Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G122600 Carya illinoinensis HOM05D004838 ORTHO05D005373 1.1e-47 193.0 94 100.0
CiPaw.03G169600 Carya illinoinensis HOM05D004838 ORTHO05D005373 6.4e-37 157.1 94 83.0
Cfa014541 Carpinus fangiana HOM05D004838 ORTHO05D005373 3.0e-34 148.3 94 75.5
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 3.3e-33 144.8 94 72.3
Haze_13080 Corylus avellana HOM05D004838 ORTHO05D005373 2.7e-27 125.2 86 70.9
CSS0009105 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.9e-25 119.0 97 58.8
Hma1.2p1_0565F.1_g179630 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 1.9e-25 119.0 101 57.4
SalBow7G0296 Salvia bowleyana HOM05D004838 ORTHO05D005373 1.9e-25 119.0 92 58.7
Nitab4.5_0002791g0020 Nicotiana tabacum HOM05D004838 ORTHO05D005373 4.3e-25 117.9 93 58.1
Glyma.12G201000 Glycine max HOM05D004838 ORTHO05D005373 5.6e-25 117.5 95 62.1
Atru.chr6.3079 Acer truncatum HOM05D004838 ORTHO05D005373 7.4e-25 117.1 94 63.8
Lsat_1_v5_gn_3_40041 Lactuca sativa HOM05D004838 ORTHO05D005373 9.6e-25 116.7 91 61.5
Glyma.13G301200 Glycine max HOM05D004838 ORTHO05D005373 3.7e-24 114.8 95 61.1
Nitab4.5_0010094g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 3.7e-24 114.8 93 57.0
MELO3C018765.2 Cucumis melo HOM05D004838 ORTHO05D005373 4.8e-24 114.4 94 62.8
Dinv13826 Davidia involucrata HOM05D004838 ORTHO05D005373 4.8e-24 114.4 89 62.9
ClCG02G001310 Citrullus lanatus HOM05D004838 ORTHO05D005373 6.2e-24 114.0 94 62.8
CsaV3_7G004130 Cucumis sativus L. HOM05D004838 ORTHO05D005373 6.2e-24 114.0 93 62.4
MD17G1084900 Malus domestica HOM05D004838 ORTHO05D005373 6.2e-24 114.0 95 62.1
Migut.M00337 Erythranthe guttata HOM05D004838 ORTHO05D005373 1.1e-23 113.2 93 55.9
Phvul.005G107800 Phaseolus vulgaris HOM05D004838 ORTHO05D005373 1.8e-23 112.5 95 61.1
Cc05_g06190 Coffea canephora HOM05D004838 ORTHO05D005373 2.4e-23 112.1 94 53.2
Prupe.3G230300 Prunus persica HOM05D004838 ORTHO05D005373 4.0e-23 111.3 94 62.8
QL08p037147 Quercus lobata HOM05D004838 ORTHO05D005373 4.0e-23 111.3 86 66.3
Eucgr.K00912 Eucalyptus grandis HOM05D004838 ORTHO05D005373 5.3e-23 110.9 93 57.0
Thecc.02G171400 Theobroma cacao HOM05D004838 ORTHO05D005373 1.2e-22 109.8 95 60.0
PGSC0003DMG400018373 Solanum tuberosum HOM05D004838 ORTHO05D005373 1.5e-22 109.4 94 54.3
Actinidia09904 Actinidia chinensis HOM05D004838 ORTHO05D005373 3.4e-22 108.2 90 58.9
Lsat_1_v5_gn_3_40080 Lactuca sativa HOM05D004838 ORTHO05D005373 3.4e-22 108.2 93 55.9
Sed0001014 Sechium edule HOM05D004838 ORTHO05D005373 3.4e-22 108.2 94 61.7
TWI36G0547 Tripterygium wilfordii HOM05D004838 ORTHO05D005373 5.8e-22 107.5 91 58.2
Solyc07g054730.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 7.6e-22 107.1 94 52.1
Sopen07g028660 Solanum pennellii HOM05D004838 ORTHO05D005373 7.6e-22 107.1 94 52.1
Manes.12G082700 Manihot esculenta HOM05D004838 ORTHO05D005373 1.3e-21 106.3 94 60.6
Ca_01537_v3 Cicer arietinum L. HOM05D004838 ORTHO05D005373 2.2e-21 105.5 91 57.1
COL.COLO4_13681 Corchorus olitorius HOM05D004838 ORTHO05D005373 2.9e-21 105.1 95 57.9
