Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 1.2e-80 303.1 156 100.0
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 5.1e-71 271.2 156 88.5
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 3.1e-68 261.9 156 85.3
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 3.4e-67 258.5 156 85.9
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 1.3e-66 256.5 156 84.6
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 2.2e-66 255.8 154 84.4
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 3.8e-66 255.0 156 84.0
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 5.4e-65 251.1 156 84.0
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 5.4e-65 251.1 156 84.0
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 4.6e-64 248.1 156 81.4
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 4.6e-64 248.1 156 83.3
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 1.0e-63 246.9 156 82.1
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 5.1e-63 244.6 150 84.0
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 5.1e-63 244.6 156 80.8
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 8.7e-63 243.8 156 79.5
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 1.5e-62 243.0 150 85.3
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 4.3e-62 241.5 156 84.6
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 4.3e-62 241.5 156 77.6
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 9.6e-62 240.4 156 80.8
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 9.6e-62 240.4 156 79.5
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 1.3e-61 240.0 150 84.0
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.1e-61 239.2 156 80.1
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.1e-61 239.2 156 80.1
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 2.1e-61 239.2 156 80.8
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 2.8e-61 238.8 141 87.2
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 3.6e-61 238.4 157 79.6
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 3.6e-61 238.4 156 78.8
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 4.8e-61 238.0 140 87.9
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 6.2e-61 237.7 156 80.8
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 1.8e-60 236.1 156 83.3
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 3.1e-60 235.3 158 77.8
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 5.3e-60 234.6 156 82.7
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.2e-59 233.4 156 78.8
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.5e-59 233.0 157 77.1
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 2.6e-59 232.3 156 82.1
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 4.5e-59 231.5 156 75.0
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 5.8e-59 231.1 156 79.5
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 5.8e-59 231.1 155 78.7
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 2.2e-58 229.2 156 75.0
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 2.9e-58 228.8 151 80.1
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 2.9e-58 228.8 156 76.9
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 3.8e-58 228.4 159 76.7
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 3.8e-58 228.4 156 80.1
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 6.4e-58 227.6 122 94.3
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 6.4e-58 227.6 157 75.8
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 1.1e-57 226.9 156 73.7
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 1.4e-57 226.5 156 79.5
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 2.4e-57 225.7 148 81.1
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 3.2e-57 225.3 151 79.5
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 3.2e-57 225.3 130 87.7
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 3.2e-57 225.3 157 75.2
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 4.2e-57 224.9 157 76.4
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 5.4e-57 224.6 157 77.1
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 5.4e-57 224.6 156 78.2
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 9.3e-57 223.8 157 75.8
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 1.6e-56 223.0 156 73.1
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 2.1e-56 222.6 156 76.9
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 2.7e-56 222.2 156 75.0
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 7.9e-56 220.7 156 72.4
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 1.3e-55 219.9 136 79.4
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 1.8e-55 219.5 160 73.1
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 2.3e-55 219.2 130 87.7
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 3.0e-55 218.8 156 73.1
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 3.9e-55 218.4 156 74.4
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 5.1e-55 218.0 127 87.4
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 8.7e-55 217.2 124 88.7
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 8.7e-55 217.2 156 73.7
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.5e-54 216.5 119 92.4
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 5.6e-54 214.5 135 80.7
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 9.6e-54 213.8 161 72.7
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 6.2e-53 211.1 136 80.1
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 8.1e-53 210.7 157 72.6
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 2.4e-52 209.1 158 73.4
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 2.4e-52 209.1 160 71.9
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 3.1e-52 208.8 146 74.7
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 5.3e-52 208.0 160 71.2
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 5.3e-52 208.0 158 72.8
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 5.3e-52 208.0 133 82.0
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 6.9e-52 207.6 158 72.8
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 9.0e-52 207.2 156 73.1
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 1.2e-51 206.8 155 71.6
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 1.5e-51 206.5 158 72.8
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 4.5e-51 204.9 160 71.2
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 4.5e-51 204.9 159 70.4
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 5.8e-51 204.5 157 70.7
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 5.8e-51 204.5 157 70.7
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 9.9e-51 203.8 120 87.5
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 2.2e-50 202.6 158 70.9
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 3.8e-50 201.8 162 70.4
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 8.4e-50 200.7 114 91.2
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 1.6e-48 196.4 125 78.4
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 8.2e-45 184.1 127 74.8
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 6.9e-44 181.0 127 77.2
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.5e-43 179.9 112 83.9
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 2.0e-43 179.5 143 69.2
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 2.6e-43 179.1 122 74.6
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 5.8e-43 177.9 128 73.4
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 3.5e-40 168.7 156 59.6
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 1.0e-39 167.2 129 68.2
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 3.0e-39 165.6 128 66.4
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 8.7e-39 164.1 121 71.1
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 1.1e-38 163.7 128 64.1
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.5e-38 162.5 141 62.4
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 7.4e-38 161.0 107 78.5
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 1.8e-36 156.4 148 59.5
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 1.8e-36 156.4 104 73.1
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 9.0e-36 154.1 141 58.2
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.4e-33 146.7 88 83.0
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 3.0e-15 85.9 64 73.4
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 3.7e-13 79.0 68 55.9
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 1.2e-11 73.9 110 41.8
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 6.7e-07 58.2 107 37.4


User provided reference genes

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