Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G278900 Carya illinoinensis HOM05D004793 ORTHO05D004423 1.6e-80 302.8 157 100.0
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 4.4e-30 135.2 127 68.5
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 2.5e-25 119.4 127 59.1
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 4.7e-24 115.2 128 57.8
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 4.4e-22 108.6 129 57.4
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 8.3e-21 104.4 128 50.8
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 1.8e-20 103.2 137 49.6
Prupe.3G201300 Prunus persica HOM05D004793 ORTHO05D004423 3.1e-20 102.4 132 51.5
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 7.0e-20 101.3 129 55.0
Gohir.D07G197000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.7e-19 99.4 128 51.6
Gorai.001G220800 Gossypium raimondii HOM05D004793 ORTHO05D004423 2.7e-19 99.4 128 51.6
LjContig00081g0018270 Lotus japonicus HOM05D004793 ORTHO05D004423 3.5e-19 99.0 134 53.0
Sabra14G0125700 Salix brachista HOM05D004793 ORTHO05D004423 3.5e-19 99.0 136 48.5
Gohir.A07G190700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 5.9e-19 98.2 128 51.6
FAN14G5076 Fragaria x ananassa HOM05D004793 ORTHO05D004423 2.3e-18 96.3 130 51.5
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 2.9e-18 95.9 130 53.1
FvH4_6g41090 Fragaria vesca HOM05D004793 ORTHO05D004423 5.0e-18 95.1 130 51.5
Hma1.2p1_0133F.1_g061430 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 5.0e-18 95.1 129 51.9
Hma1.2p1_1825F.1_g304390 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 6.5e-18 94.7 129 51.9
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 2.5e-17 92.8 130 50.0
Medtr5g097300 Medicago truncatula HOM05D004793 ORTHO05D004423 5.5e-17 91.7 127 49.6
CSS0020838 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 9.5e-17 90.9 128 47.7
CSS0047668 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 9.5e-17 90.9 128 47.7
Potri.014G165000 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.2e-16 90.5 139 46.0
TPR.G1320 Trifolium pratense HOM05D004793 ORTHO05D004423 1.2e-16 90.5 128 47.7
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 2.8e-16 89.4 160 43.8
Glyma.14G007800 Glycine max HOM05D004793 ORTHO05D004423 3.6e-16 89.0 133 49.6
Cpa.g.sc211.5 Carica papaya HOM05D004793 ORTHO05D004423 3.0e-15 85.9 131 49.6
Glyma.02G305500 Glycine max HOM05D004793 ORTHO05D004423 3.0e-15 85.9 134 47.8
VMungo0647G0475 Vigna mungo HOM05D004793 ORTHO05D004423 8.9e-15 84.3 137 46.7
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 1.5e-14 83.6 128 46.9
Ca_06456_v3 Cicer arietinum L. HOM05D004793 ORTHO05D004423 3.4e-14 82.4 129 46.5
Aqoxy1G04226 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 6.3e-13 78.2 130 41.5
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 1.4e-12 77.0 128 43.0
Sed0008787 Sechium edule HOM05D004793 ORTHO05D004423 1.8e-12 76.6 131 45.8
Haze_12687 Corylus avellana HOM05D004793 ORTHO05D004423 2.4e-12 76.3 144 48.6
Psat2g004520 Pisum sativum HOM05D004793 ORTHO05D004423 4.1e-12 75.5 129 46.5
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 4.1e-12 75.5 128 43.8
Eucgr.A01045 Eucalyptus grandis HOM05D004793 ORTHO05D004423 7.0e-12 74.7 135 43.0
ClCG02G002720 Citrullus lanatus HOM05D000222 ORTHO05D003997 3.5e-11 72.4 115 47.0
TWI36G0659 Tripterygium wilfordii HOM05D004793 ORTHO05D004423 7.8e-11 71.2 131 42.7
Lalb_Chr04g0247291 Lupinus albus HOM05D004793 ORTHO05D004423 1.3e-10 70.5 127 40.2
Lalb_Chr04g0247481 Lupinus albus HOM05D004793 ORTHO05D004423 1.3e-10 70.5 127 40.2
Oeu057608.1 Olea europaea HOM05D004793 ORTHO05D004423 1.3e-10 70.5 129 41.9
Oeu064364.1 Olea europaea HOM05D004793 ORTHO05D004423 1.3e-10 70.5 129 41.9
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 1.7e-10 70.1 128 39.1
PGR142G2586 Punica granatum HOM05D004793 ORTHO05D004423 1.7e-10 70.1 129 46.5
Phvul.008G285200 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 3.8e-10 68.9 131 43.5
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 6.6e-10 68.2 132 43.2
MELO3C024110.2 Cucumis melo HOM05D004793 ORTHO05D004423 1.9e-09 66.6 133 42.9
Lsat_1_v5_gn_5_121620 Lactuca sativa HOM05D004793 ORTHO05D004423 3.3e-09 65.9 135 43.0
