Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G185700 Carya illinoinensis HOM05D003973 ORTHO05D004679 0.0e+00 1164.1 573 100.0
CiPaw.03G262600 Carya illinoinensis HOM05D003973 ORTHO05D004679 5.3e-275 950.7 544 86.9
Haze_24609 Corylus avellana HOM05D003973 ORTHO05D004679 1.0e-265 919.8 617 77.6
QL09p038243 Quercus lobata HOM05D003973 ORTHO05D004679 3.7e-260 901.4 567 80.6
Thecc.01G260300 Theobroma cacao HOM05D003973 ORTHO05D004679 1.1e-253 879.8 573 77.8
Manes.12G031400 Manihot esculenta HOM05D003973 ORTHO05D004679 2.6e-245 852.0 571 76.0
Dinv22416 Davidia involucrata HOM05D003973 ORTHO05D004679 2.8e-244 848.6 563 76.2
Potri.002G039900 Populus trichocarpa HOM05D003973 ORTHO05D004679 2.8e-244 848.6 597 74.0
Atru.chr5.1648 Acer truncatum HOM05D003973 ORTHO05D004679 1.2e-242 843.2 602 72.3
Ciclev10018809m.g Citrus clementina HOM05D003973 ORTHO05D004679 2.2e-241 839.0 579 74.3
COL.COLO4_05173 Corchorus olitorius HOM05D003973 ORTHO05D004679 3.8e-241 838.2 576 74.8
TWI12G0927 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 5.5e-240 834.3 575 73.4
Sabra02G0032000 Salix brachista HOM05D003973 ORTHO05D004679 6.1e-239 830.9 586 73.7
Actinidia12891 Actinidia chinensis HOM05D003973 ORTHO05D004679 1.8e-238 829.3 570 72.6
Potri.005G222800 Populus trichocarpa HOM05D003973 ORTHO05D004679 2.3e-238 828.9 586 73.9
TWI18G0068 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 5.7e-237 824.3 575 73.4
Duzib211G0218 Durio zibethinus HOM05D003973 ORTHO05D004679 9.7e-237 823.5 577 73.3
Gohir.D11G135600 Gossypium hirsutum HOM05D003973 ORTHO05D004679 2.8e-236 822.0 575 73.0
Gorai.007G145200 Gossypium raimondii HOM05D003973 ORTHO05D004679 2.4e-235 818.9 575 73.0
Gohir.A11G129900 Gossypium hirsutum HOM05D003973 ORTHO05D004679 5.3e-235 817.8 575 72.5
Hma1.2p1_0621F.1_g190820 Hydrangea macrophylla HOM05D003973 ORTHO05D004679 5.3e-235 817.8 575 72.9
Sabra05G0171500 Salix brachista HOM05D003973 ORTHO05D004679 5.9e-234 814.3 611 70.0
CSS0019197 Camellia sinensis var. sinensis HOM05D003973 ORTHO05D004679 2.9e-233 812.0 576 71.7
Cpa.g.sc50.33 Carica papaya HOM05D003973 ORTHO05D004679 5.0e-233 811.2 574 74.0
Gorai.004G072800 Gossypium raimondii HOM05D003973 ORTHO05D004679 1.2e-231 806.6 571 75.0
Gohir.A08G060000 Gossypium hirsutum HOM05D003973 ORTHO05D004679 2.3e-230 802.4 571 74.6
TWI75G1776 Tripterygium wilfordii HOM05D003973 ORTHO05D004679 1.2e-229 800.0 665 63.9
RcHm_v2.0_Chr6g0288391 Rosa chinensis HOM05D003973 ORTHO05D004679 7.5e-229 797.3 595 71.4
CANSAT01G0525 Cannabis sativa HOM05D003973 ORTHO05D004679 7.0e-227 790.8 582 71.3
MD10G1185900 Malus domestica HOM05D003973 ORTHO05D004679 2.0e-226 789.3 594 70.2
Duzib138G0375 Durio zibethinus HOM05D003973 ORTHO05D004679 5.0e-225 784.6 573 70.9
MD05G1199600 Malus domestica HOM05D003973 ORTHO05D004679 1.1e-224 783.5 595 70.1
Nn4g22928 Nelumbo nucifera HOM05D003973 ORTHO05D004679 1.5e-224 783.1 566 71.0
Rhsim13G0034000 Rhododendron simsii HOM05D003973 ORTHO05D004679 1.9e-224 782.7 592 69.4
