Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 2.0e-86 322.4 163 100.0
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 4.1e-47 191.8 131 74.0
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 3.2e-23 112.5 131 51.1
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 2.3e-21 106.3 122 53.3
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 4.0e-18 95.5 55 67.3
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 1.2e-17 94.0 108 50.9
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 1.2e-17 94.0 119 50.4
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 1.5e-17 93.6 112 52.7
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 1.5e-17 93.6 106 50.9
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 4.4e-17 92.0 135 39.3
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 7.5e-17 91.3 80 56.2
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 7.5e-17 91.3 77 57.1
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 1.3e-16 90.5 95 49.5
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 1.7e-16 90.1 115 46.1
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 1.7e-16 90.1 140 42.9
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 2.2e-16 89.7 96 49.0
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 2.2e-16 89.7 55 67.3
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 2.2e-16 89.7 54 68.5
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 2.2e-16 89.7 56 71.4
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 2.9e-16 89.4 121 47.9
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 3.7e-16 89.0 55 67.3
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 3.7e-16 89.0 96 49.0
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 4.9e-16 88.6 122 46.7
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 8.3e-16 87.8 122 47.5
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 1.1e-15 87.4 56 71.4
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 1.1e-15 87.4 56 71.4
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 1.4e-15 87.0 89 52.8
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 1.4e-15 87.0 112 42.9
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 1.9e-15 86.7 79 57.0
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 1.9e-15 86.7 94 52.1
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 1.9e-15 86.7 63 63.5
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 2.4e-15 86.3 101 49.5
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 3.2e-15 85.9 55 67.3
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 3.2e-15 85.9 91 48.4
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 3.2e-15 85.9 84 52.4
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 4.1e-15 85.5 129 44.2
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 5.4e-15 85.1 58 69.0
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 5.4e-15 85.1 123 41.5
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 5.4e-15 85.1 64 62.5
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 7.0e-15 84.7 82 51.2
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 9.2e-15 84.3 78 55.1
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 9.2e-15 84.3 140 42.1
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 1.2e-14 84.0 82 51.2
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 1.6e-14 83.6 58 67.2
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 1.6e-14 83.6 58 67.2
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.6e-14 83.6 78 52.6
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 2.0e-14 83.2 138 37.0
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 2.7e-14 82.8 61 63.9
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 3.5e-14 82.4 69 53.6
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 3.5e-14 82.4 76 57.9
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 4.6e-14 82.0 84 54.8
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 4.6e-14 82.0 48 79.2
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 6.0e-14 81.6 115 41.7
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 6.0e-14 81.6 62 61.3
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 6.0e-14 81.6 68 57.4
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 6.0e-14 81.6 135 39.3
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 7.8e-14 81.3 81 53.1
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 7.8e-14 81.3 76 52.6
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 1.7e-13 80.1 59 59.3
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 1.7e-13 80.1 94 45.7
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 1.7e-13 80.1 130 40.8
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 5.0e-13 78.6 50 66.0
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 5.0e-13 78.6 43 72.1
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 8.6e-13 77.8 98 43.9
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 1.1e-12 77.4 63 52.4
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.1e-12 77.4 123 40.7
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 1.9e-12 76.6 120 40.8
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.9e-12 76.6 45 80.0
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.9e-12 76.6 45 80.0
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 1.9e-12 76.6 45 80.0
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 4.3e-12 75.5 35 85.7
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 5.6e-12 75.1 92 45.7
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 5.6e-12 75.1 57 56.1
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 5.6e-12 75.1 57 56.1
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 7.3e-12 74.7 137 40.1
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 7.3e-12 74.7 57 56.1
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 9.5e-12 74.3 71 47.9
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 9.5e-12 74.3 38 78.9
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 1.6e-11 73.6 36 80.6
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 2.1e-11 73.2 43 74.4
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 2.1e-11 73.2 98 43.9
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 2.1e-11 73.2 40 82.5
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 2.8e-11 72.8 36 77.8
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 8.0e-11 71.2 41 75.6
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 1.1e-10 70.9 39 71.8
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 4.0e-10 68.9 126 34.1
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 4.0e-10 68.9 44 63.6
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 4.0e-10 68.9 65 53.8
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 5.2e-10 68.6 144 32.6
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 6.8e-10 68.2 33 81.8
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 6.8e-10 68.2 48 60.4
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 8.9e-10 67.8 28 92.9
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 1.2e-09 67.4 42 64.3
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 1.2e-09 67.4 40 65.0
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 1.5e-09 67.0 28 89.3
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 1.5e-09 67.0 32 78.1
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 2.6e-09 66.2 40 70.0
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 3.4e-09 65.9 124 35.5
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 5.8e-09 65.1 60 53.3
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 7.5e-09 64.7 31 80.6
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 7.5e-09 64.7 31 80.6
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 7.5e-09 64.7 35 74.3
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 1.3e-08 63.9 120 35.0
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 1.2e-06 57.4 60 48.3


User provided reference genes

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