Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G216000 Carya illinoinensis HOM05D000003 ORTHO05D024912 2.1e-149 532.3 273 100.0
QL02p095718 Quercus lobata HOM05D000003 ORTHO05D000126 3.3e-09 66.6 75 45.3
QL07p017701 Quercus lobata HOM05D000003 ORTHO05D000126 4.3e-09 66.2 75 41.3
Haze_23493 Corylus avellana HOM05D023551 ORTHO05D024912 7.4e-09 65.5 61 47.5
Hma1.2p1_0167F.1_g073680 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 9.7e-09 65.1 70 42.9
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.2e-08 63.9 67 44.8
Rhsim07G0115800 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.2e-08 63.9 67 44.8
QL11p036841 Quercus lobata HOM05D000003 ORTHO05D000126 2.8e-08 63.5 75 41.3
QL93p1863_0020 Quercus lobata HOM05D000003 ORTHO05D000126 2.8e-08 63.5 66 42.4
Haze_09938 Corylus avellana HOM05D000003 ORTHO05D000126 3.7e-08 63.2 66 37.9
QL05p073923 Quercus lobata HOM05D000003 ORTHO05D000006 3.7e-08 63.2 73 43.8
SGA_v2.0_scaffold19G08685 Striga asiatica HOM05D017992 ORTHO05D000126 4.8e-08 62.8 121 35.5
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 6.3e-08 62.4 159 32.1
QL04p005346 Quercus lobata HOM05D000003 ORTHO05D000126 8.2e-08 62.0 73 42.5
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 8.2e-08 62.0 93 35.5
QL03p018940 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-07 61.6 80 40.0
QL11p021674 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-07 61.6 67 43.3
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-07 61.2 87 36.8
Dinv03310 Davidia involucrata HOM05D000003 ORTHO05D000126 1.8e-07 60.8 74 41.9
Dinv19479 Davidia involucrata HOM05D000077 ORTHO05D000339 3.1e-07 60.1 67 47.8
Dinv32967 Davidia involucrata HOM05D000280 ORTHO05D003998 3.1e-07 60.1 67 47.8
Nitab4.5_0013082g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.1e-07 59.7 60 41.7
QL01p013473 Quercus lobata HOM05D000003 ORTHO05D000126 4.1e-07 59.7 100 35.0
Cpa.g.sc55.183 Carica papaya HOM05D000003 ORTHO05D000126 5.3e-07 59.3 203 29.6
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 6.9e-07 58.9 75 41.3
QL11p056942 Quercus lobata HOM05D000003 ORTHO05D000126 9.0e-07 58.5 69 43.5
QL01p039135 Quercus lobata HOM05D000003 ORTHO05D000006 1.2e-06 58.2 99 38.4
ClCG04G003590 Citrullus lanatus HOM05D000003 ORTHO05D000126 1.5e-06 57.8 99 34.3
Haze_05455 Corylus avellana HOM05D000003 ORTHO05D000126 1.5e-06 57.8 203 25.1
QL01p032615 Quercus lobata HOM05D000062 ORTHO05D000043 2.0e-06 57.4 66 42.4
QL03p062957 Quercus lobata HOM05D000003 ORTHO05D000126 2.0e-06 57.4 62 45.2
QL04p012421 Quercus lobata HOM05D000003 ORTHO05D000126 2.0e-06 57.4 181 31.5
QL06p009410 Quercus lobata HOM05D000003 ORTHO05D000126 2.0e-06 57.4 66 43.9
QL02p010000 Quercus lobata HOM05D000132 ORTHO05D000058 2.6e-06 57.0 66 42.4
QL04p005607 Quercus lobata HOM05D000003 ORTHO05D000126 2.6e-06 57.0 67 43.3
QL11p033897 Quercus lobata HOM05D000003 ORTHO05D000126 3.4e-06 56.6 73 39.7
Nitab4.5_0004512g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.5e-06 56.2 88 34.1
Haze_03036 Corylus avellana HOM05D021515 ORTHO05D016203 5.9e-06 55.8 128 32.0
Hma1.2p1_1456F.1_g284630 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 5.9e-06 55.8 42 50.0
Nitab4.5_0003032g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 5.9e-06 55.8 102 36.3
TWI34G0137 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 7.7e-06 55.5 215 25.6
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.0e-05 55.1 66 42.4
AUR62028325 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.0e-05 55.1 65 43.1
Haze_15907 Corylus avellana HOM05D023551 ORTHO05D024912 1.0e-05 55.1 52 44.2
QL02p008707 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-05 55.1 62 41.9
QL03p060676 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-05 55.1 99 37.4
QL03p061166 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-05 55.1 98 37.8
QL05p063585 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-05 55.1 97 30.9
QL08p005297 Quercus lobata HOM05D000003 ORTHO05D000006 1.0e-05 55.1 97 30.9
SGA_v2.0_scaffold9G04785 Striga asiatica HOM05D017409 ORTHO05D000126 1.0e-05 55.1 205 25.9


User provided reference genes

Program Settings