Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G239800 Carya illinoinensis HOM05D007420 ORTHO05D009353 4.5e-36 154.1 78 100.0
CANSAT56G4260 Cannabis sativa HOM05D007420 ORTHO05D009353 1.2e-28 129.4 78 82.1
Eucgr.C01109 Eucalyptus grandis HOM05D007420 ORTHO05D009353 3.5e-28 127.9 78 80.8
Atru.chr7.1239 Acer truncatum HOM05D007420 ORTHO05D009353 5.0e-27 124.0 78 78.2
Phvul.003G161000 Phaseolus vulgaris HOM05D007420 ORTHO05D009353 5.0e-27 124.0 78 76.9
Gohir.A06G058200 Gossypium hirsutum HOM05D007420 ORTHO05D009353 1.1e-26 122.9 78 76.9
Gohir.D06G056500 Gossypium hirsutum HOM05D007420 ORTHO05D009353 1.1e-26 122.9 78 76.9
Haze_25622 Corylus avellana HOM05D007420 ORTHO05D009353 2.5e-26 121.7 70 82.9
Manes.06G052500 Manihot esculenta HOM05D007420 ORTHO05D009353 2.5e-26 121.7 78 74.4
Potri.011G024500 Populus trichocarpa HOM05D007420 ORTHO05D009353 2.5e-26 121.7 80 76.2
Lalb_Chr13g0302091 Lupinus albus HOM05D007420 ORTHO05D009353 4.2e-26 120.9 78 75.6
Oeu021594.1 Olea europaea HOM05D007420 ORTHO05D009353 9.4e-26 119.8 78 78.2
Cfa003340 Carpinus fangiana HOM05D007420 ORTHO05D009353 2.1e-25 118.6 68 83.8
QL02p087339 Quercus lobata HOM05D007420 ORTHO05D009353 2.7e-25 118.2 71 83.1
THA.LOC104809007 Tarenaya hassleriana HOM05D007420 ORTHO05D009353 4.7e-25 117.5 80 73.8
TWI34G1269 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 8.0e-25 116.7 80 75.0
PGR102G0502 Punica granatum HOM05D007420 ORTHO05D009353 1.8e-24 115.5 77 68.8
Sed0006703 Sechium edule HOM05D007420 ORTHO05D009353 1.8e-24 115.5 78 74.4
TWI32G1185 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 1.8e-24 115.5 80 73.8
Nn8g39361 Nelumbo nucifera HOM05D007420 ORTHO05D009353 2.3e-24 115.2 78 71.8
Cc06_g08970 Coffea canephora HOM05D007420 ORTHO05D009353 3.0e-24 114.8 78 74.4
AL2G27600 Arabidopsis lyrata HOM05D007420 ORTHO05D009353 5.2e-24 114.0 78 76.9
Sp5g23780 Schrenkiella parvula HOM05D007420 ORTHO05D009353 5.2e-24 114.0 78 76.9
CDE01G0426 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 6.8e-24 113.6 77 71.4
RcHm_v2.0_Chr2g0089401 Rosa chinensis HOM05D007420 ORTHO05D009353 8.8e-24 113.2 77 76.6
Eucgr.C01298 Eucalyptus grandis HOM05D007420 ORTHO05D009353 1.2e-23 112.8 68 80.9
Carub.0002s1522 Capsella rubella HOM05D007420 ORTHO05D009353 1.5e-23 112.5 78 75.6
CARHR061490 Cardamine hirsuta HOM05D007420 ORTHO05D009353 1.5e-23 112.5 78 75.6
Eucgr.L02717 Eucalyptus grandis HOM05D007420 ORTHO05D009353 1.5e-23 112.5 68 80.9
Thhalv10019233m.g Eutrema salsugineum HOM05D007420 ORTHO05D009353 1.5e-23 112.5 78 75.6
Glyma.05G010400 Glycine max HOM05D007420 ORTHO05D009353 1.5e-23 112.5 68 80.9
Nn2g11931 Nelumbo nucifera HOM05D007420 ORTHO05D009353 1.5e-23 112.5 78 71.8
AT1G68680 Arabidopsis thaliana HOM05D007420 ORTHO05D009353 2.0e-23 112.1 78 75.6
BolC6t38847H Brassica oleracea HOM05D007420 ORTHO05D009353 2.6e-23 111.7 78 74.4
