Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G005500 Carya illinoinensis HOM05D002873 ORTHO05D002978 6.1e-13 77.0 68 100.0
CiPaw.04G005400 Carya illinoinensis HOM05D002873 ORTHO05D002978 1.2e-11 72.8 68 95.6
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 2.2e-10 68.6 68 77.9
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 3.7e-10 67.8 68 66.2
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 1.1e-09 66.2 68 60.3
Sed0018699 Sechium edule HOM05D002873 ORTHO05D002978 1.4e-09 65.9 68 76.5
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 1.4e-09 65.9 68 67.6
Thecc.04G146000 Theobroma cacao HOM05D002873 ORTHO05D002978 7.0e-09 63.5 68 75.0
MELO3C005500.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.6e-08 62.4 68 69.1
Thhalv10028020m.g Eutrema salsugineum HOM05D002873 ORTHO05D002978 4.5e-08 60.8 68 75.0
Peaxi162Scf01056g00020 Petunia axillaris HOM05D002873 ORTHO05D002978 4.5e-08 60.8 66 78.8
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 1.0e-07 59.7 68 51.5
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 1.0e-07 59.7 68 51.5
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 1.0e-07 59.7 68 51.5
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.7e-07 58.9 68 63.2
BraA10t43210Z Brassica rapa HOM05D002873 ORTHO05D002978 2.3e-07 58.5 68 69.1
Potri.017G108400 Populus trichocarpa HOM05D002873 ORTHO05D002978 2.3e-07 58.5 68 63.2
Sabra04G0074600 Salix brachista HOM05D002873 ORTHO05D002978 2.3e-07 58.5 68 67.6
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 2.9e-07 58.2 69 62.3
Oeu049338.1 Olea europaea HOM05D002873 ORTHO05D002978 2.9e-07 58.2 66 80.3
Potri.017G108300 Populus trichocarpa HOM05D002873 ORTHO05D002978 2.9e-07 58.2 68 64.7
Potri.017G108350 Populus trichocarpa HOM05D002873 ORTHO05D002978 2.9e-07 58.2 68 64.7
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 2.9e-07 58.2 68 50.0
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 3.8e-07 57.8 68 47.1
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 3.8e-07 57.8 68 47.1
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 3.8e-07 57.8 68 60.3
FvH4_6g45802 Fragaria vesca HOM05D002873 ORTHO05D002978 5.0e-07 57.4 68 82.4
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 5.0e-07 57.4 68 82.4
FAN05G0873 Fragaria x ananassa HOM05D002873 ORTHO05D002978 5.0e-07 57.4 68 82.4
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 5.0e-07 57.4 68 50.0
Sed0026500 Sechium edule HOM05D002873 ORTHO05D002978 5.0e-07 57.4 68 82.4
Solyc02g089580.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 5.0e-07 57.4 66 81.8
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 5.0e-07 57.4 66 59.1
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 5.0e-07 57.4 66 59.1
FAN09G4825 Fragaria x ananassa HOM05D002873 ORTHO05D002978 6.6e-07 57.0 68 82.4
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 6.6e-07 57.0 68 64.7
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 8.6e-07 56.6 68 48.5
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 8.6e-07 56.6 68 47.1
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 8.6e-07 56.6 68 45.6
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 1.1e-06 56.2 68 45.6
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 1.1e-06 56.2 68 45.6
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 1.1e-06 56.2 68 45.6
Cfa007996 Carpinus fangiana HOM05D002873 ORTHO05D002978 1.1e-06 56.2 68 72.1
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.1e-06 56.2 68 58.8
Duzib138G1180 Durio zibethinus HOM05D002873 ORTHO05D002978 1.1e-06 56.2 69 82.6
A10p11190 Brassica napus HOM05D002873 ORTHO05D002978 1.5e-06 55.8 68 66.2
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.5e-06 55.8 68 58.8
Thhalv10015216m.g Eutrema salsugineum HOM05D002873 ORTHO05D002978 1.5e-06 55.8 68 64.7
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 1.5e-06 55.8 66 60.6
BcaC01g04444 Brassica carinata HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 56.7
C03p40070 Brassica napus HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 56.7
BolC3t16273H Brassica oleracea HOM05D002873 ORTHO05D002978 1.9e-06 55.5 67 56.7
BcaB08g35740 Brassica carinata HOM05D002873 ORTHO05D002978 2.5e-06 55.1 68 67.6
MELO3C022081.2 Cucumis melo HOM05D002873 ORTHO05D002978 2.5e-06 55.1 37 78.4
Migut.H00561 Erythranthe guttata HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 63.6
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 2.5e-06 55.1 66 62.1
Sabra04G0074500 Salix brachista HOM05D002873 ORTHO05D002978 2.5e-06 55.1 68 64.7
THA.LOC109116670 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 2.5e-06 55.1 36 75.0
THA.LOC109116986 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 2.5e-06 55.1 67 61.2
CAN.G497.26 Capsicum annuum HOM05D002873 ORTHO05D002978 3.3e-06 54.7 66 78.8
CAN.G497.27 Capsicum annuum HOM05D002873 ORTHO05D002978 3.3e-06 54.7 66 78.8
Duzib268G0192 Durio zibethinus HOM05D002873 ORTHO05D002978 3.3e-06 54.7 69 78.3
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 4.2e-06 54.3 66 59.1
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 4.2e-06 54.3 65 49.2
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 4.2e-06 54.3 65 49.2
CSS0045706 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 4.2e-06 54.3 66 69.7
CSS0047860 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 4.2e-06 54.3 66 69.7
Migut.K00873 Erythranthe guttata HOM05D002873 ORTHO05D002978 4.2e-06 54.3 66 80.3
Oeu032858.1 Olea europaea HOM05D002873 ORTHO05D002978 4.2e-06 54.3 66 71.2
SpUn0185_0020 Schrenkiella parvula HOM05D002873 ORTHO05D002978 4.2e-06 54.3 68 76.5
A03p32950 Brassica napus HOM05D002873 ORTHO05D002978 5.5e-06 53.9 67 53.7
BraA03t12463Z Brassica rapa HOM05D002873 ORTHO05D002978 5.5e-06 53.9 67 53.7
Carub.0008s1411 Capsella rubella HOM05D002873 ORTHO05D002978 5.5e-06 53.9 68 58.8
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 5.5e-06 53.9 68 52.9
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 5.5e-06 53.9 68 47.1
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 5.5e-06 53.9 66 47.0
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 7.2e-06 53.5 68 44.1
MD17G1070100 Malus domestica HOM05D002873 ORTHO05D002978 7.2e-06 53.5 68 66.2
Actinidia18105 Actinidia chinensis HOM05D002873 ORTHO05D002978 9.5e-06 53.1 66 59.1
C09p43800 Brassica napus HOM05D002873 ORTHO05D002978 9.5e-06 53.1 68 63.2
BolC9t57265H Brassica oleracea HOM05D002873 ORTHO05D002978 9.5e-06 53.1 68 63.2
Dinv36852 Davidia involucrata HOM05D002873 ORTHO05D002978 9.5e-06 53.1 67 53.7
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 9.5e-06 53.1 66 65.2


User provided reference genes

Program Settings