Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G143300 Carya illinoinensis HOM05D002335 ORTHO05D006692 6.3e-108 394.0 189 100.0
QL11p000707 Quercus lobata HOM05D002335 ORTHO05D006692 2.9e-97 358.6 188 88.3
Cfa002991 Carpinus fangiana HOM05D002335 ORTHO05D006692 1.1e-96 356.7 189 86.8
Haze_26010 Corylus avellana HOM05D002335 ORTHO05D006692 4.2e-96 354.8 187 87.2
Potri.018G065800 Populus trichocarpa HOM05D002335 ORTHO05D006692 1.2e-93 346.7 183 85.8
GSVIVG01015085001 Vitis vinifera HOM05D002335 ORTHO05D006692 9.7e-93 343.6 184 84.8
TAR626G0579 Trochodendron aralioides HOM05D002335 ORTHO05D006692 3.7e-92 341.7 184 82.6
Lj4g0006964 Lotus japonicus HOM05D002335 ORTHO05D006692 8.2e-92 340.5 185 82.7
Phvul.003G130900 Phaseolus vulgaris HOM05D002335 ORTHO05D006692 1.1e-91 340.1 187 82.9
Ciclev10009634m.g Citrus clementina HOM05D002335 ORTHO05D006692 3.1e-91 338.6 184 82.6
TWI34G0950 Tripterygium wilfordii HOM05D002335 ORTHO05D006692 5.3e-91 337.8 184 83.7
Glyma.17G049400 Glycine max HOM05D002335 ORTHO05D006692 7.0e-91 337.4 181 83.4
Glyma.13G110300 Glycine max HOM05D002335 ORTHO05D006692 9.1e-91 337.0 180 83.9
Potri.006G142000 Populus trichocarpa HOM05D002335 ORTHO05D006692 9.1e-91 337.0 183 83.1
CSS0035766 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006692 3.5e-90 335.1 184 82.6
CSS0046237 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006692 3.5e-90 335.1 184 82.6
Manes.03G040300 Manihot esculenta HOM05D002335 ORTHO05D006692 5.9e-90 334.3 184 81.0
COL.COLO4_18100 Corchorus olitorius HOM05D002335 ORTHO05D006692 1.0e-89 333.6 203 76.4
ClCG03G015100 Citrullus lanatus HOM05D002335 ORTHO05D006692 1.3e-89 333.2 185 81.1
MELO3C015519.2 Cucumis melo HOM05D002335 ORTHO05D006692 2.9e-89 332.0 185 81.1
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 3.8e-89 331.6 182 80.8
BcaB06g26882 Brassica carinata HOM05D002335 ORTHO05D006692 6.5e-89 330.9 182 80.8
VMungo1215G3327 Vigna mungo HOM05D002335 ORTHO05D006692 6.5e-89 330.9 190 80.5
CsaV3_1G041010 Cucumis sativus L. HOM05D002335 ORTHO05D006692 8.5e-89 330.5 185 80.5
AT2G06010 Arabidopsis thaliana HOM05D002335 ORTHO05D006692 1.1e-88 330.1 182 80.8
BcaC06g35951 Brassica carinata HOM05D002335 ORTHO05D006692 1.1e-88 330.1 182 80.2
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 1.1e-88 330.1 178 82.0
Eucgr.C03267 Eucalyptus grandis HOM05D002335 ORTHO05D006692 1.1e-88 330.1 185 80.0
Carub.0003s2714 Capsella rubella HOM05D002335 ORTHO05D006692 1.5e-88 329.7 182 80.2
Eucgr.C03501 Eucalyptus grandis HOM05D002335 ORTHO05D006692 1.5e-88 329.7 186 79.6
Prupe.7G199200 Prunus persica HOM05D002335 ORTHO05D006692 1.5e-88 329.7 186 79.6
Thhalv10008863m.g Eutrema salsugineum HOM05D002335 ORTHO05D006692 1.9e-88 329.3 182 80.2
RcHm_v2.0_Chr2g0094901 Rosa chinensis HOM05D002335 ORTHO05D006692 1.9e-88 329.3 186 80.6
AL3G43590 Arabidopsis lyrata HOM05D002335 ORTHO05D006692 2.5e-88 328.9 182 80.8
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 3.2e-88 328.6 178 81.5
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 3.2e-88 328.6 178 81.5
Eucgr.C03511 Eucalyptus grandis HOM05D002335 ORTHO05D006692 3.2e-88 328.6 183 80.3