Hma1.2p1_0662F.1_g198280 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 2.9e-21 105.1 94 57.4
Lalb_Chr14g0366611 Lupinus albus HOM05D004838 ORTHO05D005373 6.5e-21 104.0 94 53.2
Manes.13G151900 Manihot esculenta HOM05D004838 ORTHO05D005373 6.5e-21 104.0 94 57.4
Migut.H01017 Erythranthe guttata HOM05D004838 ORTHO05D005373 8.4e-21 103.6 94 54.3
CSS0036889 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.1e-20 103.2 94 55.3
Medtr2g090020 Medicago truncatula HOM05D004838 ORTHO05D005373 1.4e-20 102.8 94 54.3
ECA246G4438 Erigeron canadensis HOM05D004838 ORTHO05D005373 1.9e-20 102.4 91 53.8
Sed0027638 Sechium edule HOM05D004838 ORTHO05D005373 1.9e-20 102.4 94 58.5
CSS0025457 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 7.1e-20 100.5 95 56.8
Ciclev10017352m.g Citrus clementina HOM05D004838 ORTHO05D005373 7.1e-20 100.5 91 58.2
Nn1g03874 Nelumbo nucifera HOM05D004838 ORTHO05D005373 9.3e-20 100.1 92 56.5
MD09G1096600 Malus domestica HOM05D004838 ORTHO05D005373 1.2e-19 99.8 87 63.2
Lsat_1_v5_gn_4_68580 Lactuca sativa HOM05D004838 ORTHO05D005373 2.1e-19 99.0 92 52.2
Rhsim06G0152400 Rhododendron simsii HOM05D004838 ORTHO05D005373 6.0e-19 97.4 92 55.4
SGA_v2.0_scaffold70G23461 Striga asiatica HOM05D004838 ORTHO05D005373 6.0e-19 97.4 93 51.6
CSS0009600 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.0e-18 96.7 97 51.5
CSS0031952 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.0e-18 96.7 95 52.6
Psat5g269520 Pisum sativum HOM05D004838 ORTHO05D005373 1.8e-18 95.9 94 51.1
TAR629G1266 Trochodendron aralioides HOM05D004838 ORTHO05D005373 1.8e-18 95.9 91 52.7
Psat5g269720 Pisum sativum HOM05D004838 ORTHO05D005373 2.3e-18 95.5 91 51.6
Cpa.g.sc34.87 Carica papaya HOM05D004838 ORTHO05D005373 3.0e-18 95.1 97 57.7
Gohir.A01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 3.0e-18 95.1 95 56.8
CSS0040113 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 3.9e-18 94.7 98 50.0
MBI02_g13229_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 3.9e-18 94.7 91 46.2
Psat5g269560 Pisum sativum HOM05D004838 ORTHO05D005373 3.9e-18 94.7 94 51.1
Potri.019G116300 Populus trichocarpa HOM05D004838 ORTHO05D005373 1.1e-17 93.2 94 54.3
Gorai.002G017000 Gossypium raimondii HOM05D004838 ORTHO05D005373 1.9e-17 92.4 95 55.8
Gohir.D01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 2.5e-17 92.0 95 54.7
Lj3g0009480 Lotus japonicus HOM05D004838 ORTHO05D005373 2.5e-17 92.0 95 49.5
Psat5g269640 Pisum sativum HOM05D004838 ORTHO05D005373 5.7e-17 90.9 95 50.5
Rhsim04G0062900 Rhododendron simsii HOM05D000831 ORTHO05D005373 5.7e-17 90.9 84 54.8
DCAR_012975 Daucus carota HOM05D004838 ORTHO05D005373 9.7e-17 90.1 95 48.4
Medtr2g090010 Medicago truncatula HOM05D004838 ORTHO05D005373 9.7e-17 90.1 94 48.9
Lsat_1_v5_gn_3_40341 Lactuca sativa HOM05D004838 ORTHO05D005373 1.6e-16 89.4 93 53.8
TPR.G27093 Trifolium pratense HOM05D004838 ORTHO05D005373 2.8e-16 88.6 90 52.2
Sabra19G0117300 Salix brachista HOM05D004838 ORTHO05D005373 6.3e-16 87.4 94 50.0
Sabra19G0136400 Salix brachista HOM05D004838 ORTHO05D005373 6.3e-16 87.4 94 50.0
Nn1g06781 Nelumbo nucifera HOM05D004838 ORTHO05D005373 8.2e-16 87.0 90 51.1
