Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 5.7e-147 524.2 267 100.0
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 3.6e-117 425.2 271 81.9
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 7.5e-115 417.5 273 82.1
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 2.4e-113 412.5 275 80.4
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 3.7e-106 388.7 278 75.2
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 3.0e-103 379.0 275 73.5
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 5.0e-103 378.3 277 74.7
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 3.3e-102 375.6 270 74.4
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 2.1e-101 372.9 273 70.3
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 2.1e-101 372.9 273 70.3
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 3.1e-100 369.0 279 72.4
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 4.0e-100 368.6 280 71.8
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 1.2e-99 367.1 275 71.6
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.2e-99 367.1 273 69.6
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 1.5e-99 366.7 247 78.5
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 2.6e-99 365.9 279 71.7
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 9.8e-99 364.0 272 73.5
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 2.9e-98 362.5 267 72.3
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 8.3e-98 360.9 239 78.2
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 8.3e-98 360.9 270 73.3
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 8.3e-98 360.9 271 73.1
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 2.7e-96 355.9 271 73.1
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 6.0e-96 354.8 280 70.0
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 1.3e-95 353.6 263 74.1
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 2.3e-95 352.8 238 75.6
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 1.5e-94 350.1 272 71.3
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 1.9e-94 349.7 284 68.3
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.9e-94 349.7 269 70.3
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 2.5e-94 349.4 263 74.1
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 3.3e-94 349.0 271 69.7
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 3.3e-94 349.0 279 67.7
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 5.6e-94 348.2 267 70.8
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 1.4e-92 343.6 268 71.3
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 1.4e-92 343.6 266 69.9
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 3.1e-92 342.4 271 66.8
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 4.0e-92 342.0 231 77.5
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 4.0e-92 342.0 267 69.3
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 5.2e-92 341.7 273 67.0
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 1.2e-91 340.5 276 69.9
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.2e-91 340.5 231 77.1
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 1.2e-91 340.5 189 89.4
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 2.0e-91 339.7 271 68.6
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 2.6e-91 339.3 269 68.4
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.6e-91 339.3 231 76.6
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 2.6e-91 339.3 212 81.1
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 1.3e-90 337.0 269 69.9
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 1.7e-90 336.7 272 69.9
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 6.4e-90 334.7 268 68.7
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 1.1e-89 334.0 277 68.2
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.4e-89 333.6 272 66.5
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 2.4e-89 332.8 267 68.9
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 4.1e-89 332.0 275 68.4
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 4.1e-89 332.0 189 89.4
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 7.1e-89 331.3 188 88.3
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 9.2e-89 330.9 265 67.5
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 1.2e-88 330.5 275 67.6
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 1.2e-88 330.5 229 74.7
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 2.1e-88 329.7 234 74.8
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 3.5e-88 328.9 266 69.2
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 6.0e-88 328.2 291 67.4
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 6.0e-88 328.2 280 67.5
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 7.8e-88 327.8 272 65.1
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 1.3e-87 327.0 195 86.2
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 2.3e-87 326.2 257 71.2
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 2.3e-87 326.2 274 68.2
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 5.1e-87 325.1 256 69.5
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 1.5e-86 323.6 192 87.0
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.9e-86 323.2 280 66.8
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.9e-86 323.2 242 69.4
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 2.5e-86 322.8 201 83.6
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 5.6e-86 321.6 258 67.8
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 7.3e-86 321.2 268 67.2
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 9.6e-86 320.9 273 65.6
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 9.6e-86 320.9 275 65.8
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 9.6e-86 320.9 202 83.2
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 1.2e-85 320.5 268 66.0
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 1.6e-85 320.1 215 77.2
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 2.1e-85 319.7 232 72.4
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 2.1e-85 319.7 215 77.2
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 2.8e-85 319.3 215 77.2
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 4.7e-85 318.5 214 77.1
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 4.7e-85 318.5 196 83.2
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 6.2e-85 318.2 215 76.7
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 1.8e-84 316.6 215 76.3
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 1.8e-84 316.6 215 76.3
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 3.1e-84 315.8 265 66.4
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 6.8e-84 314.7 213 76.1
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 1.5e-83 313.5 232 70.7
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 7.6e-83 311.2 238 69.3
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 9.9e-83 310.8 213 74.6
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 4.9e-82 308.5 238 69.3
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 8.4e-82 307.8 213 73.7
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 1.4e-81 307.0 213 73.2
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 3.2e-81 305.8 213 75.1
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 1.7e-79 300.1 185 82.2
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 8.7e-79 297.7 269 62.5
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 4.3e-78 295.4 185 77.8
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 5.6e-78 295.0 185 77.3
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 5.8e-75 285.0 238 64.7
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 2.4e-73 279.6 230 68.7
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 4.2e-73 278.9 274 57.7
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 7.9e-72 274.6 195 69.2
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 5.3e-68 261.9 188 67.6
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 2.0e-67 260.0 176 76.1
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 1.2e-64 250.8 194 64.4
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 1.1e-62 244.2 270 53.0
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 9.6e-62 241.1 213 59.2
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 9.0e-60 234.6 169 74.0
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 2.1e-56 223.4 141 80.1
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 2.0e-51 206.8 207 59.9
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 7.2e-49 198.4 216 48.6
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 1.0e-47 194.5 201 54.7
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 6.7e-47 191.8 110 85.5
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 7.4e-46 188.3 185 51.4
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 1.4e-44 184.1 134 70.1
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.7e-42 177.2 110 76.4
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 3.9e-39 166.0 188 47.3
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.1e-30 137.9 117 65.8
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 8.5e-26 121.7 82 72.0
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 4.7e-16 89.4 109 51.4
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 4.0e-15 86.3 50 82.0
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 1.7e-13 80.9 93 52.7
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 7.7e-11 72.0 44 79.5
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 1.9e-09 67.4 44 68.2
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 1.4e-07 61.2 65 52.3


User provided reference genes

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