Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 5.1e-66 254.2 124 100.0
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 1.8e-39 166.0 124 66.1
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 3.9e-34 148.3 124 58.9
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.4e-31 139.8 125 55.2
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.8e-31 139.4 125 54.4
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.8e-31 139.4 125 54.4
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 3.5e-30 135.2 128 53.1
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 5.9e-30 134.4 124 52.4
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 1.7e-29 132.9 106 63.2
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 3.8e-29 131.7 126 53.2
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 5.0e-29 131.3 133 48.1
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 1.5e-28 129.8 124 53.2
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 5.5e-28 127.9 124 52.4
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.7e-27 125.6 124 49.2
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 6.1e-27 124.4 124 48.4
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.4e-26 123.2 124 50.8
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 5.2e-26 121.3 124 49.2
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 6.7e-26 120.9 127 52.0
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 7.5e-25 117.5 109 53.2
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 1.7e-24 116.3 124 48.4
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 2.8e-24 115.5 129 47.3
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 3.7e-24 115.2 123 52.0
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 3.7e-24 115.2 129 50.4
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 4.8e-24 114.8 130 49.2
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 8.2e-24 114.0 96 54.2
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.1e-23 113.6 123 51.2
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 2.4e-23 112.5 129 46.5
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 3.1e-23 112.1 123 46.3
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 5.3e-23 111.3 124 46.8
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 7.0e-23 110.9 124 46.8
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 7.0e-23 110.9 124 46.8
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 9.1e-23 110.5 103 55.3
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 1.6e-22 109.8 127 47.2
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 3.5e-22 108.6 101 51.5
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 4.5e-22 108.2 101 52.5
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 7.7e-22 107.5 130 43.1
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 1.0e-21 107.1 121 44.6
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 1.3e-21 106.7 128 43.8
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.7e-21 106.3 125 48.0
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 1.7e-21 106.3 124 46.8
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 2.2e-21 105.9 127 44.9
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 3.8e-21 105.1 120 45.8
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 3.8e-21 105.1 120 40.0
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 1.5e-20 103.2 119 47.1
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.9e-20 102.8 129 45.0
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 4.2e-20 101.7 129 44.2
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 4.2e-20 101.7 116 44.0
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 4.2e-20 101.7 120 43.3
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 7.2e-20 100.9 97 48.5
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 2.1e-19 99.4 133 42.9
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 4.7e-19 98.2 115 47.8
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 8.0e-19 97.4 126 42.9
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 1.0e-18 97.1 104 48.1
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 1.0e-18 97.1 123 41.5
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.8e-18 96.3 129 41.9
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 1.8e-18 96.3 124 42.7
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 4.0e-18 95.1 101 48.5
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 8.8e-18 94.0 128 43.8
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 1.2e-17 93.6 108 51.9
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 1.2e-17 93.6 108 51.9
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 2.6e-17 92.4 122 39.3
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 4.4e-17 91.7 123 39.8
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 5.7e-17 91.3 102 54.9
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 2.2e-16 89.4 95 44.2
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 2.2e-16 89.4 95 44.2
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 2.8e-16 89.0 96 45.8
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 2.8e-16 89.0 96 45.8
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 4.8e-16 88.2 126 41.3
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 6.3e-16 87.8 49 73.5
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 1.1e-15 87.0 102 44.1
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.4e-15 85.9 119 42.0
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 5.4e-15 84.7 109 47.7
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 2.7e-14 82.4 101 42.6
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 2.7e-14 82.4 97 47.4
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 3.8e-13 78.6 94 45.7
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 5.0e-13 78.2 120 40.0
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.1e-12 77.0 104 42.3
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 1.1e-12 77.0 124 36.3
Solyc04g007585.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 1.1e-12 77.0 111 41.4
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.5e-12 76.6 105 41.9
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 4.2e-12 75.1 121 38.8
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 4.2e-12 75.1 94 41.5
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 5.5e-12 74.7 83 49.4
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 5.5e-12 74.7 93 40.9
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 7.2e-12 74.3 97 36.1
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 9.4e-12 73.9 112 37.5
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 1.2e-11 73.6 98 40.8
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.1e-11 72.8 113 39.8
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 1.8e-10 69.7 118 32.2
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 2.3e-10 69.3 94 36.2
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 4.0e-10 68.6 51 58.8
HanXRQChr11g0325281 Helianthus annuus HOM05D007637 ORTHO05D009508 5.7e-09 64.7 124 33.1
PGSC0003DMG400010395 Solanum tuberosum HOM05D007637 ORTHO05D009508 1.7e-08 63.2 114 38.6
Glyma.10G112600 Glycine max HOM05D007637 ORTHO05D009508 4.9e-08 61.6 64 48.4
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 3.1e-07 58.9 68 41.2
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 4.1e-07 58.5 91 36.3
arahy.Tifrunner.gnm1.ann1.NE5PRN Arachis hypogaea HOM05D026189 ORTHO05D009508 7.0e-07 57.8 97 35.1
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 1.6e-06 56.6 81 35.8
arahy.Tifrunner.gnm1.ann1.4UH4YI Arachis hypogaea HOM05D026189 ORTHO05D009508 2.0e-06 56.2 102 33.3
arahy.Tifrunner.gnm1.ann1.K3RR71 Arachis hypogaea HOM05D026189 ORTHO05D009508 4.5e-06 55.1 97 34.0


User provided reference genes

Program Settings