Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G216500 Carya illinoinensis HOM05D007811 ORTHO05D009888 0.0e+00 1298.1 636 100.0
QL02p062715 Quercus lobata HOM05D007811 ORTHO05D009888 2.6e-267 925.2 637 72.8
Haze_25911 Corylus avellana HOM05D007811 ORTHO05D009888 7.0e-260 900.6 639 72.6
Cfa003088 Carpinus fangiana HOM05D007811 ORTHO05D009888 1.9e-241 839.3 638 67.6
Atru.chr7.1587 Acer truncatum HOM05D007811 ORTHO05D009888 7.1e-188 661.4 635 54.8
Prupe.7G209900 Prunus persica HOM05D007811 ORTHO05D009888 6.9e-183 644.8 635 53.4
Duzib168G1142 Durio zibethinus HOM05D007811 ORTHO05D009888 2.6e-182 642.9 636 53.1
TAR383G0833 Trochodendron aralioides HOM05D007811 ORTHO05D009888 4.5e-182 642.1 640 52.8
Actinidia39718 Actinidia chinensis HOM05D007811 ORTHO05D009888 5.5e-180 635.2 639 52.3
Dinv42318 Davidia involucrata HOM05D007811 ORTHO05D009888 1.9e-177 626.7 568 55.5
MD02G1079300 Malus domestica HOM05D007811 ORTHO05D009888 5.6e-177 625.2 625 53.1
Ciclev10010815m.g Citrus clementina HOM05D007811 ORTHO05D009888 8.1e-176 621.3 641 50.7
TWI34G0321 Tripterygium wilfordii HOM05D007811 ORTHO05D009888 2.6e-174 616.3 639 52.4
FAN19G2727 Fragaria x ananassa HOM05D007811 ORTHO05D009888 1.3e-173 614.0 629 52.6
RcHm_v2.0_Chr2g0093321 Rosa chinensis HOM05D007811 ORTHO05D009888 1.9e-172 610.1 633 51.7
FvH4_1g07420 Fragaria vesca HOM05D007811 ORTHO05D009888 3.2e-172 609.4 629 52.3
GSVIVG01015202001 Vitis vinifera HOM05D007811 ORTHO05D009888 7.1e-172 608.2 623 52.5
Potri.006G144600 Populus trichocarpa HOM05D007811 ORTHO05D009888 2.3e-170 603.2 636 52.0
FAN26G0113 Fragaria x ananassa HOM05D007811 ORTHO05D009888 2.5e-169 599.7 629 51.8
FAN23G0562 Fragaria x ananassa HOM05D007811 ORTHO05D009888 7.4e-169 598.2 629 52.1
Thecc.09G089600 Theobroma cacao HOM05D007811 ORTHO05D009888 2.4e-167 593.2 580 54.5
Gohir.A07G011000 Gossypium hirsutum HOM05D007811 ORTHO05D009888 6.9e-167 591.7 635 50.4
Gohir.D07G011150 Gossypium hirsutum HOM05D007811 ORTHO05D009888 2.6e-166 589.7 634 50.2
COL.COLO4_18202 Corchorus olitorius HOM05D007811 ORTHO05D009888 3.4e-166 589.3 638 50.0
Gorai.001G011700 Gossypium raimondii HOM05D007811 ORTHO05D009888 5.9e-166 588.6 634 50.2
FAN28G1627 Fragaria x ananassa HOM05D007811 ORTHO05D009888 1.9e-164 583.6 629 51.4
Sabra06G0113100 Salix brachista HOM05D007811 ORTHO05D009888 9.3e-164 581.3 636 50.2
Sabra06G0114400 Salix brachista HOM05D007811 ORTHO05D009888 9.3e-164 581.3 636 50.2
FAN26G2623 Fragaria x ananassa HOM05D007811 ORTHO05D009888 1.1e-161 574.3 619 51.5
Manes.03G033600 Manihot esculenta HOM05D007811 ORTHO05D009888 8.5e-157 558.1 636 48.7
CANSAT56G0268 Cannabis sativa HOM05D007811 ORTHO05D009888 1.5e-153 547.4 634 47.9
Hma1.2p1_0798F.1_g219820 Hydrangea macrophylla HOM05D007811 ORTHO05D009888 2.9e-149 533.1 622 47.1
Hma1.2p1_2664F.1_g326430 Hydrangea macrophylla HOM05D007811 ORTHO05D009888 9.4e-140 501.5 594 46.8
DCAR_032238 Daucus carota HOM05D007811 ORTHO05D009888 2.1e-139 500.4 644 44.6
PGR102G3061 Punica granatum HOM05D007811 ORTHO05D009888 3.0e-138 496.5 641 44.6
Aqoxy7G04046 Aquilegia oxysepala HOM05D007811 ORTHO05D009888 7.5e-137 491.9 638 42.8
PGSC0003DMG400009724 Solanum tuberosum HOM05D007811 ORTHO05D009888 8.2e-136 488.4 630 41.3
Sopen07g018370 Solanum pennellii HOM05D007811 ORTHO05D009888 1.2e-134 484.6 630 41.0
THA.LOC104817755 Tarenaya hassleriana HOM05D007811 ORTHO05D009888 1.6e-134 484.2 637 44.1
MSTRG.19514 Avicennia marina HOM05D007811 ORTHO05D009888 2.7e-134 483.4 659 40.8
CANSAT56G0922 Cannabis sativa HOM05D007811 ORTHO05D009888 1.0e-133 481.5 634 44.5
Solyc07g038100.3 Solanum lycopersicum HOM05D007811 ORTHO05D009888 5.0e-133 479.2 630 40.3