Sp3g24590 Schrenkiella parvula HOM05D002335 ORTHO05D006692 5.5e-88 327.8 182 79.1
Eucgr.C03340 Eucalyptus grandis HOM05D002335 ORTHO05D006692 7.2e-88 327.4 185 79.5
Eucgr.C03348 Eucalyptus grandis HOM05D002335 ORTHO05D006692 7.2e-88 327.4 185 78.9
Nn6g35620 Nelumbo nucifera HOM05D002335 ORTHO05D006692 7.2e-88 327.4 184 78.8
Gorai.010G088300 Gossypium raimondii HOM05D002335 ORTHO05D006692 1.2e-87 326.6 182 80.8
Sed0014235 Sechium edule HOM05D002335 ORTHO05D006692 1.2e-87 326.6 185 80.0
CARHR103670 Cardamine hirsuta HOM05D002335 ORTHO05D006692 1.6e-87 326.2 178 80.3
Gohir.A06G076400 Gossypium hirsutum HOM05D002335 ORTHO05D006692 2.7e-87 325.5 182 80.8
Sed0016579 Sechium edule HOM05D002335 ORTHO05D006692 4.7e-87 324.7 184 79.9
Hma1.2p1_0169F.1_g074550 Hydrangea macrophylla HOM05D002335 ORTHO05D006692 1.0e-86 323.6 185 81.1
Hma1.2p1_0169F.1_g074601 Hydrangea macrophylla HOM05D002335 ORTHO05D006692 1.0e-86 323.6 185 81.1
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 1.0e-86 323.6 184 81.0
PSO135G0567 Papaver somniferum HOM05D002335 ORTHO05D006692 1.8e-86 322.8 186 81.2
Lalb_Chr12g0200131 Lupinus albus HOM05D002335 ORTHO05D006692 3.0e-86 322.0 187 79.1
MD15G1217300 Malus domestica HOM05D002335 ORTHO05D006692 4.0e-86 321.6 186 78.5
Aa31sc133G40 Aethionema arabicum HOM05D002335 ORTHO05D006692 6.8e-86 320.9 182 77.5
PGR044G0908 Punica granatum HOM05D002335 ORTHO05D006692 6.8e-86 320.9 183 77.6
MSTRG.10511 Avicennia marina HOM05D002335 ORTHO05D006692 1.5e-85 319.7 187 77.5
Dinv25560 Davidia involucrata HOM05D002335 ORTHO05D006692 1.5e-85 319.7 184 79.3
Migut.L01564 Erythranthe guttata HOM05D002335 ORTHO05D006692 2.6e-85 318.9 185 77.8
MD02G1091100 Malus domestica HOM05D002335 ORTHO05D006692 4.4e-85 318.2 186 77.4
SalBow5G0979 Salvia bowleyana HOM05D002335 ORTHO05D006692 5.7e-85 317.8 185 77.3
SalBow5G2105 Salvia bowleyana HOM05D002335 ORTHO05D006692 5.7e-85 317.8 185 77.3
Actinidia29931 Actinidia chinensis HOM05D002335 ORTHO05D006692 9.8e-85 317.0 183 77.6
AUR62025248 Chenopodium quinoa HOM05D002335 ORTHO05D006692 9.8e-85 317.0 184 79.3
AUR62028936 Chenopodium quinoa HOM05D002335 ORTHO05D006692 9.8e-85 317.0 184 79.3
Psat4g017640 Pisum sativum HOM05D002335 ORTHO05D006692 9.8e-85 317.0 185 77.3
Eucgr.H02780 Eucalyptus grandis HOM05D002335 ORTHO05D006692 1.3e-84 316.6 185 75.7
FvH4_1g08630 Fragaria vesca HOM05D002335 ORTHO05D006692 1.3e-84 316.6 185 76.8
FAN28G2258 Fragaria x ananassa HOM05D002335 ORTHO05D006692 2.8e-84 315.5 185 76.8
Oeu049119.1 Olea europaea HOM05D002335 ORTHO05D006692 3.7e-84 315.1 181 79.0
PGR044G2482 Punica granatum HOM05D002335 ORTHO05D006692 3.7e-84 315.1 183 77.0
FAN23G0492 Fragaria x ananassa HOM05D002335 ORTHO05D006692 4.8e-84 314.7 185 76.8
Solyc07g041780.3 Solanum lycopersicum HOM05D002335 ORTHO05D006692 4.8e-84 314.7 175 81.1
CANSAT56G4475 Cannabis sativa HOM05D002335 ORTHO05D006692 6.3e-84 314.3 176 79.5
THA.LOC104826590 Tarenaya hassleriana HOM05D002335 ORTHO05D006692 6.3e-84 314.3 178 77.5
Sc18g0002530 Simmondsia chinensis HOM05D002335 ORTHO05D006692 8.3e-84 313.9 176 79.0