Lalb_Chr06g0170381 Lupinus albus HOM05D003973 ORTHO05D004679 2.5e-224 782.3 577 71.1
Glyma.13G122200 Glycine max HOM05D003973 ORTHO05D004679 5.5e-224 781.2 576 69.3
Glyma.10G035800 Glycine max HOM05D003973 ORTHO05D004679 2.1e-223 779.2 575 69.6
FAN27G0583 Fragaria x ananassa HOM05D003973 ORTHO05D004679 2.8e-223 778.9 596 69.1
TPR.G16308 Trifolium pratense HOM05D003973 ORTHO05D004679 2.8e-223 778.9 575 70.6
arahy.Tifrunner.gnm1.ann1.M1CRL2 Arachis hypogaea HOM05D003973 ORTHO05D004679 4.7e-223 778.1 580 71.7
Gohir.A08G189300 Gossypium hirsutum HOM05D003973 ORTHO05D004679 6.1e-223 777.7 573 70.3
Dinv34610 Davidia involucrata HOM05D003973 ORTHO05D004679 8.0e-223 777.3 572 71.0
Gohir.D08G207800 Gossypium hirsutum HOM05D003973 ORTHO05D004679 1.0e-222 776.9 573 70.3
Medtr7g096680 Medicago truncatula HOM05D003973 ORTHO05D004679 1.5e-221 773.1 603 68.0
arahy.Tifrunner.gnm1.ann1.0L9E2L Arachis hypogaea HOM05D003973 ORTHO05D004679 4.4e-221 771.5 576 71.5
Lalb_Chr02g0152311 Lupinus albus HOM05D003973 ORTHO05D004679 5.7e-221 771.2 577 70.9
TAR362G0234 Trochodendron aralioides HOM05D003973 ORTHO05D004679 7.5e-221 770.8 567 71.6
TAR633G0700 Trochodendron aralioides HOM05D003973 ORTHO05D004679 1.3e-220 770.0 568 70.4
Ca_09689_v3 Cicer arietinum L. HOM05D003973 ORTHO05D004679 4.1e-219 765.0 600 68.8
Lj1g0003934 Lotus japonicus HOM05D003973 ORTHO05D004679 4.1e-219 765.0 573 71.2
Prupe.8G225400 Prunus persica HOM05D003973 ORTHO05D004679 9.2e-219 763.8 585 69.4
FvH4_2g21710 Fragaria vesca HOM05D003973 ORTHO05D004679 2.7e-218 762.3 596 68.1
Lj5g0017930 Lotus japonicus HOM05D003973 ORTHO05D004679 1.3e-217 760.0 575 69.6
FAN24G2194 Fragaria x ananassa HOM05D003973 ORTHO05D004679 6.6e-217 757.7 619 65.9
Psat3g058480 Pisum sativum HOM05D003973 ORTHO05D004679 1.9e-216 756.1 644 63.4
FAN15G1892 Fragaria x ananassa HOM05D003973 ORTHO05D004679 3.3e-216 755.4 620 65.6
Medtr1g070160 Medicago truncatula HOM05D003973 ORTHO05D004679 3.3e-216 755.4 578 70.1
Duzib133G1136 Durio zibethinus HOM05D003973 ORTHO05D004679 9.5e-216 753.8 573 69.5
FAN20G1573 Fragaria x ananassa HOM05D003973 ORTHO05D004679 9.5e-216 753.8 597 67.5
Eucgr.B01536 Eucalyptus grandis HOM05D003973 ORTHO05D004679 2.3e-214 749.2 576 68.4
PGSC0003DMG400031378 Solanum tuberosum HOM05D003973 ORTHO05D004679 6.8e-214 747.7 577 67.4
VMungo1383G0117 Vigna mungo HOM05D003973 ORTHO05D004679 2.6e-213 745.7 566 70.3
Glyma.03G162100 Glycine max HOM05D003973 ORTHO05D004679 7.5e-213 744.2 580 69.8
TPR.G3551 Trifolium pratense HOM05D003973 ORTHO05D004679 1.1e-211 740.3 577 69.7
CAN.G194.11 Capsicum annuum HOM05D003973 ORTHO05D004679 5.4e-211 738.0 573 67.0
Oeu026512.1 Olea europaea HOM05D003973 ORTHO05D004679 5.4e-211 738.0 576 66.3
Cc11_g02590 Coffea canephora HOM05D003973 ORTHO05D004679 2.0e-210 736.1 573 67.5
Glyma.19G163500 Glycine max HOM05D003973 ORTHO05D004679 5.9e-210 734.6 580 68.8