CSS0019001 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 4.3e-09 65.5 133 45.1
DCAR_019706 Daucus carota HOM05D004793 ORTHO05D004423 9.5e-09 64.3 136 39.7
ECA234G3783 Erigeron canadensis HOM05D004793 ORTHO05D004423 1.2e-08 63.9 147 40.8
Lalb_Chr15g0088081 Lupinus albus HOM05D004793 ORTHO05D004423 1.2e-08 63.9 143 39.2
Psat4g002280 Pisum sativum HOM05D004793 ORTHO05D004423 1.6e-08 63.5 141 35.5
Glyma.09G012000 Glycine max HOM05D004793 ORTHO05D004423 2.1e-08 63.2 144 38.2
Cpa.g.sc2750.2 Carica papaya HOM05D004793 ORTHO05D004423 2.8e-08 62.8 131 38.9
Sabra16G0013200 Salix brachista HOM05D004793 ORTHO05D004423 2.8e-08 62.8 133 38.3
Eucgr.K00650 Eucalyptus grandis HOM05D004793 ORTHO05D004423 3.6e-08 62.4 133 37.6
Thecc.07G019600 Theobroma cacao HOM05D004793 ORTHO05D004423 4.7e-08 62.0 128 45.3
TPR.G10593 Trifolium pratense HOM05D004793 ORTHO05D004423 4.7e-08 62.0 148 38.5
GSVIVG01002881001 Vitis vinifera HOM05D000222 ORTHO05D003997 4.7e-08 62.0 144 40.3
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 6.1e-08 61.6 131 38.2
Duzib170G0463 Durio zibethinus HOM05D004793 ORTHO05D004423 6.1e-08 61.6 129 42.6
Duzib170G0743 Durio zibethinus HOM05D004793 ORTHO05D004423 6.1e-08 61.6 129 42.6
Gohir.A07G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 8.0e-08 61.2 127 40.9
Potri.016G009200 Populus trichocarpa HOM05D004793 ORTHO05D004423 8.0e-08 61.2 134 37.3
CsaV3_7G023710 Cucumis sativus L. HOM05D004793 ORTHO05D004423 1.0e-07 60.8 99 44.4
Glyma.15G116700 Glycine max HOM05D004793 ORTHO05D004423 1.0e-07 60.8 138 37.7
Phvul.006G141500 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 1.0e-07 60.8 135 40.0
CAN.G1397.7 Capsicum annuum HOM05D037802 ORTHO05D004423 1.4e-07 60.5 129 39.5
Oeu063642.1 Olea europaea HOM05D004793 ORTHO05D004423 1.4e-07 60.5 126 36.5
CSS0021588 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 1.8e-07 60.1 130 36.9
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 3.0e-07 59.3 135 36.3
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 3.0e-07 59.3 130 40.0
Lj6g0021600 Lotus japonicus HOM05D004793 ORTHO05D004423 3.0e-07 59.3 138 37.7
Gohir.A01G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 5.2e-07 58.5 116 42.2
CAN.G294.21 Capsicum annuum HOM05D004793 ORTHO05D004423 6.8e-07 58.2 130 36.2
Potri.006G016500 Populus trichocarpa HOM05D004793 ORTHO05D004423 6.8e-07 58.2 137 37.2
Cc02_g34950 Coffea canephora HOM05D004793 ORTHO05D004423 8.9e-07 57.8 141 36.2
Manes.15G062700 Manihot esculenta HOM05D004793 ORTHO05D004423 8.9e-07 57.8 131 37.4
Psat1g178240 Pisum sativum HOM05D004793 ORTHO05D004423 8.9e-07 57.8 145 37.2
CiPaw.10G079700 Carya illinoinensis HOM05D004793 ORTHO05D004423 1.2e-06 57.4 140 37.1
Gohir.D01G074100 Gossypium hirsutum HOM05D004793 ORTHO05D004423 1.2e-06 57.4 127 41.7
Gorai.001G099200 Gossypium raimondii HOM05D004793 ORTHO05D004423 1.2e-06 57.4 134 38.8
CSS0022938 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 2.0e-06 56.6 130 36.9
Gohir.D07G092600 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.0e-06 56.6 134 38.8
Potri.011G086300 Populus trichocarpa HOM05D004793 ORTHO05D004423 2.0e-06 56.6 89 44.9
Cc09_g04750 Coffea canephora HOM05D004793 ORTHO05D004423 2.6e-06 56.2 133 34.6
Haze_09795 Corylus avellana HOM05D004793 ORTHO05D004423 2.6e-06 56.2 127 38.6
Eucgr.D01438 Eucalyptus grandis HOM05D004793 ORTHO05D004423 2.6e-06 56.2 142 36.6
Lsat_1_v5_gn_7_13860 Lactuca sativa HOM05D004793 ORTHO05D004423 2.6e-06 56.2 152 37.5
Migut.M00035 Erythranthe guttata HOM05D004793 ORTHO05D004423 3.4e-06 55.8 127 35.4
Oeu029974.1 Olea europaea HOM05D027131 ORTHO05D013900 3.4e-06 55.8 90 40.0
Rhsim04G0014600 Rhododendron simsii HOM05D004793 ORTHO05D004423 3.4e-06 55.8 141 39.0
Sopen07g024260 Solanum pennellii HOM05D037802 ORTHO05D004423 3.4e-06 55.8 121 39.7
Lsat_1_v5_gn_7_95461 Lactuca sativa HOM05D004793 ORTHO05D004423 4.4e-06 55.5 116 39.7
Medtr2g026510 Medicago truncatula HOM05D004793 ORTHO05D004423 4.4e-06 55.5 142 38.7
Solyc07g047827.1 Solanum lycopersicum HOM05D037802 ORTHO05D004423 5.8e-06 55.1 121 39.7
Cfa020226 Carpinus fangiana HOM05D004793 ORTHO05D004423 7.5e-06 54.7 130 37.7
Prupe.4G007200 Prunus persica HOM05D004793 ORTHO05D004423 7.5e-06 54.7 159 34.6


User provided reference genes

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