RcHm_v2.0_Chr2g0161551 Rosa chinensis HOM05D004838 ORTHO05D005373 1.8e-15 85.9 94 51.1
Lsat_1_v5_gn_3_40321 Lactuca sativa HOM05D004838 ORTHO05D005373 4.1e-15 84.7 93 51.6
Potri.013G147700 Populus trichocarpa HOM05D004838 ORTHO05D005373 1.5e-14 82.8 95 54.7
Medtr2g090015 Medicago truncatula HOM05D004838 ORTHO05D005373 4.5e-14 81.3 94 43.6
Migut.H01016 Erythranthe guttata HOM05D004838 ORTHO05D005373 5.9e-14 80.9 97 49.5
Lsat_1_v5_gn_3_40461 Lactuca sativa HOM05D004838 ORTHO05D005373 5.9e-14 80.9 92 51.1
Migut.H01015 Erythranthe guttata HOM05D004838 ORTHO05D005373 1.0e-13 80.1 95 48.4
Lsat_1_v5_gn_3_40141 Lactuca sativa HOM05D004838 ORTHO05D005373 1.7e-13 79.3 92 44.6
TAR627G0102 Trochodendron aralioides HOM05D004838 ORTHO05D005373 1.7e-13 79.3 76 53.9
Sc21g0002530 Simmondsia chinensis HOM05D004838 ORTHO05D005373 2.2e-13 79.0 90 52.2
FAN02G3359 Fragaria x ananassa HOM05D004838 ORTHO05D005373 2.9e-13 78.6 95 52.6
AL7G24360 Arabidopsis lyrata HOM05D004838 ORTHO05D005373 3.8e-13 78.2 98 50.0
AT4G28240 Arabidopsis thaliana HOM05D004838 ORTHO05D005373 3.8e-13 78.2 98 50.0
Carub.0007s1252 Capsella rubella HOM05D004838 ORTHO05D005373 8.5e-13 77.0 99 49.5
Sp7g26200 Schrenkiella parvula HOM05D004838 ORTHO05D005373 1.1e-12 76.6 94 46.8
FAN05G2643 Fragaria x ananassa HOM05D004838 ORTHO05D005373 1.4e-12 76.3 95 51.6
BcaC07g38318 Brassica carinata HOM05D004838 ORTHO05D005373 3.2e-12 75.1 94 44.7
BolC8t48742H Brassica oleracea HOM05D004838 ORTHO05D005373 3.2e-12 75.1 94 44.7
CARHR235950 Cardamine hirsuta HOM05D004838 ORTHO05D005373 3.2e-12 75.1 94 45.7
ECA246G0551 Erigeron canadensis HOM05D004838 ORTHO05D005373 3.2e-12 75.1 85 48.2
Thhalv10026689m.g Eutrema salsugineum HOM05D004838 ORTHO05D005373 4.2e-12 74.7 98 48.0
Sc21g0002490 Simmondsia chinensis HOM05D004838 ORTHO05D005373 4.2e-12 74.7 90 47.8
Actinidia08019 Actinidia chinensis HOM05D004838 ORTHO05D005373 5.5e-12 74.3 94 45.7
Sabra13G0119300 Salix brachista HOM05D004838 ORTHO05D005373 9.4e-12 73.6 89 52.8
THA.LOC104804066 Tarenaya hassleriana HOM05D004838 ORTHO05D005373 9.4e-12 73.6 94 43.6
Nn2g11248 Nelumbo nucifera HOM05D004838 ORTHO05D005373 1.2e-11 73.2 90 47.8
BcaB03g12560 Brassica carinata HOM05D004838 ORTHO05D005373 2.7e-11 72.0 98 43.9
Sc21g0002480 Simmondsia chinensis HOM05D004838 ORTHO05D005373 4.6e-11 71.2 90 45.6
A08p20180 Brassica napus HOM05D004838 ORTHO05D005373 6.1e-11 70.9 94 42.6
C07p56050 Brassica napus HOM05D004838 ORTHO05D005373 6.1e-11 70.9 99 44.4
BolC7t46082H Brassica oleracea HOM05D004838 ORTHO05D005373 6.1e-11 70.9 99 44.4
BraA08t33978Z Brassica rapa HOM05D004838 ORTHO05D005373 6.1e-11 70.9 94 42.6
CDE02G2086 Ceratophyllum demersum HOM05D001554 ORTHO05D001481 6.1e-11 70.9 91 41.8
BcaNung01586 Brassica carinata HOM05D004838 ORTHO05D005373 7.9e-11 70.5 98 42.9
CDE10G0022 Ceratophyllum demersum HOM05D004838 ORTHO05D005373 1.4e-10 69.7 88 45.5
ECA246G2857 Erigeron canadensis HOM05D004838 ORTHO05D005373 1.4e-10 69.7 91 45.1
BcaC09g50503 Brassica carinata HOM05D004838 ORTHO05D005373 8.8e-10 67.0 98 41.8
A01p19650 Brassica napus HOM05D004838 ORTHO05D005373 8.8e-10 67.0 98 41.8