Sopen12g004030 Solanum pennellii HOM05D002335 ORTHO05D006692 8.3e-84 313.9 179 77.7
EL10Ac8g19062 Beta vulgaris HOM05D002335 ORTHO05D006692 1.4e-83 313.2 178 78.7
Cpa.g.sc28.42 Carica papaya HOM05D002335 ORTHO05D006692 1.4e-83 313.2 200 72.5
Peaxi162Scf00127g00206 Petunia axillaris HOM05D002335 ORTHO05D006692 3.1e-83 312.0 175 78.9
Sopen07g021270 Solanum pennellii HOM05D002335 ORTHO05D006692 1.6e-82 309.7 175 80.6
ECA240G4665 Erigeron canadensis HOM05D002335 ORTHO05D006692 2.0e-82 309.3 180 78.9
PGSC0003DMG400013000 Solanum tuberosum HOM05D002335 ORTHO05D006692 3.5e-82 308.5 175 79.4
SGA_v2.0_scaffold308G48074 Striga asiatica HOM05D002335 ORTHO05D006692 3.5e-82 308.5 182 76.4
THA.LOC104815332 Tarenaya hassleriana HOM05D002335 ORTHO05D006692 4.5e-82 308.1 179 78.2
Hund26036 Selenicereus undatus HOM05D002335 ORTHO05D006692 1.7e-81 306.2 182 75.3
PGSC0003DMG400000324 Solanum tuberosum HOM05D002335 ORTHO05D006692 1.1e-80 303.5 199 70.4
FAN19G2961 Fragaria x ananassa HOM05D002335 ORTHO05D006692 1.9e-80 302.8 206 68.4
vmacro17199 Vaccinium macrocarpon HOM05D002335 ORTHO05D006692 3.3e-80 302.0 215 66.5
DCAR_024750 Daucus carota HOM05D002335 ORTHO05D006692 5.5e-80 301.2 184 73.4
DCAR_031919 Daucus carota HOM05D002335 ORTHO05D006692 5.5e-80 301.2 184 73.4
Rhsim05G0007700 Rhododendron simsii HOM05D002335 ORTHO05D006692 1.6e-79 299.7 168 80.4
Eucgr.C03331 Eucalyptus grandis HOM05D002335 ORTHO05D006692 2.1e-79 299.3 164 81.7
Aqoxy7G04078 Aquilegia oxysepala HOM05D002335 ORTHO05D006692 2.8e-79 298.9 178 71.9
MBI13_g42820_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006692 6.8e-78 294.3 183 73.2
CDE05G1851 Ceratophyllum demersum HOM05D002335 ORTHO05D006692 1.2e-77 293.5 184 71.2
FAN26G1566 Fragaria x ananassa HOM05D002335 ORTHO05D006692 2.6e-77 292.4 227 62.1
FAN26G0120 Fragaria x ananassa HOM05D002335 ORTHO05D006692 3.4e-77 292.0 227 61.7
Thecc.09G077400 Theobroma cacao HOM05D002335 ORTHO05D006692 4.9e-76 288.1 158 81.6
HanXRQChr03g0060151 Helianthus annuus HOM05D002335 ORTHO05D006692 2.4e-75 285.8 164 82.3
Cc06_g12140 Coffea canephora HOM05D002335 ORTHO05D006692 4.1e-75 285.0 154 83.1
Sabra06G0111100 Salix brachista HOM05D002335 ORTHO05D006692 4.1e-75 285.0 154 83.1
MBI19_g11823_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006692 5.4e-75 284.6 180 71.1
MBI19_g37791_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006692 5.4e-75 284.6 180 71.1
Zm00001eb081660 Zea mays HOM05D002335 ORTHO05D006692 5.9e-74 281.2 179 69.8
arahy.Tifrunner.gnm1.ann1.0T42SY Arachis hypogaea HOM05D002335 ORTHO05D006692 7.8e-74 280.8 186 70.4
vmacro06340 Vaccinium macrocarpon HOM05D002335 ORTHO05D006692 1.3e-73 280.0 199 66.8
arahy.Tifrunner.gnm1.ann1.U5UTMI Arachis hypogaea HOM05D002335 ORTHO05D006692 5.0e-73 278.1 186 71.0
ATR0598G258 Amborella trichopoda HOM05D002335 ORTHO05D006692 3.3e-72 275.4 184 66.8
Dinv42391 Davidia involucrata HOM05D002335 ORTHO05D006692 1.6e-71 273.1 183 72.1
CDE11G0744 Ceratophyllum demersum HOM05D002335 ORTHO05D006692 1.8e-70 269.6 207 61.4
Ca_21321_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006692 1.2e-69 266.9 155 76.1
