Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 3.0e-204 714.9 348 100.0
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 5.3e-161 571.2 341 81.2
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 4.3e-155 551.6 366 75.4
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 6.1e-149 531.2 396 70.2
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 5.9e-136 488.0 345 69.3
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 2.7e-133 479.2 344 68.0
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 8.0e-133 477.6 342 70.5
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 4.4e-131 471.9 349 66.5
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 2.2e-130 469.5 344 66.6
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 1.8e-129 466.5 346 66.5
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 2.4e-129 466.1 349 67.6
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 1.2e-128 463.8 354 65.5
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 5.9e-128 461.5 346 65.6
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 2.2e-127 459.5 344 67.4
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 6.5e-127 458.0 342 65.5
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 1.1e-126 457.2 342 64.9
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.5e-126 456.8 342 64.9
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 4.2e-126 455.3 357 63.6
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 5.5e-126 454.9 350 64.6
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 6.1e-125 451.4 346 65.3
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 1.8e-124 449.9 343 66.2
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 8.3e-122 441.0 347 64.6
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.2e-120 437.2 348 66.7
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 3.5e-120 435.6 345 63.5
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 2.5e-118 429.5 350 62.3
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 4.2e-118 428.7 339 63.1
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 4.7e-117 425.2 352 59.4
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 5.2e-116 421.8 344 61.3
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 3.4e-115 419.1 333 62.8
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 4.4e-115 418.7 278 71.6
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 5.7e-115 418.3 339 62.8
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 1.7e-114 416.8 346 62.7
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 4.9e-114 415.2 266 74.1
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 1.1e-113 414.1 278 71.2
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 1.4e-113 413.7 345 61.7
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 1.8e-113 413.3 350 59.7
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 1.8e-113 413.3 350 57.7
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 4.1e-113 412.1 356 60.4
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 7.0e-113 411.4 348 60.1
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 1.6e-112 410.2 344 62.2
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 1.7e-111 406.8 343 59.5
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 2.9e-111 406.0 349 60.2
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 1.1e-110 404.1 349 59.6
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.2e-109 400.6 338 61.2
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 1.2e-109 400.6 341 61.0
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 2.1e-109 399.8 339 58.1
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 2.1e-109 399.8 341 59.5
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 4.7e-109 398.7 299 65.6
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 5.2e-108 395.2 347 60.5
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 2.6e-107 392.9 346 57.5
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 4.4e-107 392.1 257 70.4
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 7.5e-107 391.3 342 57.0
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 9.8e-107 391.0 343 59.2
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.3e-106 390.6 365 56.7
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.3e-106 390.6 365 56.7
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 3.7e-106 389.0 352 54.5
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 3.7e-106 389.0 257 70.0
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 6.4e-106 388.3 436 52.3
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 1.4e-105 387.1 230 76.5
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 9.2e-105 384.4 240 73.8
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.6e-104 383.6 350 56.3
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 2.0e-104 383.3 307 61.6
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 2.7e-104 382.9 345 55.4
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 1.3e-103 380.6 345 55.1
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 1.3e-103 380.6 345 55.1
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 5.0e-103 378.6 347 54.8
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 1.1e-102 377.5 333 55.9
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 5.6e-102 375.2 254 68.1
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 1.2e-101 374.0 343 57.1
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 1.2e-101 374.0 333 55.3
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 1.6e-101 373.6 338 58.3
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 2.8e-101 372.9 236 72.0
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 3.6e-101 372.5 236 71.6
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 6.2e-101 371.7 238 70.2
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 8.0e-101 371.3 366 51.6
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 1.0e-100 370.9 345 55.4
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 3.7e-98 362.5 238 68.1
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 8.3e-98 361.3 349 55.0
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 1.4e-97 360.5 346 53.5
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 1.6e-96 357.1 211 74.4
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 4.6e-96 355.5 354 53.4
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 2.3e-95 353.2 260 70.8
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 8.6e-95 351.3 220 74.1
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 8.6e-95 351.3 334 54.8
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 3.6e-93 345.9 337 52.2
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 3.1e-92 342.8 210 75.7
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 9.2e-89 331.3 347 53.6
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 2.3e-87 326.6 239 68.2
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 5.1e-87 325.5 247 64.4
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 3.1e-84 316.2 321 50.5
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 2.6e-83 313.2 198 72.2
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 9.9e-83 311.2 276 60.1
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 6.4e-82 308.5 174 79.3
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.7e-79 300.4 244 62.7
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 1.7e-74 283.9 291 53.3
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 5.4e-73 278.9 287 50.9
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 9.3e-73 278.1 264 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 2.4e-68 263.5 284 47.2
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 9.0e-68 261.5 265 53.2
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 3.4e-67 259.6 234 58.1
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 9.9e-67 258.1 303 46.5
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 2.2e-66 256.9 226 54.4
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 2.2e-66 256.9 224 50.9
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 6.0e-48 195.7 233 42.1
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 3.6e-40 169.9 207 39.1
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.1e-38 164.9 108 70.4
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.2e-37 160.6 108 69.4
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 2.2e-37 160.6 202 44.1
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.2e-32 144.8 97 66.0
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.8e-31 141.0 89 71.9
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 6.3e-21 105.9 167 38.9
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 1.2e-19 101.7 136 49.3
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 5.5e-17 92.8 50 86.0
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 8.2e-13 79.0 47 70.2
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 6.1e-08 62.8 121 32.2
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 2.3e-07 60.8 141 34.8
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 6.8e-07 59.3 141 34.0


User provided reference genes

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