PGR044G1639 Punica granatum HOM05D003973 ORTHO05D004679 1.9e-208 729.6 600 65.3
Sed0015853 Sechium edule HOM05D003973 ORTHO05D004679 1.2e-207 726.9 583 66.6
MBI17_g07970_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 1.6e-207 726.5 569 67.5
Nitab4.5_0000129g0340 Nicotiana tabacum HOM05D003973 ORTHO05D004679 1.6e-207 726.5 571 66.9
MSTRG.18316 Avicennia marina HOM05D003973 ORTHO05D004679 1.8e-206 723.0 571 64.8
Nitab4.5_0001419g0010 Nicotiana tabacum HOM05D003973 ORTHO05D004679 1.8e-206 723.0 571 66.7
Phvul.001G159900 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 1.5e-205 719.9 567 69.5
Solyc04g008630.3 Solanum lycopersicum HOM05D003973 ORTHO05D004679 2.0e-205 719.5 609 63.1
Sopen04g003790 Solanum pennellii HOM05D003973 ORTHO05D004679 2.6e-205 719.2 609 63.1
GSVIVG01028304001 Vitis vinifera HOM05D003973 ORTHO05D004679 8.3e-204 714.1 571 66.0
Lsat_1_v5_gn_9_8721 Lactuca sativa HOM05D003973 ORTHO05D004679 1.9e-203 713.0 576 66.5
Sed0025131 Sechium edule HOM05D003973 ORTHO05D004679 1.9e-203 713.0 584 65.6
MELO3C012904.2 Cucumis melo HOM05D003973 ORTHO05D004679 2.4e-203 712.6 583 65.7
ClCG07G000970 Citrullus lanatus HOM05D003973 ORTHO05D004679 4.1e-203 711.8 586 65.4
CsaV3_3G022520 Cucumis sativus L. HOM05D003973 ORTHO05D004679 1.0e-201 707.2 593 64.8
Peaxi162Scf00329g00811 Petunia axillaris HOM05D003973 ORTHO05D004679 1.0e-201 707.2 609 62.2
vmacro02653 Vaccinium macrocarpon HOM05D003973 ORTHO05D004679 2.3e-201 706.1 571 66.9
SalBow4G2825 Salvia bowleyana HOM05D003973 ORTHO05D004679 6.6e-201 704.5 612 61.9
arahy.Tifrunner.gnm1.ann1.61T5XF Arachis hypogaea HOM05D003973 ORTHO05D004679 8.6e-201 704.1 573 65.1
ECA247G3763 Erigeron canadensis HOM05D003973 ORTHO05D004679 8.6e-201 704.1 569 66.8
arahy.Tifrunner.gnm1.ann1.B4WKJK Arachis hypogaea HOM05D003973 ORTHO05D004679 1.1e-200 703.7 573 64.7
DCAR_005697 Daucus carota HOM05D003973 ORTHO05D004679 6.2e-199 698.0 565 65.0
HanXRQChr10g0281061 Helianthus annuus HOM05D003973 ORTHO05D004679 6.8e-198 694.5 577 64.3
PSO063G1318 Papaver somniferum HOM05D003973 ORTHO05D004679 2.0e-197 693.0 561 64.0
PSO782G1372 Papaver somniferum HOM05D003973 ORTHO05D004679 9.9e-197 690.6 576 62.3
Thhalv10016226m.g Eutrema salsugineum HOM05D003973 ORTHO05D004679 1.7e-193 679.9 587 64.4
AL4G26480 Arabidopsis lyrata HOM05D003973 ORTHO05D004679 2.3e-193 679.5 577 65.0
Aqoxy1G00848 Aquilegia oxysepala HOM05D003973 ORTHO05D004679 1.1e-192 677.2 561 65.1
Lj2A1153G48 Lonicera japonica HOM05D003973 ORTHO05D004679 1.5e-192 676.8 570 64.6
Sp4g13740 Schrenkiella parvula HOM05D003973 ORTHO05D004679 7.3e-192 674.5 579 64.4
THA.LOC104800875 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 7.3e-192 674.5 590 63.1
Gohir.D08G069200 Gossypium hirsutum HOM05D003973 ORTHO05D004679 1.6e-191 673.3 571 65.0
THA.LOC104826212 Tarenaya hassleriana HOM05D003973 ORTHO05D004679 6.2e-191 671.4 594 62.5
AT2G31260 Arabidopsis thaliana HOM05D003973 ORTHO05D004679 3.1e-190 669.1 579 64.1
