Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G222100 Carya illinoinensis HOM05D007908 ORTHO05D009653 6.6e-56 220.3 101 100.0
CAN.G504.51 Capsicum annuum HOM05D001206 ORTHO05D002068 3.9e-24 114.8 96 49.0
TWI15G0389 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 2.8e-22 108.6 93 45.2
TWI73G0060 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 2.8e-22 108.6 93 45.2
TWI77G1008 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 2.8e-22 108.6 93 45.2
TWI18G0422 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 3.1e-21 105.1 93 43.0
Lj2C729G11 Lonicera japonica HOM05D001145 ORTHO05D009653 5.3e-21 104.4 93 48.4
CAN.G65.34 Capsicum annuum HOM05D000147 ORTHO05D009653 1.2e-20 103.2 94 46.8
Nn4g25076 Nelumbo nucifera HOM05D000414 ORTHO05D009653 4.5e-20 101.3 93 41.9
Ciclev10023357m.g Citrus clementina HOM05D007908 ORTHO05D009653 7.7e-20 100.5 88 47.7
Rhsim05G0128700 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.0e-19 100.1 93 44.1
Ciclev10013850m.g Citrus clementina HOM05D007908 ORTHO05D009653 3.8e-19 98.2 98 41.8
Rhsim06G0128500 Rhododendron simsii HOM05D007908 ORTHO05D009653 3.8e-19 98.2 93 41.9
TAR237G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.8e-19 98.2 100 45.0
CiPaw.11G050700 Carya illinoinensis HOM05D007908 ORTHO05D009653 8.5e-19 97.1 101 43.6
Nn7g36623 Nelumbo nucifera HOM05D000793 ORTHO05D001191 2.1e-17 92.4 88 39.8
Ciclev10010619m.g Citrus clementina HOM05D007908 ORTHO05D009653 2.7e-17 92.0 99 40.4
Ciclev10006991m.g Citrus clementina HOM05D007908 ORTHO05D009653 3.9e-16 88.2 96 40.6
VMungo1383G2888 Vigna mungo HOM05D007908 ORTHO05D009653 3.3e-15 85.1 94 38.3
Ciclev10010781m.g Citrus clementina HOM05D007908 ORTHO05D009653 5.7e-15 84.3 98 35.7
Ciclev10017758m.g Citrus clementina HOM05D007908 ORTHO05D009653 9.7e-15 83.6 94 36.2
TWI18G0694 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 9.7e-15 83.6 84 41.7
PGSC0003DMG400045810 Solanum tuberosum HOM05D007908 ORTHO05D009653 2.8e-14 82.0 92 38.0
Rhsim13G0148200 Rhododendron simsii HOM05D007908 ORTHO05D009653 4.8e-14 81.3 104 35.6
RhsimUnG0157400 Rhododendron simsii HOM05D007908 ORTHO05D009653 4.8e-14 81.3 104 35.6
Hma1.2p1_0303F.1_g118800 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 6.3e-14 80.9 95 34.7
Ciclev10006515m.g Citrus clementina HOM05D007908 ORTHO05D009653 8.2e-14 80.5 102 35.3
Rhsim05G0013600 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.4e-13 79.7 105 35.2
Hma1.2p1_1137F.1_g260710 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 1.3e-11 73.2 86 32.6
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 1.3e-11 73.2 82 39.0
RhsimUnG0057000 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.7e-11 72.8 106 33.0
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 3.8e-11 71.6 98 30.6
Rhsim11G0082000 Rhododendron simsii HOM05D008652 ORTHO05D010516 3.8e-11 71.6 77 37.7
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 8.5e-11 70.5 104 29.8
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 8.5e-11 70.5 104 29.8
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 8.5e-11 70.5 104 29.8
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 1.9e-10 69.3 99 31.3
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 1.9e-10 69.3 104 28.8
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-10 68.9 105 29.5
SHI31375 Sapria himalayana HOM05D007230 ORTHO05D004756 7.2e-10 67.4 104 27.9
