Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G038600 Carya illinoinensis HOM05D007908 ORTHO05D009653 2.6e-52 208.4 102 100.0
CiPaw.03G001800 Carya illinoinensis HOM05D007908 ORTHO05D009653 1.8e-37 159.1 101 79.2
TWI18G0422 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 4.8e-30 134.4 101 59.4
TWI15G0389 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 1.1e-29 133.3 101 59.4
TWI73G0060 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 1.1e-29 133.3 101 59.4
TWI77G1008 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 9.1e-29 130.2 101 57.4
CiPaw.01G307800 Carya illinoinensis HOM05D007908 ORTHO05D009653 1.6e-28 129.4 101 61.4
Ciclev10010619m.g Citrus clementina HOM05D007908 ORTHO05D009653 2.3e-27 125.6 101 57.4
PGSC0003DMG400015663 Solanum tuberosum HOM05D007908 ORTHO05D009653 3.8e-27 124.8 93 61.3
VMungo0720G1130 Vigna mungo HOM05D024021 ORTHO05D009653 2.1e-25 119.0 101 52.5
Nn4g25076 Nelumbo nucifera HOM05D000414 ORTHO05D009653 3.6e-25 118.2 93 57.0
Nn7g36623 Nelumbo nucifera HOM05D000793 ORTHO05D001191 9.8e-23 110.2 93 52.7
Rhsim05G0128700 Rhododendron simsii HOM05D007908 ORTHO05D009653 7.0e-21 104.0 101 45.5
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 2.0e-20 102.4 101 44.6
TWI18G0694 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 4.5e-20 101.3 101 52.5
TAR237G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.5e-20 101.3 94 45.7
CiPaw.12G035000 Carya illinoinensis HOM05D007908 ORTHO05D009653 3.8e-19 98.2 101 44.6
Rhsim06G0128500 Rhododendron simsii HOM05D007908 ORTHO05D009653 6.6e-19 97.4 100 42.0
PSO063G3207 Papaver somniferum HOM05D007908 ORTHO05D009653 1.9e-18 95.9 90 48.9
CAN.G504.51 Capsicum annuum HOM05D001206 ORTHO05D002068 3.3e-18 95.1 65 61.5
TWI38G1015 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 5.6e-18 94.4 77 57.1
Potri.006G109250 Populus trichocarpa HOM05D007908 ORTHO05D009653 4.7e-17 91.3 69 56.5
Potri.004G133001 Populus trichocarpa HOM05D007908 ORTHO05D009653 1.8e-16 89.4 69 55.1
CiPaw.14G112700 Carya illinoinensis HOM05D007908 ORTHO05D009653 3.4e-15 85.1 69 49.3
CiPaw.07G046700 Carya illinoinensis HOM05D007908 ORTHO05D009653 5.8e-15 84.3 69 49.3
Rhsim04G0131100 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.7e-14 82.8 77 48.1
Rhsim05G0013600 Rhododendron simsii HOM05D007908 ORTHO05D009653 8.3e-14 80.5 72 44.4
Rhsim13G0148200 Rhododendron simsii HOM05D007908 ORTHO05D009653 8.3e-14 80.5 72 44.4
RhsimUnG0157400 Rhododendron simsii HOM05D007908 ORTHO05D009653 8.3e-14 80.5 72 44.4
RhsimUnG0057000 Rhododendron simsii HOM05D007908 ORTHO05D009653 2.4e-13 79.0 72 43.1
Rhsim02G0117000 Rhododendron simsii HOM05D008231 ORTHO05D010646 4.1e-13 78.2 72 43.1
Hma1.2p1_0303F.1_g118800 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 3.5e-12 75.1 71 42.3
Rhsim11G0082000 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.0e-11 73.6 72 40.3
Ciclev10003571m.g Citrus clementina HOM05D007908 ORTHO05D009653 1.7e-11 72.8 63 52.4
CAN.G65.34 Capsicum annuum HOM05D000147 ORTHO05D009653 8.6e-11 70.5 43 67.4
CiPaw.04G138200 Carya illinoinensis HOM05D007908 ORTHO05D009653 1.2e-09 66.6 68 44.1
Ciclev10013850m.g Citrus clementina HOM05D007908 ORTHO05D009653 4.7e-09 64.7 48 54.2
Aqoxy5G03695 Aquilegia oxysepala HOM05D000002 ORTHO05D004756 1.1e-08 63.5 69 39.1
Manes.09G020501 Manihot esculenta HOM05D007908 ORTHO05D009653 1.4e-08 63.2 77 44.2
MD02G1156200 Malus domestica HOM05D000002 ORTHO05D004756 3.1e-08 62.0 69 37.7
VMungo1383G2888 Vigna mungo HOM05D007908 ORTHO05D009653 4.0e-08 61.6 38 65.8
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 6.8e-08 60.8 69 36.2
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 1.2e-07 60.1 69 34.8
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 1.5e-07 59.7 69 36.2
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 1.5e-07 59.7 69 34.8
SHI06223 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 59.7 69 34.8
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 1.5e-07 59.7 69 34.8
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 59.7 69 34.8
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 59.7 82 32.9
SHI31375 Sapria himalayana HOM05D007230 ORTHO05D004756 2.0e-07 59.3 69 34.8
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 2.6e-07 58.9 69 34.8
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 2.6e-07 58.9 69 34.8
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 7.5e-07 57.4 69 34.8
Sabra16G0048200 Salix brachista HOM05D000002 ORTHO05D000047 7.5e-07 57.4 104 32.7
TPR.G24908 Trifolium pratense HOM05D000030 ORTHO05D000031 7.5e-07 57.4 69 34.8
Ciclev10006991m.g Citrus clementina HOM05D007908 ORTHO05D009653 9.8e-07 57.0 38 57.9
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 56.6 69 33.3
CSS0008768 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 4.9e-06 54.7 69 31.9
CSS0016560 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 4.9e-06 54.7 69 31.9
CSS0046298 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 4.9e-06 54.7 69 31.9
CSS0046673 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 4.9e-06 54.7 69 31.9
CSS0047750 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 4.9e-06 54.7 69 31.9
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 4.9e-06 54.7 66 34.8
CiPaw.03G222100 Carya illinoinensis HOM05D007908 ORTHO05D009653 6.4e-06 54.3 42 52.4
Hma1.2p1_1664F.1_g296430 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 6.4e-06 54.3 47 44.7
Hma1.2p1_3592F.1_g336930 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 6.4e-06 54.3 47 44.7
Psat3g110120 Pisum sativum HOM05D000002 ORTHO05D000047 6.4e-06 54.3 69 36.2
Psat5g245120 Pisum sativum HOM05D000002 ORTHO05D000047 6.4e-06 54.3 69 36.2
PGR031G1334 Punica granatum HOM05D000002 ORTHO05D000047 6.4e-06 54.3 96 31.2
Ciclev10017758m.g Citrus clementina HOM05D007908 ORTHO05D009653 8.3e-06 53.9 38 55.3


User provided reference genes

Program Settings