HanXRQChr15g0467921 Helianthus annuus HOM05D003973 ORTHO05D004679 8.9e-190 667.5 577 63.1
DCAR_000939 Daucus carota HOM05D003973 ORTHO05D004679 1.5e-189 666.8 615 59.5
Migut.D00414 Erythranthe guttata HOM05D003973 ORTHO05D004679 2.0e-189 666.4 568 63.9
Carub.0004s1253 Capsella rubella HOM05D003973 ORTHO05D004679 2.9e-188 662.5 578 64.2
C04p60770 Brassica napus HOM05D003973 ORTHO05D004679 1.4e-187 660.2 582 63.6
BcaB06g28520 Brassica carinata HOM05D003973 ORTHO05D004679 1.9e-187 659.8 581 63.2
BolC4t27568H Brassica oleracea HOM05D003973 ORTHO05D004679 1.9e-187 659.8 581 63.2
CARHR124850 Cardamine hirsuta HOM05D003973 ORTHO05D004679 1.2e-186 657.1 594 61.4
Gorai.004G220200 Gossypium raimondii HOM05D003973 ORTHO05D004679 2.7e-186 656.0 457 73.5
BcaB02g10369 Brassica carinata HOM05D003973 ORTHO05D004679 1.7e-185 653.3 592 62.7
A04p24090 Brassica napus HOM05D003973 ORTHO05D004679 6.6e-185 651.4 581 62.8
Oeu039681.1 Olea europaea HOM05D003973 ORTHO05D004679 1.1e-184 650.6 574 62.4
Ah.11g049650 Amaranthus hybridus HOM05D003973 ORTHO05D004679 2.1e-183 646.4 589 59.4
Lj1A65T50 Lonicera japonica HOM05D003973 ORTHO05D004679 9.0e-182 641.0 529 65.2
BcaB06g28436 Brassica carinata HOM05D003973 ORTHO05D004679 1.3e-180 637.1 596 59.9
EL10Ac5g10415 Beta vulgaris HOM05D003973 ORTHO05D004679 3.8e-180 635.6 658 53.5
Aa31LG5G5690 Aethionema arabicum HOM05D003973 ORTHO05D004679 6.4e-180 634.8 487 68.6
BraA04t17928Z Brassica rapa HOM05D003973 ORTHO05D004679 8.4e-180 634.4 518 66.0
Phvul.007G194300 Phaseolus vulgaris HOM05D003973 ORTHO05D004679 2.6e-173 612.8 595 56.0
Oeu058816.4 Olea europaea HOM05D003973 ORTHO05D004679 2.7e-170 602.8 665 52.9
SHI09836 Sapria himalayana HOM05D003973 ORTHO05D004679 1.5e-165 587.0 623 53.6
SGA_v2.0_scaffold138G35249 Striga asiatica HOM05D003973 ORTHO05D004679 2.2e-164 583.2 564 58.7
Hund09596 Selenicereus undatus HOM05D003973 ORTHO05D004679 3.8e-164 582.4 590 56.4
HanXRQChr08g0217761 Helianthus annuus HOM05D003973 ORTHO05D004679 4.9e-164 582.0 561 57.4
Psat6g055320 Pisum sativum HOM05D003973 ORTHO05D004679 3.2e-163 579.3 614 56.4
Os03g0248000 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 1.8e-158 563.5 582 54.3
HPP92_008425 Vanilla planifolia HOM05D003973 ORTHO05D004679 1.1e-155 554.3 527 57.3
unitig_0.g154 Utricularia gibba HOM05D003973 ORTHO05D004679 4.2e-155 552.4 537 55.9
MBI18_g15332_MAGBIO Magnolia biondii HOM05D003973 ORTHO05D004679 3.5e-154 549.3 502 58.8
Zm00001eb010620 Zea mays HOM05D003973 ORTHO05D004679 3.5e-154 549.3 572 53.0
AUR62024730 Chenopodium quinoa HOM05D003973 ORTHO05D004679 6.3e-151 538.5 530 55.8
Os10g0163100 Oryza sativa ssp. japonica HOM05D003973 ORTHO05D004679 1.2e-149 534.3 610 51.1
Nn3g17035 Nelumbo nucifera HOM05D003973 ORTHO05D004679 1.7e-148 530.4 303 87.1
AUR62011889 Chenopodium quinoa HOM05D003973 ORTHO05D004679 1.1e-142 511.1 606 50.0
ATR0680G230 Amborella trichopoda HOM05D003973 ORTHO05D004679 1.2e-141 507.7 531 54.4
