Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 4.1e-165 584.7 307 100.0
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 7.3e-106 387.9 320 70.3
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 1.3e-97 360.5 324 65.7
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 1.2e-92 344.0 320 60.6
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 1.2e-92 344.0 310 62.3
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 1.2e-92 344.0 321 60.7
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 5.6e-90 335.1 317 60.3
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 5.8e-87 325.1 324 57.4
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 6.4e-86 321.6 321 57.9
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 8.4e-86 321.2 325 59.4
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.4e-85 320.5 321 57.3
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 4.6e-84 315.5 323 57.3
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 1.3e-83 313.9 317 56.5
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 2.3e-83 313.2 219 76.3
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 3.9e-83 312.4 299 59.2
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 6.7e-83 311.6 299 59.2
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 6.7e-83 311.6 329 56.2
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 8.7e-83 311.2 319 56.1
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 8.7e-83 311.2 323 56.7
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.1e-82 310.8 302 58.6
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 1.1e-82 310.8 304 60.2
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.9e-82 310.1 267 62.9
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 2.5e-82 309.7 322 55.6
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 3.3e-82 309.3 318 57.5
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 8.1e-81 304.7 339 53.4
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 8.1e-81 304.7 328 55.2
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 1.1e-80 304.3 303 58.1
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 4.0e-80 302.4 338 52.1
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 4.0e-80 302.4 325 52.6
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 9.0e-80 301.2 274 60.6
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.5e-79 300.4 314 56.4
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 2.6e-79 299.7 348 52.3
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 4.5e-79 298.9 323 54.2
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 5.8e-79 298.5 302 57.0
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 1.3e-78 297.4 335 54.3
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.7e-78 297.0 313 56.2
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.7e-78 297.0 298 57.4
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 2.2e-78 296.6 304 56.9
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 3.8e-78 295.8 295 56.3
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 8.4e-78 294.7 323 58.2
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 8.4e-78 294.7 333 53.5
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 3.2e-77 292.7 332 53.0
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 5.5e-77 292.0 297 56.2
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 5.5e-77 292.0 345 52.5
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 5.5e-77 292.0 339 51.6
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 2.1e-76 290.0 324 54.0
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 6.0e-76 288.5 326 54.3
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 3.9e-75 285.8 334 53.9
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 8.7e-75 284.6 312 55.1
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 1.1e-74 284.3 335 54.0
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 1.5e-74 283.9 297 55.2
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 2.5e-74 283.1 326 54.0
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 4.3e-74 282.3 341 50.4
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 5.7e-74 282.0 313 54.3
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 7.4e-74 281.6 493 42.0
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 9.6e-74 281.2 355 49.0
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 6.3e-73 278.5 309 55.7
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 8.2e-73 278.1 354 49.2
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 1.4e-72 277.3 346 50.0
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.8e-72 276.9 304 55.3
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.7e-70 270.4 291 53.6
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 3.8e-70 269.2 353 48.7
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 3.8e-70 269.2 333 50.5
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 3.8e-70 269.2 318 52.5
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 6.5e-70 268.5 325 52.0
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 9.3e-69 264.6 319 51.1
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 9.3e-69 264.6 353 48.7
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 1.6e-68 263.8 333 49.2
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 2.1e-68 263.5 325 50.8
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 1.0e-67 261.2 318 52.2
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 3.9e-67 259.2 276 52.2
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 5.1e-67 258.8 322 49.1
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 5.1e-67 258.8 316 51.3
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 8.7e-67 258.1 336 49.4
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 8.7e-67 258.1 331 49.8
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 4.3e-66 255.8 329 49.8
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 7.4e-66 255.0 337 49.0
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 2.2e-65 253.4 318 50.3
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 2.2e-65 253.4 334 48.8
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 4.8e-65 252.3 321 49.5
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 1.1e-64 251.1 320 50.0
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 3.1e-64 249.6 290 51.0
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 1.2e-63 247.7 335 46.6
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 2.6e-63 246.5 335 46.3
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 2.6e-63 246.5 318 49.7
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 3.4e-63 246.1 229 59.0
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 7.7e-63 245.0 227 58.6
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 3.8e-62 242.7 267 54.7
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 6.5e-62 241.9 285 51.9
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 1.4e-61 240.7 324 48.5
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 1.4e-61 240.7 348 46.3
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 1.4e-61 240.7 329 45.9
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 1.4e-61 240.7 253 53.4
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 3.2e-61 239.6 310 50.0
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 5.5e-61 238.8 334 45.8
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 9.4e-61 238.0 354 45.5
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.6e-60 237.3 262 53.1
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 2.7e-60 236.5 305 48.5
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 3.6e-60 236.1 317 47.0
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 4.6e-60 235.7 322 47.8
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 2.3e-59 233.4 378 44.7
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 1.5e-58 230.7 379 42.7
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 1.5e-58 230.7 340 43.8
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 2.0e-58 230.3 273 52.4
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 2.6e-58 229.9 170 68.2
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 9.7e-58 228.0 262 50.8
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 2.8e-57 226.5 295 49.8
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 4.8e-57 225.7 316 46.5
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 1.1e-56 224.6 299 49.2
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 2.0e-55 220.3 294 47.3
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 2.9e-54 216.5 247 53.8
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 2.7e-52 209.9 266 51.1
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 1.4e-48 197.6 278 46.0
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 9.1e-48 194.9 314 44.6
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 1.6e-47 194.1 221 52.9
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 5.0e-46 189.1 330 42.7
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 6.5e-46 188.7 150 67.3
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 8.5e-46 188.3 281 42.0
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 1.8e-43 180.6 207 51.2
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 7.5e-42 175.3 265 41.9
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 1.3e-38 164.5 112 72.3
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 1.9e-37 160.6 114 70.2
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 1.0e-35 154.8 270 40.7
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 1.3e-33 147.9 158 52.5
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 2.8e-33 146.7 111 67.6
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 3.1e-32 143.3 310 39.0
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 5.4e-32 142.5 113 66.4
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 2.5e-29 133.7 189 46.0
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 4.7e-28 129.4 238 37.4
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 2.4e-24 117.1 180 45.0
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 4.3e-21 106.3 68 73.5
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 6.8e-19 99.0 102 48.0
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 5.7e-18 95.9 214 36.9
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 5.4e-16 89.4 81 55.6
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 9.2e-16 88.6 211 32.2
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 9.2e-16 88.6 211 32.2
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 1.0e-14 85.1 165 35.8
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 6.6e-14 82.4 86 47.7
QL03p064635 Quercus lobata HOM05D005155 ORTHO05D006266 1.8e-11 74.3 61 67.2
Lj1A800T39 Lonicera japonica HOM05D005155 ORTHO05D006266 2.9e-09 67.0 51 64.7
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 3.7e-09 66.6 156 34.0
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 2.7e-07 60.5 64 51.6
unitig_749.g13565 Utricularia gibba HOM05D005155 ORTHO05D006266 2.3e-06 57.4 132 34.8


User provided reference genes

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