Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 6.4e-115 417.5 229 100.0
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 7.9e-89 330.9 232 81.0
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 9.4e-82 307.4 231 74.5
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 3.6e-73 278.9 234 68.8
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 6.1e-73 278.1 233 68.7
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 1.0e-72 277.3 235 68.9
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 1.8e-72 276.6 231 71.4
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 8.8e-72 274.2 234 68.8
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 2.0e-71 273.1 236 69.5
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 1.3e-70 270.4 236 66.9
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.3e-70 270.4 241 66.8
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.3e-70 270.4 239 68.2
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 4.8e-70 268.5 235 68.5
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 1.8e-69 266.5 235 66.0
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 4.1e-69 265.4 238 67.2
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 7.0e-69 264.6 232 66.4
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 2.0e-68 263.1 238 66.0
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 3.5e-68 262.3 235 65.1
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 7.7e-68 261.2 233 68.2
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 1.3e-67 260.4 232 65.1
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 5.0e-67 258.5 237 65.0
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 5.0e-67 258.5 236 64.8
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 8.5e-67 257.7 215 69.3
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 1.5e-66 256.9 239 65.3
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 1.9e-66 256.5 235 63.4
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 4.2e-66 255.4 232 64.2
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 4.2e-66 255.4 236 64.4
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 5.5e-66 255.0 233 64.8
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 9.4e-66 254.2 244 63.1
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 2.1e-65 253.1 232 66.8
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 3.6e-65 252.3 233 65.7
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 6.1e-65 251.5 258 62.4
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 2.3e-64 249.6 236 64.4
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 3.0e-64 249.2 239 62.8
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 3.0e-64 249.2 229 62.9
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 5.2e-64 248.4 231 63.2
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.2e-63 247.3 234 63.2
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 1.5e-63 246.9 235 62.6
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 3.4e-63 245.7 232 62.1
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 4.8e-62 241.9 235 62.1
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 1.1e-61 240.7 222 64.0
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 2.4e-61 239.6 235 60.9
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 3.1e-61 239.2 233 60.5
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 9.1e-61 237.7 232 61.2
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 4.5e-60 235.3 234 60.3
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 7.7e-60 234.6 234 62.8
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.3e-59 233.8 235 61.3
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 2.2e-59 233.0 240 60.4
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 2.9e-59 232.6 233 60.9
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.8e-59 232.3 219 62.6
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 6.5e-59 231.5 219 62.6
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.5e-59 231.5 219 62.6
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 1.5e-58 230.3 231 59.7
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.5e-58 230.3 231 60.2
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 1.5e-58 230.3 231 61.5
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.2e-58 229.2 219 62.1
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.1e-57 226.5 236 58.5
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 3.0e-56 222.6 235 58.3
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 3.0e-56 222.6 241 60.2
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 5.2e-56 221.9 232 60.8
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 6.8e-56 221.5 230 58.7
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 6.8e-56 221.5 230 56.5
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 1.2e-55 220.7 229 56.8
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 2.0e-55 219.9 241 57.3
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 2.6e-55 219.5 237 59.5
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 2.6e-55 219.5 237 57.8
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 3.4e-55 219.2 207 59.4
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 5.7e-55 218.4 233 58.8
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 1.3e-54 217.2 229 58.1
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.7e-54 216.9 221 59.7
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.7e-54 216.9 226 57.5
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.2e-54 216.5 149 78.5
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 2.8e-54 216.1 226 57.5
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 4.8e-54 215.3 253 54.5
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 1.1e-53 214.2 227 57.7
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 2.4e-53 213.0 170 69.4
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.4e-53 213.0 175 69.1
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 3.1e-53 212.6 229 57.2
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 5.4e-53 211.8 229 55.9
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 9.1e-53 211.1 227 57.3
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 3.5e-52 209.1 239 57.3
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 3.5e-52 209.1 232 56.5
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 3.5e-52 209.1 233 54.9
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 4.5e-52 208.8 217 58.5
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 4.5e-52 208.8 194 61.9
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 5.9e-52 208.4 218 58.3
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.3e-51 207.2 235 54.9
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 1.3e-51 207.2 206 55.3
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 1.3e-51 207.2 206 55.3
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 1.7e-51 206.8 234 57.3
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 2.3e-51 206.5 234 55.1
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 2.3e-51 206.5 226 55.8
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 5.0e-51 205.3 234 54.3
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 3.3e-50 202.6 246 52.8
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 5.5e-50 201.8 148 73.0
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.6e-49 200.3 147 72.8
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 4.7e-49 198.7 232 54.3
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 6.1e-49 198.4 255 51.4
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.4e-48 197.2 147 72.1
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 1.5e-47 193.7 195 57.9
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 2.0e-47 193.4 147 68.0
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 7.5e-47 191.4 225 52.9
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 1.3e-46 190.7 268 49.3
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 6.3e-46 188.3 201 60.2
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 1.8e-45 186.8 229 52.4
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 3.2e-45 186.0 174 62.6
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 7.0e-45 184.9 168 58.3
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 2.0e-44 183.3 174 64.9
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 8.0e-41 171.4 232 50.0
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 5.2e-40 168.7 197 58.9
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 8.9e-40 167.9 200 54.5
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 6.6e-35 151.8 140 63.6
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 1.5e-34 150.6 128 64.1
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 6.2e-33 145.2 172 54.7
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 1.1e-32 144.4 128 60.9
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 7.1e-29 131.7 144 51.4
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.0e-27 127.9 149 47.0
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 5.6e-26 122.1 144 48.6
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.1e-24 117.9 145 49.0
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 3.7e-22 109.4 104 54.8
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 8.6e-19 98.2 75 68.0
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.2e-17 94.4 111 54.1
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.1e-16 89.7 106 46.2
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 5.2e-16 89.0 105 49.5
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 4.8e-09 65.9 80 50.0


User provided reference genes

Program Settings