 793.9 439 87.0
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 2.4e-227 792.0 439 88.2
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 1.2e-226 789.6 439 86.8
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 7.7e-226 786.9 439 86.8
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 1.0e-225 786.6 439 87.7
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 1.7e-225 785.8 439 87.0
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 2.5e-224 781.9 439 86.8
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 2.1e-223 778.9 439 85.9
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 4.0e-222 774.6 439 86.1
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 6.8e-222 773.9 440 83.4
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 8.9e-222 773.5 434 86.2
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 1.2e-221 773.1 542 74.0
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 2.0e-221 772.3 439 84.1
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 5.7e-221 770.8 439 84.3
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 3.7e-220 768.1 442 84.8
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 3.7e-220 768.1 439 83.8
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 3.7e-220 768.1 439 84.3
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 6.3e-220 767.3 439 82.9
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 6.3e-220 767.3 439 82.9
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 8.3e-220 766.9 439 82.9
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 1.1e-219 766.5 438 83.3
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 1.8e-219 765.8 439 85.2
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 2.4e-219 765.4 439 82.9
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 2.4e-219 765.4 439 82.7
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 9.2e-219 763.5 439 83.1
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 9.2e-219 763.5 439 83.1
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 1.2e-218 763.1 439 83.4
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 1.6e-218 762.7 439 82.7
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 2.0e-218 762.3 439 82.9
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 2.0e-218 762.3 439 82.9
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 2.0e-218 762.3 439 82.9
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 3.5e-218 761.5 439 83.1
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 3.5e-218 761.5 440 84.3
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 1.0e-217 760.0 439 83.8
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 1.3e-217 759.6 439 81.5
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 3.8e-217 758.1 439 83.1
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 6.6e-217 757.3 439 82.5
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 6.6e-217 757.3 439 82.5
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 6.6e-217 757.3 439 83.1
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 1.1e-216 756.5 439 81.8
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 1.5e-216 756.1 439 83.6
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 1.9e-216 755.7 439 83.4
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 2.5e-216 755.4 440 83.4
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 2.5e-216 755.4 439 83.1
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 9.5e-216 753.4 439 84.1
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 1.6e-215 752.7 452 82.5
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 2.8e-215 751.9 439 82.7
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 1.8e-214 749.2 439 82.5
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 3.7e-212 741.5 462 79.4
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 1.3e-209 733.0 439 81.8
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 2.3e-209 732.3 434 84.8
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 7.3e-208 727.2 440 79.8
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 1.1e-203 713.4 439 80.0
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 1.9e-203 712.6 439 78.4
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 1.6e-202 709.5 439 77.2
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 3.6e-199 698.4 439 79.5
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 2.3e-198 695.7 438 78.8
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 9.9e-197 690.3 441 76.4
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 4.6e-194 681.4 441 74.8
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 6.6e-193 677.6 357 92.4
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 2.0e-189 666.0 352 91.5
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 1.1e-184 650.2 397 82.1
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 7.8e-178 627.5 439 72.7
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 5.3e-174 614.8 439 70.6
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 2.4e-171 605.9 439 69.0
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 3.0e-169 599.0 440 64.8
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 8.7e-153 544.3 442 61.5
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 1.5e-152 543.5 481 56.8
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 5.7e-144 515.0 332 77.4
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 1.5e-133 480.3 358 65.6
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 3.6e-130 469.2 432 54.6
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 2.9e-87 326.6 254 61.8
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 3.2e-78 296.6 151 94.7
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 2.2e-63 247.3 130 91.5
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 9.3e-46 188.7 208 51.4
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 9.6e-43 178.7 419 30.3
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 4.3e-35 153.3 90 85.6
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 2.4e-25 120.9 66 84.8
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 1.2e-24 118.6 351 26.2
CDE05G3043 Ceratophyllum demersum HOM05D003397 ORTHO05D004390 7.0e-09 66.2 371 24.3
MCO15G166 Micromonas commoda HOM05D003397 ORTHO05D004390 1.3e-07 62.0 427 22.2
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 2.2e-07 61.2 30 90.0
Cfa022865 Carpinus fangiana HOM05D003397 ORTHO05D004390 2.5e-06 57.8 303 25.1


User provided reference genes

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