Atru.chr7.1701 Acer truncatum HOM05D002335 ORTHO05D006692 1.7e-68 263.1 151 77.5
Solyc12g009080.2 Solanum lycopersicum HOM05D002335 ORTHO05D006692 3.7e-68 261.9 151 74.8
CAN.G1963.2 Capsicum annuum HOM05D002335 ORTHO05D006692 8.3e-68 260.8 149 74.5
Rhsim03G0227700 Rhododendron simsii HOM05D002335 ORTHO05D006692 5.4e-67 258.1 281 49.5
TPR.G12576 Trifolium pratense HOM05D002335 ORTHO05D006692 2.0e-66 256.1 148 75.0
unitig_8.g3530 Utricularia gibba HOM05D002335 ORTHO05D006692 5.0e-65 251.5 184 62.5
Nitab4.5_0000073g0180 Nicotiana tabacum HOM05D002335 ORTHO05D006692 8.6e-65 250.8 146 76.0
Medtr4g125360 Medicago truncatula HOM05D002335 ORTHO05D006692 3.3e-64 248.8 140 77.1
Peaxi162Scf00928g00035 Petunia axillaris HOM05D002335 ORTHO05D006692 2.6e-61 239.2 170 66.5
HPP92_013380 Vanilla planifolia HOM05D002335 ORTHO05D006692 2.3e-57 226.1 178 57.9
Eucgr.C03278 Eucalyptus grandis HOM05D002335 ORTHO05D006692 1.5e-56 223.4 120 81.7
Mapoly0146s0032 Marchantia polymorpha HOM05D002335 ORTHO05D006692 2.8e-55 219.2 180 55.0
unitig_899.g15177 Utricularia gibba HOM05D002335 ORTHO05D006692 3.6e-55 218.8 182 56.6
Lj7A687T54 Lonicera japonica HOM05D002335 ORTHO05D006692 6.8e-54 214.5 194 58.8
Gohir.D06G075400 Gossypium hirsutum HOM05D002335 ORTHO05D006692 7.5e-53 211.1 182 58.2
SMO361G0221 Selaginella moellendorffii HOM05D002335 ORTHO05D006692 5.2e-46 188.3 173 46.2
SMO361G0519 Selaginella moellendorffii HOM05D002335 ORTHO05D006692 5.2e-46 188.3 173 46.2
Ah.09g231610 Amaranthus hybridus HOM05D002335 ORTHO05D006692 6.8e-46 188.0 199 50.8
Nitab4.5_0011754g0020 Nicotiana tabacum HOM05D002335 ORTHO05D006692 1.7e-44 183.3 184 55.4
SEGI_04946 Sequoiadendron giganteum HOM05D002335 ORTHO05D006692 3.8e-44 182.2 121 66.9
AagrBONN_evm.TU.Sc2ySwM_368.225 Anthoceros agrestis HOM05D002335 ORTHO05D006692 3.2e-43 179.1 202 43.6
Eucgr.L03294 Eucalyptus grandis HOM05D002335 ORTHO05D006692 3.2e-43 179.1 143 60.8
Nitab4.5_0002966g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006692 1.0e-41 174.1 91 84.6
Eucgr.C03281 Eucalyptus grandis HOM05D002335 ORTHO05D006692 6.6e-41 171.4 90 83.3
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 1.1e-40 170.6 162 50.0
Pp3c2_1630 Physcomitrium patens HOM05D002335 ORTHO05D006692 9.6e-40 167.5 178 42.1
AagrBONN_evm.TU.Sc2ySwM_368.521 Anthoceros agrestis HOM05D002335 ORTHO05D006692 4.7e-39 165.2 205 38.5
Pp3c14_25980 Physcomitrium patens HOM05D002335 ORTHO05D006692 6.9e-38 161.4 180 40.0
HPP92_013382 Vanilla planifolia HOM05D002335 ORTHO05D006692 6.4e-36 154.8 93 69.9
Eucgr.C03513 Eucalyptus grandis HOM05D002335 ORTHO05D006692 8.4e-36 154.5 149 52.3
CBR_g38469 Chara braunii HOM05D002335 ORTHO05D006692 3.5e-34 149.1 166 41.6
Os04g0446200 Oryza sativa ssp. japonica HOM05D002335 ORTHO05D006692 2.9e-28 129.4 90 63.3
Thecc.09G077100 Theobroma cacao HOM05D001119 ORTHO05D000862 3.5e-10 69.3 74 48.6
vmacro17200 Vaccinium macrocarpon HOM05D001119 ORTHO05D000862 1.3e-09 67.4 46 60.9
Nn6g32302 Nelumbo nucifera HOM05D002335 ORTHO05D006692 1.1e-06 57.8 43 65.1
Medtr4g125350 Medicago truncatula HOM05D001119 ORTHO05D000862 5.3e-06 55.5 35 80.0


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