Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 4.8e-57 224.2 106 100.0
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 1.2e-47 193.0 105 80.0
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 2.0e-47 192.2 106 81.1
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 7.7e-47 190.3 106 81.1
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 7.7e-47 190.3 106 81.1
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 7.7e-47 190.3 106 80.2
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 1.0e-46 189.9 106 81.1
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 1.7e-46 189.1 106 80.2
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.7e-46 189.1 106 80.2
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 5.0e-46 187.6 106 78.3
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 3.2e-45 184.9 103 77.7
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 2.8e-44 181.8 105 75.2
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 3.6e-44 181.4 104 76.0
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 3.6e-44 181.4 106 73.6
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 6.1e-44 180.6 106 73.6
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 6.1e-44 180.6 105 74.3
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 8.0e-44 180.3 104 74.0
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 1.8e-43 179.1 102 78.4
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 1.8e-43 179.1 102 78.4
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 2.3e-43 178.7 106 74.5
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 3.0e-43 178.3 106 74.5
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 5.2e-43 177.6 104 74.0
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 6.8e-43 177.2 103 72.8
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.2e-42 176.4 106 73.6
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.5e-42 176.0 106 73.6
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 1.5e-42 176.0 106 74.5
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 1.5e-42 176.0 105 72.4
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 2.0e-42 175.6 104 74.0
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 2.6e-42 175.3 104 74.0
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 3.4e-42 174.9 101 74.3
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 4.4e-42 174.5 106 72.6
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 9.8e-42 173.3 103 72.8
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.3e-41 172.9 106 71.7
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 1.3e-41 172.9 102 74.5
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 2.2e-41 172.2 103 68.9
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 2.8e-41 171.8 103 72.8
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 3.7e-41 171.4 106 70.8
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 4.9e-41 171.0 103 71.8
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 6.3e-41 170.6 92 84.8
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 4.1e-40 167.9 103 70.9
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 7.0e-40 167.2 104 68.3
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 1.2e-39 166.4 96 74.0
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 1.2e-39 166.4 105 68.6
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 2.0e-39 165.6 104 69.2
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 3.5e-39 164.9 101 69.3
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 7.8e-39 163.7 102 68.6
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 7.8e-39 163.7 105 70.5
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 1.7e-38 162.5 101 69.3
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 1.7e-38 162.5 101 69.3
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 1.7e-38 162.5 101 68.3
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 6.6e-38 160.6 103 68.0
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 8.6e-38 160.2 100 70.0
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 7.3e-37 157.1 96 70.8
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 9.5e-37 156.8 100 69.0
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 9.5e-37 156.8 90 74.4
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.2e-36 156.4 91 75.8
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.2e-36 156.4 101 68.3
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 1.6e-36 156.0 101 68.3
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 3.6e-36 154.8 101 67.3
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 3.6e-36 154.8 101 71.3
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 3.6e-36 154.8 101 71.3
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 6.1e-36 154.1 85 78.8
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 8.0e-36 153.7 124 61.3
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 1.8e-35 152.5 101 66.3
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 1.8e-35 152.5 102 64.7
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 2.3e-35 152.1 101 66.3
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.3e-35 152.1 103 64.1
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 6.8e-35 150.6 104 64.4
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.2e-34 149.8 104 65.4
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 1.2e-34 149.8 106 64.2
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 3.4e-34 148.3 102 63.7
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 1.3e-33 146.4 101 61.4
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 6.4e-33 144.1 91 71.4
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 3.2e-32 141.7 101 62.4
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 3.2e-32 141.7 101 62.4
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.2e-31 139.8 103 60.2
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 1.6e-31 139.4 103 61.2
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 2.7e-31 138.7 106 60.4
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 2.7e-31 138.7 106 60.4
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 4.6e-31 137.9 93 65.6
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 1.7e-30 136.0 100 56.0
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.3e-30 135.6 85 68.2
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 5.0e-30 134.4 98 61.2
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 8.6e-30 133.7 103 58.3
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 1.9e-29 132.5 102 55.9
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 2.5e-29 132.1 103 56.3
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 3.3e-29 131.7 63 81.0
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 4.3e-29 131.3 99 55.6
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 9.5e-29 130.2 103 56.3
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 5.2e-27 124.4 117 53.8
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.5e-26 122.9 102 56.9
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 3.4e-26 121.7 88 59.1
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 3.4e-26 121.7 91 59.3
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 1.3e-25 119.8 94 53.2
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 3.7e-25 118.2 100 46.0
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 1.1e-24 116.7 92 62.0
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 1.4e-24 116.3 103 52.4
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 3.2e-24 115.2 100 53.0
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 7.0e-24 114.0 100 52.0
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 1.2e-23 113.2 100 52.0
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 3.5e-23 111.7 107 49.5
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 3.5e-23 111.7 99 49.5
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.0e-22 110.2 64 71.9
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 1.7e-22 109.4 91 53.8
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 2.3e-22 109.0 63 66.7
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 3.9e-22 108.2 108 47.2
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 9.5e-21 103.6 111 45.9
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 1.3e-17 93.2 44 88.6
QL03p062338 Quercus lobata HOM05D007077 ORTHO05D008853 2.8e-12 75.5 59 66.1
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 1.2e-10 70.1 97 37.1


User provided reference genes

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