Sc18g0001990 Simmondsia chinensis HOM05D007811 ORTHO05D009888 2.4e-127 460.3 645 43.3
Nitab4.5_0005634g0040 Nicotiana tabacum HOM05D007811 ORTHO05D009888 5.4e-127 459.1 631 39.6
Nitab4.5_0004978g0030 Nicotiana tabacum HOM05D007811 ORTHO05D009888 5.9e-126 455.7 630 39.7
SalBow6G0727 Salvia bowleyana HOM05D007811 ORTHO05D009888 5.0e-125 452.6 633 39.5
Thhalv10006501m.g Eutrema salsugineum HOM05D007811 ORTHO05D009888 6.8e-122 442.2 632 41.6
PSO210G1027 Papaver somniferum HOM05D007811 ORTHO05D009888 3.4e-121 439.9 637 40.5
Carub.0005s2705 Capsella rubella HOM05D007811 ORTHO05D009888 9.8e-121 438.3 646 41.3
CARHR170630 Cardamine hirsuta HOM05D007811 ORTHO05D009888 3.7e-120 436.4 639 40.7
HanXRQChr12g0354871 Helianthus annuus HOM05D007811 ORTHO05D009888 1.1e-119 434.9 634 39.1
Peaxi162Scf01121g00111 Petunia axillaris HOM05D007811 ORTHO05D009888 1.1e-119 434.9 670 37.8
PSO210G6552 Papaver somniferum HOM05D007811 ORTHO05D009888 3.1e-119 433.3 637 39.9
SGA_v2.0_scaffold10G05228 Striga asiatica HOM05D007811 ORTHO05D009888 2.9e-117 426.8 641 37.9
BcaB02g08177 Brassica carinata HOM05D007811 ORTHO05D009888 1.2e-115 421.4 637 40.2
BraA04t15894Z Brassica rapa HOM05D007811 ORTHO05D009888 6.1e-115 419.1 642 39.9
Migut.J00617 Erythranthe guttata HOM05D007811 ORTHO05D009888 1.0e-114 418.3 576 39.2
Lsat_1_v5_gn_5_142361 Lactuca sativa HOM05D007811 ORTHO05D009888 4.0e-114 416.4 636 39.3
AL5G42530 Arabidopsis lyrata HOM05D007811 ORTHO05D009888 8.9e-114 415.2 640 40.3
AT3G60310 Arabidopsis thaliana HOM05D007811 ORTHO05D009888 4.9e-112 409.5 633 40.3
BcaC02g10146 Brassica carinata HOM05D007811 ORTHO05D009888 1.2e-110 404.8 637 38.8
BolC4t24783H Brassica oleracea HOM05D007811 ORTHO05D009888 1.2e-110 404.8 637 38.9
C04p32330 Brassica napus HOM05D007811 ORTHO05D009888 3.0e-109 400.2 637 38.5
A04p01700 Brassica napus HOM05D007811 ORTHO05D009888 1.6e-107 394.4 655 38.5
ECA234G0321 Erigeron canadensis HOM05D007811 ORTHO05D009888 1.6e-107 394.4 605 38.5
Nn6g35473 Nelumbo nucifera HOM05D007811 ORTHO05D009888 2.1e-107 394.0 640 37.3
Cpa.g.sc93.35 Carica papaya HOM05D007811 ORTHO05D009888 2.0e-102 377.5 442 46.8
Eucgr.C03899 Eucalyptus grandis HOM05D007811 ORTHO05D009888 5.6e-92 342.8 437 43.5
ATR0749G017 Amborella trichopoda HOM05D007811 ORTHO05D009888 1.0e-85 322.0 699 32.0
HPP92_003971 Vanilla planifolia HOM05D007811 ORTHO05D009888 4.0e-82 310.1 658 31.2
Cc00_g27490 Coffea canephora HOM05D007811 ORTHO05D009888 7.8e-78 295.8 334 46.4
Oeu042653.6 Olea europaea HOM05D007811 ORTHO05D009888 5.6e-76 289.7 639 32.9
Zm00001eb376990 Zea mays HOM05D007811 ORTHO05D009888 1.4e-74 285.0 628 33.4
MBI01_g21120_MAGBIO Magnolia biondii HOM05D007811 ORTHO05D009888 4.2e-71 273.5 462 36.6
Cfa003090 Carpinus fangiana HOM05D007811 ORTHO05D009888 1.1e-63 248.8 202 67.8
DCAR_028591 Daucus carota HOM05D007811 ORTHO05D009888 4.9e-56 223.4 546 31.1
Cpa.g.sc93.36 Carica papaya HOM05D007811 ORTHO05D009888 3.2e-55 220.7 201 52.7
Haze_25909 Corylus avellana HOM05D007811 ORTHO05D009888 1.9e-47 194.9 147 66.0
SEGI_03446 Sequoiadendron giganteum HOM05D007811 ORTHO05D009888 5.9e-41 173.3 377 30.8
SEGI_10589 Sequoiadendron giganteum HOM05D007811 ORTHO05D009888 2.8e-35 154.5 592 25.5
CAN.G720.2 Capsicum annuum HOM05D007811 ORTHO05D009888 9.1e-34 149.4 212 34.4
CDE04G1243 Ceratophyllum demersum HOM05D000793 ORTHO05D000783 3.3e-28 131.0 453 28.0
CAN.G720.1 Capsicum annuum HOM05D007811 ORTHO05D009888 2.4e-18 98.2 125 43.2
AagrBONN_evm.TU.Sc2ySwM_344.5247 Anthoceros agrestis HOM05D007811 ORTHO05D009888 4.1e-18 97.4 285 27.7


User provided reference genes

Program Settings