Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G150200 Carya illinoinensis HOM05D001309 ORTHO05D000385 4.2e-59 231.1 112 100.0
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 7.7e-29 130.6 83 73.5
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.9e-28 128.6 83 72.3
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.9e-27 125.9 83 69.9
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 3.2e-27 125.2 83 69.9
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 6.8e-09 64.3 73 37.0
Nitab4.5_0005765g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.8e-09 63.9 85 37.6
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 4.4e-08 61.6 67 38.8
Nitab4.5_0003339g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.4e-08 61.6 83 37.3
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 5.7e-08 61.2 66 36.4
Gohir.A12G105966 Gossypium hirsutum HOM05D040140 ORTHO05D000385 7.5e-08 60.8 86 36.0
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 7.5e-08 60.8 103 31.1
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.5e-08 60.8 65 36.9
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 9.8e-08 60.5 61 36.1
Phvul.008G147600 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 9.8e-08 60.5 61 44.3
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 1.7e-07 59.7 65 35.4
Nitab4.5_0001645g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-07 59.3 64 40.6
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-07 59.3 79 36.7
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.7e-07 58.5 67 38.8
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.8e-07 58.2 65 35.4
Nn3g20149 Nelumbo nucifera HOM05D001309 ORTHO05D000385 4.8e-07 58.2 65 38.5
Nitab4.5_0000522g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.8e-07 58.2 69 36.2
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.8e-07 58.2 67 40.3
Nitab4.5_0007229g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.8e-07 58.2 108 31.5
Zm00001eb234630 Zea mays HOM05D008576 ORTHO05D000385 4.8e-07 58.2 84 33.3
Gohir.A01G193333 Gossypium hirsutum HOM05D021375 ORTHO05D022808 6.3e-07 57.8 82 35.4
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.3e-07 57.8 67 32.8
Nn1g09472 Nelumbo nucifera HOM05D001309 ORTHO05D000385 6.3e-07 57.8 65 33.8
Nitab4.5_0000999g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.3e-07 57.8 79 35.4
Zm00001eb438630 Zea mays HOM05D008576 ORTHO05D000385 6.3e-07 57.8 84 33.3
Gohir.A06G124402 Gossypium hirsutum HOM05D008576 ORTHO05D000385 8.3e-07 57.4 59 44.1
Nitab4.5_0000577g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.3e-07 57.4 95 32.6
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 1.1e-06 57.0 61 32.8
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.1e-06 57.0 66 34.8
Nitab4.5_0008635g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-06 57.0 67 37.3
Zm00001eb184880 Zea mays HOM05D008576 ORTHO05D000385 1.1e-06 57.0 84 33.3
Os04g0609900 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 1.4e-06 56.6 65 36.9
COL.COLO4_05115 Corchorus olitorius HOM05D001309 ORTHO05D004434 1.8e-06 56.2 92 32.6
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 1.8e-06 56.2 67 37.3
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 1.8e-06 56.2 66 33.3
MBI09_g15192_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.8e-06 56.2 67 34.3
Nitab4.5_0002394g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-06 56.2 67 37.3
Nitab4.5_0003905g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-06 56.2 75 36.0
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.4e-06 55.8 92 32.6
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 3.1e-06 55.5 61 34.4
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 3.1e-06 55.5 61 34.4
Zm00001eb425380 Zea mays HOM05D008576 ORTHO05D000385 3.1e-06 55.5 67 34.3
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 4.1e-06 55.1 62 40.3
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 4.1e-06 55.1 92 32.6
COL.COLO4_21802 Corchorus olitorius HOM05D001309 ORTHO05D000385 4.1e-06 55.1 92 32.6
Haze_13385 Corylus avellana HOM05D011287 ORTHO05D013061 4.1e-06 55.1 83 32.5
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 4.1e-06 55.1 61 31.1
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 4.1e-06 55.1 61 31.1
Nitab4.5_0006078g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-06 55.1 85 32.9
Zm00001eb333630 Zea mays HOM05D008576 ORTHO05D000385 4.1e-06 55.1 84 32.1
Gohir.A10G125500 Gossypium hirsutum HOM05D001309 ORTHO05D000385 5.4e-06 54.7 59 42.4
MBI13_g26301_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.4e-06 54.7 65 35.4
Nitab4.5_0001481g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.4e-06 54.7 67 37.3
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.4e-06 54.7 63 41.3
Zm00001eb439020 Zea mays HOM05D008576 ORTHO05D000385 5.4e-06 54.7 83 32.5
MBI05_g40697_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.0e-06 54.3 65 33.8
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.0e-06 54.3 67 31.3
Nitab4.5_0000581g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.0e-06 54.3 74 37.8
AUR62041080 Chenopodium quinoa HOM05D008576 ORTHO05D000385 9.1e-06 53.9 81 29.6
Hma1.2p1_2026F.1_g311550 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 9.1e-06 53.9 59 42.4
Nitab4.5_0005861g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.1e-06 53.9 70 35.7
Zm00001eb181050 Zea mays HOM05D008576 ORTHO05D000385 9.1e-06 53.9 60 36.7
Zm00001eb267220 Zea mays HOM05D008576 ORTHO05D000385 9.1e-06 53.9 60 36.7
Zm00001eb380870 Zea mays HOM05D008576 ORTHO05D000385 9.1e-06 53.9 60 36.7


User provided reference genes

Program Settings