ATR0559G363 Amborella trichopoda HOM05D003973 ORTHO05D004679 1.5e-141 507.3 548 52.2
AUR62024729 Chenopodium quinoa HOM05D003973 ORTHO05D004679 5.9e-141 505.4 448 60.3
Sc17g0000740 Simmondsia chinensis HOM05D003973 ORTHO05D004679 7.2e-139 498.4 293 84.0
SEGI_30090 Sequoiadendron giganteum HOM05D003973 ORTHO05D004679 9.4e-139 498.0 532 52.3
HPP92_008421 Vanilla planifolia HOM05D003973 ORTHO05D004679 1.4e-137 494.2 326 73.3
ECA236G2624 Erigeron canadensis HOM05D003973 ORTHO05D004679 6.7e-129 465.3 570 48.9
Ah.02g111890 Amaranthus hybridus HOM05D003973 ORTHO05D004679 6.3e-127 458.8 509 52.8
SMO239G0162 Selaginella moellendorffii HOM05D003973 ORTHO05D004679 1.6e-117 427.6 319 65.5
Pp3c2_1820 Physcomitrium patens HOM05D003973 ORTHO05D004679 6.1e-114 415.6 613 39.5
CDE06G1379 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 1.5e-112 411.0 475 50.3
Mapoly0002s0148 Marchantia polymorpha HOM05D003973 ORTHO05D004679 1.5e-112 411.0 586 39.8
CBR_g24398 Chara braunii HOM05D003973 ORTHO05D004679 2.8e-111 406.8 319 60.5
Pp3c10_9800 Physcomitrium patens HOM05D003973 ORTHO05D004679 1.2e-109 401.4 595 40.5
BraA05t20372Z Brassica rapa HOM05D003973 ORTHO05D004679 6.1e-106 389.0 335 63.6
A05p14440 Brassica napus HOM05D003973 ORTHO05D004679 4.1e-102 376.3 335 61.5
CDE02G3928 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 2.1e-77 294.3 204 70.6
BcaB06g28438 Brassica carinata HOM05D003973 ORTHO05D004679 4.0e-73 280.0 159 88.1
AagrBONN_evm.TU.Sc2ySwM_117.1675 Anthoceros agrestis HOM05D003973 ORTHO05D004679 6.8e-73 279.3 303 45.9
MCO05G121 Micromonas commoda HOM05D003973 ORTHO05D004679 7.1e-70 269.2 321 41.4
Cre09.g391500 Chlamydomonas reinhardtii HOM05D003973 ORTHO05D004679 3.3e-67 260.4 318 41.8
VMungo0720G0690 Vigna mungo HOM05D003973 ORTHO05D004679 1.9e-62 244.6 156 77.6
unitig_60.g25752 Utricularia gibba HOM05D003973 ORTHO05D004679 1.8e-57 228.0 347 39.2
Cfa025050 Carpinus fangiana HOM05D003973 ORTHO05D004679 2.6e-40 171.0 252 35.7
Sc17g0000730 Simmondsia chinensis HOM05D003973 ORTHO05D004679 1.3e-36 158.7 368 33.2
Psat2g015440 Pisum sativum HOM05D003973 ORTHO05D004679 1.1e-35 155.6 197 49.2
PRCOL_00006952 Prasinoderma coloniale HOM05D003973 ORTHO05D004679 2.8e-26 124.4 237 31.6
Hund02908 Selenicereus undatus HOM05D003973 ORTHO05D004679 2.6e-24 117.9 78 75.6
VMungo0720G0978 Vigna mungo HOM05D003973 ORTHO05D435101 3.4e-24 117.5 181 39.8
BcaB06g28437 Brassica carinata HOM05D003973 ORTHO05D004679 1.0e-20 105.9 373 29.5
CSS0024912 Camellia sinensis var. sinensis HOM05D003973 ORTHO05D004679 2.3e-20 104.8 74 71.6
AagrBONN_evm.TU.Sc2ySwM_344.134 Anthoceros agrestis HOM05D003973 ORTHO05D004679 1.5e-19 102.1 73 61.6
Hund02909 Selenicereus undatus HOM05D003973 ORTHO05D004679 1.5e-19 102.1 118 53.4
VMungo0251G0786 Vigna mungo HOM05D003973 ORTHO05D432747 7.2e-14 83.2 74 62.2
CDE06G1301 Ceratophyllum demersum HOM05D003973 ORTHO05D004679 2.3e-12 78.2 49 79.6


User provided reference genes

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