Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G167400 Carya illinoinensis HOM05D009481 ORTHO05D011450 3.5e-22 107.5 56 100.0
Dinv36594 Davidia involucrata HOM05D002035 ORTHO05D002032 3.4e-17 90.9 42 85.7
Thecc.09G116600 Theobroma cacao HOM05D009481 ORTHO05D011450 7.5e-17 89.7 44 86.4
Phvul.003G176000 Phaseolus vulgaris HOM05D009481 ORTHO05D011450 2.2e-16 88.2 56 69.6
Hma1.2p1_0018F.1_g013080 Hydrangea macrophylla HOM05D009481 ORTHO05D011450 2.4e-15 84.7 44 81.8
Manes.16G064250 Manihot esculenta HOM05D009481 ORTHO05D011450 2.0e-14 81.6 40 82.5
Migut.I00838 Erythranthe guttata HOM05D009481 ORTHO05D011450 3.5e-14 80.9 40 82.5
Os05g0178300 Oryza sativa ssp. japonica HOM05D009481 ORTHO05D011450 1.7e-13 78.6 44 72.7
Os01g0178300 Oryza sativa ssp. japonica HOM05D009481 ORTHO05D011450 2.3e-13 78.2 44 70.5
CSS0010273 Camellia sinensis var. sinensis HOM05D009481 ORTHO05D011450 3.3e-12 74.3 40 72.5
Hma1.2p1_0682F.1_g202580 Hydrangea macrophylla HOM05D009481 ORTHO05D011450 7.3e-12 73.2 40 75.0
CSS0018590 Camellia sinensis var. sinensis HOM05D009481 ORTHO05D011450 2.1e-11 71.6 40 72.5
Glyma.13G361300 Glycine max HOM05D009481 ORTHO05D011450 3.1e-10 67.8 52 67.3
GSVIVG01015452001 Vitis vinifera HOM05D009481 ORTHO05D011450 8.9e-10 66.2 35 71.4
PSO782G4431 Papaver somniferum HOM05D009481 ORTHO05D011450 2.0e-09 65.1 40 60.0
Mapoly0083s0095 Marchantia polymorpha HOM05D009481 ORTHO05D011450 2.6e-09 64.7 40 60.0
Glyma.15G012600 Glycine max HOM05D009481 ORTHO05D011450 7.5e-09 63.2 56 64.3
Os02g0208500 Oryza sativa ssp. japonica HOM05D009481 ORTHO05D011450 7.5e-09 63.2 39 66.7
Eucgr.F02575 Eucalyptus grandis HOM05D009481 ORTHO05D011450 9.8e-09 62.8 44 56.8
Os06g0143100 Oryza sativa ssp. japonica HOM05D009481 ORTHO05D011450 7.0e-07 56.6 37 59.5
Phvul.005G173100 Phaseolus vulgaris HOM05D009481 ORTHO05D011450 9.2e-07 56.2 54 64.8
Thecc.06G081800 Theobroma cacao HOM05D009481 ORTHO05D011450 4.6e-06 53.9 44 56.8
Gohir.D05G022201 Gossypium hirsutum HOM05D027988 ORTHO05D011450 6.0e-06 53.5 35 62.9
Gorai.009G022500 Gossypium raimondii HOM05D027988 ORTHO05D011450 6.0e-06 53.5 35 62.9
Thecc.09G116500 Theobroma cacao HOM05D027988 ORTHO05D011450 7.8e-06 53.1 35 62.9


User provided reference genes

Program Settings