Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G101700 Carya illinoinensis HOM05D011587 ORTHO05D010602 4.4e-89 331.3 165 100.0
CiPaw.04G102100 Carya illinoinensis HOM05D011587 ORTHO05D010602 2.5e-52 209.1 147 75.5
MBI05_g34728_MAGBIO Magnolia biondii HOM05D011587 ORTHO05D010602 4.0e-34 148.7 148 55.4
Os02g0578201 Oryza sativa ssp. japonica HOM05D011587 ORTHO05D010602 3.5e-30 135.6 149 51.7
CiPaw.05G034500 Carya illinoinensis HOM05D011587 ORTHO05D010602 1.9e-28 129.8 140 55.0
CiPaw.10G145000 Carya illinoinensis HOM05D011587 ORTHO05D010602 9.0e-26 120.9 141 52.5
FAN21G3253 Fragaria x ananassa HOM05D011587 ORTHO05D010602 2.1e-22 109.8 100 55.0
MBI02_g27281_MAGBIO Magnolia biondii HOM05D000027 ORTHO05D000066 6.9e-18 94.7 93 54.8
Eucgr.H04761 Eucalyptus grandis HOM05D011587 ORTHO05D010602 2.0e-17 93.2 78 60.3
Zm00001eb244580 Zea mays HOM05D011587 ORTHO05D010602 4.5e-17 92.0 139 41.7
MBI05_g29016_MAGBIO Magnolia biondii HOM05D011587 ORTHO05D010602 6.4e-16 88.2 73 63.0
MBI05_g29014_MAGBIO Magnolia biondii HOM05D011587 ORTHO05D010602 2.7e-14 82.8 66 66.7
FAN14G0237 Fragaria x ananassa HOM05D011587 ORTHO05D010602 1.1e-12 77.4 82 50.0
FAN14G5886 Fragaria x ananassa HOM05D010444 ORTHO05D010602 1.1e-12 77.4 117 41.0
SGA_v2.0_scaffold181G39744 Striga asiatica HOM05D010444 ORTHO05D010602 1.1e-12 77.4 154 35.7
Zm00001eb353630 Zea mays HOM05D010444 ORTHO05D010602 1.8e-10 70.1 144 37.5
MBI07_g02631_MAGBIO Magnolia biondii HOM05D011891 ORTHO05D014146 4.0e-10 68.9 125 41.6
Os01g0735450 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 5.3e-10 68.6 99 41.4
MBI15_g27554_MAGBIO Magnolia biondii HOM05D010444 ORTHO05D010602 3.4e-09 65.9 166 36.1
MBI07_g06919_MAGBIO Magnolia biondii HOM05D011891 ORTHO05D014146 1.7e-08 63.5 125 40.0
SGA_v2.0_scaffold127G34043 Striga asiatica HOM05D011891 ORTHO05D014146 3.8e-08 62.4 115 37.4
Os09g0518266 Oryza sativa ssp. japonica HOM05D011891 ORTHO05D014146 6.5e-08 61.6 153 33.3
MD09G1143100 Malus domestica HOM05D011587 ORTHO05D010602 8.4e-08 61.2 53 64.2
Lsat_1_v5_gn_1_25761 Lactuca sativa HOM05D002874 ORTHO05D003250 1.4e-07 60.5 103 39.8
MBI15_g22229_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 2.5e-07 59.7 60 50.0
Zm00001eb117540 Zea mays HOM05D010444 ORTHO05D010602 2.5e-07 59.7 161 31.7
Zm00001eb323950 Zea mays HOM05D010444 ORTHO05D010602 2.5e-07 59.7 152 33.6
SGA_v2.0_scaffold12G06190 Striga asiatica HOM05D011891 ORTHO05D014146 1.2e-06 57.4 159 34.6
Os07g0503200 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 2.7e-06 56.2 65 46.2
A01p33230 Brassica napus HOM05D010444 ORTHO05D010602 6.0e-06 55.1 61 47.5
MBI15_g22231_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 6.0e-06 55.1 123 35.8
Manes.04G106150 Manihot esculenta HOM05D011587 ORTHO05D010602 6.0e-06 55.1 82 51.2


User provided reference genes

Program Settings