TPR.G9078 Trifolium pratense HOM05D007420 ORTHO05D009353 2.6e-23 111.7 77 72.7
Gorai.010G066200 Gossypium raimondii HOM05D007420 ORTHO05D009353 5.7e-23 110.5 72 75.0
Eucgr.C01288 Eucalyptus grandis HOM05D007420 ORTHO05D009353 9.8e-23 109.8 69 76.8
MD15G1177800 Malus domestica HOM05D007420 ORTHO05D009353 9.8e-23 109.8 76 73.7
CSS0016223 Camellia sinensis var. sinensis HOM05D007420 ORTHO05D009353 1.7e-22 109.0 68 75.0
Thecc.09G120400 Theobroma cacao HOM05D007420 ORTHO05D009353 1.7e-22 109.0 68 77.9
CDE03G0079 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 2.2e-22 108.6 77 68.8
ClCG11G002810 Citrullus lanatus HOM05D007420 ORTHO05D009353 2.2e-22 108.6 78 71.8
Psat4g040560 Pisum sativum HOM05D007420 ORTHO05D009353 2.8e-22 108.2 77 70.1
SalBow1G2150 Salvia bowleyana HOM05D007420 ORTHO05D009353 4.9e-22 107.5 75 74.7
Migut.L01525 Erythranthe guttata HOM05D007420 ORTHO05D009353 6.3e-22 107.1 75 74.7
Actinidia22015 Actinidia chinensis HOM05D007420 ORTHO05D009353 1.1e-21 106.3 68 73.5
arahy.Tifrunner.gnm1.ann1.QR7ILI Arachis hypogaea HOM05D007420 ORTHO05D009353 1.4e-21 105.9 65 78.5
arahy.Tifrunner.gnm1.ann1.XPL4AE Arachis hypogaea HOM05D007420 ORTHO05D009353 1.8e-21 105.5 65 78.5
Dinv36572 Davidia involucrata HOM05D007420 ORTHO05D009353 1.8e-21 105.5 72 69.4
Duzib150G1214 Durio zibethinus HOM05D007420 ORTHO05D009353 3.1e-21 104.8 68 75.0
CsaV3_2G002630 Cucumis sativus L. HOM05D007420 ORTHO05D009353 4.1e-21 104.4 75 70.7
CAN.G1424.4 Capsicum annuum HOM05D007420 ORTHO05D009353 7.0e-21 103.6 78 69.2
Ciclev10009973m.g Citrus clementina HOM05D007420 ORTHO05D009353 7.0e-21 103.6 68 73.5
EL10Ac8g18588 Beta vulgaris HOM05D007420 ORTHO05D009353 1.2e-20 102.8 78 69.2
HanXRQChr03g0062071 Helianthus annuus HOM05D007420 ORTHO05D009353 2.0e-20 102.1 77 67.5
Prupe.7G237700 Prunus persica HOM05D007420 ORTHO05D009353 4.5e-20 100.9 75 68.0
vmacro20648 Vaccinium macrocarpon HOM05D007420 ORTHO05D009353 4.5e-20 100.9 68 72.1
Solyc07g005430.3 Solanum lycopersicum HOM05D007420 ORTHO05D009353 1.0e-19 99.8 71 69.0
ECA240G1805 Erigeron canadensis HOM05D007420 ORTHO05D009353 1.3e-19 99.4 69 71.0
PSO170G5167 Papaver somniferum HOM05D007420 ORTHO05D009353 1.3e-19 99.4 61 77.0
Sopen07g001360 Solanum pennellii HOM05D007420 ORTHO05D009353 1.3e-19 99.4 71 69.0
BcaB03g15439 Brassica carinata HOM05D007420 ORTHO05D009353 5.0e-19 97.4 67 76.1
C06p37440 Brassica napus HOM05D007420 ORTHO05D032647 5.0e-19 97.4 70 71.4
Sabra11G0015300 Salix brachista HOM05D007420 ORTHO05D009353 5.0e-19 97.4 70 70.0
BcaB03g15440 Brassica carinata HOM05D007420 ORTHO05D009353 6.6e-19 97.1 69 72.5
BcaC08g45947 Brassica carinata HOM05D007420 ORTHO05D009353 6.6e-19 97.1 69 72.5
SalBow6G6280 Salvia bowleyana HOM05D007420 ORTHO05D009353 6.6e-19 97.1 65 75.4
Aa31sc12G90 Aethionema arabicum HOM05D007420 ORTHO05D009353 8.6e-19 96.7 74 64.9
GSVIVG01015481001 Vitis vinifera HOM05D007420 ORTHO05D009353 8.6e-19 96.7 78 60.3