C01p24680 Brassica napus HOM05D004838 ORTHO05D005373 8.8e-10 67.0 98 41.8
BolC1t02417H Brassica oleracea HOM05D004838 ORTHO05D005373 8.8e-10 67.0 98 41.8
BraA01t01898Z Brassica rapa HOM05D004838 ORTHO05D005373 8.8e-10 67.0 98 41.8
ATR0852G001 Amborella trichopoda HOM05D004838 ORTHO05D005373 2.0e-09 65.9 96 44.8
Lsat_1_v5_gn_3_40361 Lactuca sativa HOM05D004838 ORTHO05D005373 2.0e-09 65.9 89 43.8
A03p57930 Brassica napus HOM05D004838 ORTHO05D005373 2.5e-09 65.5 101 41.6
Sed0022545 Sechium edule HOM05D004838 ORTHO05D005373 2.5e-09 65.5 96 47.9
Lalb_Chr22g0356341 Lupinus albus HOM05D004838 ORTHO05D005373 3.3e-09 65.1 94 36.2
MBI18_g19832_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 3.3e-09 65.1 91 41.8
ECA246G1879 Erigeron canadensis HOM05D000214 ORTHO05D000131 4.3e-09 64.7 83 45.8
Nitab4.5_0005244g0070 Nicotiana tabacum HOM05D004838 ORTHO05D005373 4.3e-09 64.7 86 43.0
Nitab4.5_0011184g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 4.3e-09 64.7 89 44.9
Thecc.06G200800 Theobroma cacao HOM05D004838 ORTHO05D005373 4.3e-09 64.7 90 41.1
BraA03t14857Z Brassica rapa HOM05D004838 ORTHO05D005373 9.7e-09 63.5 103 40.8
MBI18_g27682_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 9.7e-09 63.5 91 40.7
unitig_699.g19386 Utricularia gibba HOM05D004838 ORTHO05D005373 1.3e-08 63.2 97 46.4
Sc21g0002500 Simmondsia chinensis HOM05D004838 ORTHO05D005373 2.2e-08 62.4 88 43.2
ClCG02G017310 Citrullus lanatus HOM05D031423 ORTHO05D005373 2.8e-08 62.0 89 40.4
ECA246G0483 Erigeron canadensis HOM05D004838 ORTHO05D005373 2.8e-08 62.0 86 40.7
Sc21g0002520 Simmondsia chinensis HOM05D004838 ORTHO05D005373 3.7e-08 61.6 88 43.2
Solyc12g005600.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 4.8e-08 61.2 91 39.6
MELO3C013538.2 Cucumis melo HOM05D031423 ORTHO05D034979 6.3e-08 60.8 101 43.6
FvH4_6g44490 Fragaria vesca HOM05D003712 ORTHO05D004368 6.3e-08 60.8 86 50.0
Lsat_1_v5_gn_3_40020 Lactuca sativa HOM05D004838 ORTHO05D005373 6.3e-08 60.8 74 44.6
Sc21g0002510 Simmondsia chinensis HOM05D004838 ORTHO05D005373 1.1e-07 60.1 88 43.2
unitig_27.g24815 Utricularia gibba HOM05D004838 ORTHO05D005373 1.1e-07 60.1 95 40.0
Gohir.D05G169000 Gossypium hirsutum HOM05D004838 ORTHO05D005373 1.4e-07 59.7 90 36.7
QL05p081093 Quercus lobata HOM05D004838 ORTHO05D005373 1.8e-07 59.3 90 37.8
Gohir.A05G166000 Gossypium hirsutum HOM05D004838 ORTHO05D005373 5.3e-07 57.8 90 36.7
Haze_06585 Corylus avellana HOM05D004838 ORTHO05D005373 9.1e-07 57.0 97 38.1
Gorai.009G174200 Gossypium raimondii HOM05D004838 ORTHO05D005373 9.1e-07 57.0 90 35.6
ECA246G1803 Erigeron canadensis HOM05D004838 ORTHO05D005373 1.5e-06 56.2 91 38.5
Haze_09397 Corylus avellana HOM05D004838 ORTHO05D005373 2.0e-06 55.8 46 56.5
Potri.011G042000 Populus trichocarpa HOM05D038532 ORTHO05D005373 3.4e-06 55.1 93 34.4
Thecc.02G170800 Theobroma cacao HOM05D000831 ORTHO05D000660 4.5e-06 54.7 92 34.8
HPP92_001805 Vanilla planifolia HOM05D004838 ORTHO05D005373 4.5e-06 54.7 92 37.0
Glyma.06G298400 Glycine max HOM05D004838 ORTHO05D005373 7.7e-06 53.9 94 37.2


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