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 9.4e-10 67.0 99 31.3
CSS0036773 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-09 66.6 82 34.1
MD02G1156200 Malus domestica HOM05D000002 ORTHO05D004756 1.6e-09 66.2 105 27.6
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.1e-09 65.9 83 32.5
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 2.7e-09 65.5 106 26.4
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-09 65.1 91 26.4
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-09 64.7 91 27.5
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.1e-09 64.3 91 26.4
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.1e-09 64.3 91 26.4
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.1e-09 64.3 91 26.4
CSS0017533 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.1e-09 64.3 91 26.4
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.1e-09 64.3 91 26.4
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.1e-09 64.3 91 26.4
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.1e-09 64.3 91 26.4
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.1e-09 64.3 91 26.4
Rhsim02G0117000 Rhododendron simsii HOM05D008231 ORTHO05D010646 6.1e-09 64.3 88 35.2
HPP92_021869 Vanilla planifolia HOM05D000002 ORTHO05D000047 6.1e-09 64.3 89 31.5
CSS0021536 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.0e-09 63.9 93 25.8
CSS0036738 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.0e-09 63.9 93 25.8
PSO754G0013 Papaver somniferum HOM05D007230 ORTHO05D004756 1.0e-08 63.5 106 25.5
CSS0012133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.4e-08 63.2 91 26.4
Potri.001G247404 Populus trichocarpa HOM05D000002 ORTHO05D000047 1.8e-08 62.8 83 34.9
AUR62032538 Chenopodium quinoa HOM05D000025 ORTHO05D000047 3.0e-08 62.0 89 29.2
Rhsim04G0123900 Rhododendron simsii HOM05D000182 ORTHO05D000112 3.0e-08 62.0 97 29.9
Oeu030440.3 Olea europaea HOM05D003391 ORTHO05D005563 4.0e-08 61.6 63 42.9
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 4.0e-08 61.6 119 28.6
Cpa.g.sc15.71 Carica papaya HOM05D000002 ORTHO05D000047 5.2e-08 61.2 89 28.1
Cpa.g.sc20.131 Carica papaya HOM05D004423 ORTHO05D000047 5.2e-08 61.2 84 32.1
Ciclev10003571m.g Citrus clementina HOM05D007908 ORTHO05D009653 5.2e-08 61.2 66 39.4
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 5.2e-08 61.2 83 33.7
HanXRQChr15g0479381 Helianthus annuus HOM05D000002 ORTHO05D000047 6.7e-08 60.8 83 37.3
SHI40782 Sapria himalayana HOM05D000002 ORTHO05D000001 6.7e-08 60.8 98 27.6
CiPaw.13G107300 Carya illinoinensis HOM05D000002 ORTHO05D000047 1.1e-07 60.1 84 34.5
VMungo0251G1086 Vigna mungo HOM05D000336 ORTHO05D002705 1.1e-07 60.1 93 26.9
Oeu025453.1 Olea europaea HOM05D000002 ORTHO05D000047 1.5e-07 59.7 83 30.1
CiPaw.01G100200 Carya illinoinensis HOM05D000002 ORTHO05D000047 2.0e-07 59.3 86 32.6
Hma1.2p1_0210F.1_g089480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-07 59.3 91 29.7
Rhsim01G0085300 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.6e-07 58.9 87 31.0
VMungo0720G1130 Vigna mungo HOM05D024021 ORTHO05D009653 2.6e-07 58.9 57 38.6
Oeu041660.4 Olea europaea HOM05D000002 ORTHO05D000047 3.3e-07 58.5 83 28.9
CSS0022731 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.4e-07 58.2 94 29.8
Hma1.2p1_0812F.1_g222220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.4e-07 58.2 91 29.7