FvH4_1g03930 Fragaria vesca HOM05D007420 ORTHO05D009353 1.1e-18 96.3 72 68.1
Hma1.2p1_0018F.1_g012820 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 1.9e-18 95.5 68 67.6
A07p31870 Brassica napus HOM05D007420 ORTHO05D009353 9.5e-18 93.2 67 71.6
BraA07t30816Z Brassica rapa HOM05D007420 ORTHO05D009353 9.5e-18 93.2 68 70.6
MD02G1037600 Malus domestica HOM05D007420 ORTHO05D009353 1.2e-17 92.8 66 72.7
Sc14g0000270 Simmondsia chinensis HOM05D007420 ORTHO05D009353 1.6e-17 92.4 77 67.5
Hund09157 Selenicereus undatus HOM05D007420 ORTHO05D009353 2.1e-17 92.0 68 73.5
Lj4g0001906 Lotus japonicus HOM05D007420 ORTHO05D009353 2.8e-17 91.7 71 66.2
FAN23G1905 Fragaria x ananassa HOM05D007420 ORTHO05D009353 4.7e-17 90.9 67 71.6
FAN26G1322 Fragaria x ananassa HOM05D007420 ORTHO05D009353 4.7e-17 90.9 67 71.6
FAN28G1248 Fragaria x ananassa HOM05D007420 ORTHO05D009353 4.7e-17 90.9 67 71.6
MELO3C004528.2 Cucumis melo HOM05D007420 ORTHO05D009353 6.1e-17 90.5 69 69.6
FAN22G2307 Fragaria x ananassa HOM05D022909 ORTHO05D009353 8.0e-17 90.1 67 71.6
Zm00001eb283090 Zea mays HOM05D007420 ORTHO05D009353 8.0e-17 90.1 81 58.0
Pp3c11_6600 Physcomitrium patens HOM05D007420 ORTHO05D009353 1.0e-16 89.7 71 62.0
HPP92_024085 Vanilla planifolia HOM05D007420 ORTHO05D009353 1.8e-16 89.0 68 69.1
AUR62033448 Chenopodium quinoa HOM05D007420 ORTHO05D009353 3.0e-16 88.2 70 65.7
DCAR_014860 Daucus carota HOM05D007420 ORTHO05D009353 3.0e-16 88.2 67 64.2
Nitab4.5_0000750g0050 Nicotiana tabacum HOM05D007420 ORTHO05D009353 3.0e-16 88.2 68 66.2
Nitab4.5_0001193g0010 Nicotiana tabacum HOM05D007420 ORTHO05D009353 3.0e-16 88.2 68 66.2
Peaxi162Scf00361g00611 Petunia axillaris HOM05D007420 ORTHO05D009353 3.0e-16 88.2 64 67.2
unitig_85.g27256 Utricularia gibba HOM05D000953 ORTHO05D000231 4.0e-16 87.8 54 77.8
FAN19G3121 Fragaria x ananassa HOM05D007420 ORTHO05D009353 5.2e-16 87.4 60 71.7
Mapoly0048s0106 Marchantia polymorpha HOM05D007420 ORTHO05D009353 8.9e-16 86.7 81 56.8
AagrBONN_evm.TU.Sc2ySwM_362.2614 Anthoceros agrestis HOM05D007420 ORTHO05D009353 1.2e-15 86.3 63 68.3
SEGI_24866 Sequoiadendron giganteum HOM05D007420 ORTHO05D009353 2.6e-15 85.1 68 64.7
SHI28897 Sapria himalayana HOM05D007420 ORTHO05D009353 4.4e-15 84.3 72 58.3
Hma1.2p1_0018F.1_g012830 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 5.7e-15 84.0 55 69.1
PGSC0003DMG401011174 Solanum tuberosum HOM05D007420 ORTHO05D009353 2.3e-11 72.0 80 50.0
CBR_g3296 Chara braunii HOM05D007420 ORTHO05D009353 3.3e-10 68.2 76 48.7
Os05g0176600 Oryza sativa ssp. japonica HOM05D007420 ORTHO05D009353 3.3e-10 68.2 43 79.1
MBI01_g34140_MAGBIO Magnolia biondii HOM05D007420 ORTHO05D009353 7.3e-10 67.0 43 72.1
Eucgr.C01292 Eucalyptus grandis HOM05D007420 ORTHO05D009353 4.4e-07 57.8 30 90.0
Glyma.13G033951 Glycine max HOM05D007420 ORTHO05D009353 5.8e-07 57.4 36 75.0


User provided reference genes

Program Settings