Lj1g0008265 Lotus japonicus HOM05D000002 ORTHO05D000047 4.4e-07 58.2 91 23.1
Cpa.g.sc3.387 Carica papaya HOM05D000002 ORTHO05D000047 5.7e-07 57.8 84 27.4
Manes.09G020501 Manihot esculenta HOM05D007908 ORTHO05D009653 5.7e-07 57.8 93 35.5
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 5.7e-07 57.8 93 26.9
Oeu046725.1 Olea europaea HOM05D000002 ORTHO05D000047 5.7e-07 57.8 83 27.7
PSO478G2157 Papaver somniferum HOM05D007230 ORTHO05D004756 5.7e-07 57.8 109 26.6
PGR031G1334 Punica granatum HOM05D000002 ORTHO05D000047 5.7e-07 57.8 91 30.8
Rhsim02G0184000 Rhododendron simsii HOM05D010463 ORTHO05D017724 5.7e-07 57.8 87 29.9
CSS0010829 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.5e-07 57.4 79 31.6
Cpa.g.sc130.28 Carica papaya HOM05D000002 ORTHO05D000047 9.7e-07 57.0 84 28.6
Ciclev10026957m.g Citrus clementina HOM05D007908 ORTHO05D009653 9.7e-07 57.0 85 30.6
Eucgr.C01993 Eucalyptus grandis HOM05D000002 ORTHO05D000047 9.7e-07 57.0 89 29.2
Nn1g04145 Nelumbo nucifera HOM05D000002 ORTHO05D000047 9.7e-07 57.0 93 25.8
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 9.7e-07 57.0 86 31.4
Cpa.g.sc159.30 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-06 56.6 84 27.4
Duzib151G0310 Durio zibethinus HOM05D000002 ORTHO05D000047 1.3e-06 56.6 83 28.9
Lj3g0020805 Lotus japonicus HOM05D000002 ORTHO05D000047 1.3e-06 56.6 90 22.2
MBI14_g34239_MAGBIO Magnolia biondii HOM05D033994 ORTHO05D000047 1.3e-06 56.6 82 29.3
TWI56G0827 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 1.3e-06 56.6 90 26.7
CSS0015611 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.7e-06 56.2 85 28.2
CiPaw.04G038600 Carya illinoinensis HOM05D007908 ORTHO05D009653 1.7e-06 56.2 42 52.4
Duzib168G2283 Durio zibethinus HOM05D000002 ORTHO05D000047 1.7e-06 56.2 83 30.1
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 1.7e-06 56.2 84 32.1
PGSC0003DMG400015663 Solanum tuberosum HOM05D007908 ORTHO05D009653 1.7e-06 56.2 42 52.4
Actinidia05629 Actinidia chinensis HOM05D007230 ORTHO05D004756 2.2e-06 55.8 61 34.4
Duzib063G0004 Durio zibethinus HOM05D000002 ORTHO05D000047 2.8e-06 55.5 83 30.1
Duzib187G0946 Durio zibethinus HOM05D000002 ORTHO05D000047 2.8e-06 55.5 83 30.1
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 2.8e-06 55.5 94 25.5
Rhsim07G0134800 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.8e-06 55.5 95 30.5
AUR62040560 Chenopodium quinoa HOM05D000002 ORTHO05D000047 3.7e-06 55.1 76 27.6
Duzib093G0036 Durio zibethinus HOM05D004195 ORTHO05D005309 4.8e-06 54.7 83 30.1
Cpa.g.sc25.135 Carica papaya HOM05D000002 ORTHO05D000047 6.3e-06 54.3 84 28.6
Cpa.g.sc96.44 Carica papaya HOM05D000002 ORTHO05D000047 6.3e-06 54.3 84 26.2
Eucgr.H03782 Eucalyptus grandis HOM05D000002 ORTHO05D000047 6.3e-06 54.3 97 24.7
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.3e-06 54.3 79 30.4
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.3e-06 54.3 79 30.4
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.3e-06 54.3 79 30.4
SHI00533 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-06 54.3 84 25.0
Nn7g38028 Nelumbo nucifera HOM05D000002 ORTHO05D000047 8.2e-06 53.9 95 26.3
Rhsim05G0070200 Rhododendron simsii HOM05D000002 ORTHO05D000047 8.2e-06 53.9 95 29.5
SHI22439 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-06 53.9 84 25.0
SHI27562 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-06 53.9 84 25.0


User provided reference genes

Program Settings