Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G215900 Carya illinoinensis HOM05D007990 ORTHO05D009984 3.6e-100 368.2 186 100.0
TWI32G0510 Tripterygium wilfordii HOM05D007990 ORTHO05D009984 2.1e-31 139.8 170 50.6
QL02p062610 Quercus lobata HOM05D007990 ORTHO05D009984 4.0e-30 135.6 191 50.3
Duzib168G0718 Durio zibethinus HOM05D007990 ORTHO05D009984 2.6e-29 132.9 171 48.5
Thecc.09G089300 Theobroma cacao HOM05D007990 ORTHO05D009984 5.7e-29 131.7 168 48.8
TWI63G1466 Tripterygium wilfordii HOM05D007990 ORTHO05D009984 2.2e-28 129.8 184 44.0
Haze_25914 Corylus avellana HOM05D007990 ORTHO05D009984 2.7e-26 122.9 191 45.5
Hma1.2p1_0798F.1_g219830 Hydrangea macrophylla HOM05D007990 ORTHO05D009984 4.2e-24 115.5 206 41.7
CsaV3_2G001460 Cucumis sativus L. HOM05D007990 ORTHO05D009984 5.5e-24 115.2 184 39.1
MELO3C004625.2 Cucumis melo HOM05D007990 ORTHO05D009984 7.2e-24 114.8 179 42.5
Ciclev10010560m.g Citrus clementina HOM05D007990 ORTHO05D009984 9.5e-24 114.4 166 42.8
Gohir.D07G011200 Gossypium hirsutum HOM05D007990 ORTHO05D009984 9.5e-24 114.4 185 40.5
Gorai.001G011900 Gossypium raimondii HOM05D007990 ORTHO05D009984 9.5e-24 114.4 185 40.5
ClCG11G001750 Citrullus lanatus HOM05D007990 ORTHO05D009984 1.6e-23 113.6 170 43.5
Gohir.A07G011300 Gossypium hirsutum HOM05D007990 ORTHO05D009984 2.8e-23 112.8 164 43.9
Gohir.A06G072600 Gossypium hirsutum HOM05D007990 ORTHO05D009984 6.1e-23 111.7 182 45.1
COL.COLO4_18199 Corchorus olitorius HOM05D007990 ORTHO05D009984 1.4e-22 110.5 163 46.0
Cfa003085 Carpinus fangiana HOM05D007990 ORTHO05D009984 1.5e-21 107.1 189 41.8
Dinv36767 Davidia involucrata HOM05D007990 ORTHO05D009984 3.4e-21 105.9 177 40.7
Manes.03G033800 Manihot esculenta HOM05D007990 ORTHO05D009984 2.8e-20 102.8 175 38.9
Gorai.010G083000 Gossypium raimondii HOM05D007990 ORTHO05D009984 6.3e-20 101.7 144 50.7
Atru.chr7.1590 Acer truncatum HOM05D007990 ORTHO05D009984 8.3e-20 101.3 168 44.6
Actinidia29902 Actinidia chinensis HOM05D007990 ORTHO05D009984 3.1e-19 99.4 160 41.2
Gohir.D06G071200 Gossypium hirsutum HOM05D007990 ORTHO05D009984 3.1e-19 99.4 144 49.3
Sed0000223 Sechium edule HOM05D007990 ORTHO05D009984 1.2e-18 97.4 156 42.3
Cc06_g11410 Coffea canephora HOM05D007990 ORTHO05D009984 4.5e-18 95.5 112 51.8
Nitab4.5_0004526g0040 Nicotiana tabacum HOM05D007990 ORTHO05D009984 2.3e-17 93.2 187 36.4
Nitab4.5_0006552g0010 Nicotiana tabacum HOM05D007990 ORTHO05D009984 3.9e-17 92.4 176 38.1
Rhsim03G0232200 Rhododendron simsii HOM05D007990 ORTHO05D009984 4.3e-16 89.0 196 39.8
Hma1.2p1_2664F.1_g326450 Hydrangea macrophylla HOM05D007990 ORTHO05D009984 5.6e-16 88.6 132 45.5
A03p13100 Brassica napus HOM05D007990 ORTHO05D009984 1.2e-15 87.4 151 37.1
BraA03t10620Z Brassica rapa HOM05D007990 ORTHO05D009984 1.2e-15 87.4 151 37.1
C09p48510 Brassica napus HOM05D007990 ORTHO05D009984 1.6e-15 87.0 151 35.8
BcaB08g36048 Brassica carinata HOM05D007990 ORTHO05D009984 2.1e-15 86.7 151 37.7
BolC3t13974H Brassica oleracea HOM05D007990 ORTHO05D009984 2.1e-15 86.7 151 37.1
Sp6g18600 Schrenkiella parvula HOM05D007990 ORTHO05D009984 3.6e-15 85.9 189 36.0
AL8G32730 Arabidopsis lyrata HOM05D007990 ORTHO05D009984 6.1e-15 85.1 118 44.9
Oeu041221.1 Olea europaea HOM05D007990 ORTHO05D009984 6.1e-15 85.1 126 44.4
BcaB01g04425 Brassica carinata HOM05D007990 ORTHO05D009984 8.0e-15 84.7 151 37.1
Lsat_1_v5_gn_5_142501 Lactuca sativa HOM05D007990 ORTHO05D009984 1.8e-14 83.6 168 36.9
THA.LOC104813262 Tarenaya hassleriana HOM05D007990 ORTHO05D009984 1.8e-14 83.6 192 38.0
BcaC04g20046 Brassica carinata HOM05D007990 ORTHO05D009984 2.3e-14 83.2 151 34.4
BolC9t57693H Brassica oleracea HOM05D007990 ORTHO05D009984 2.3e-14 83.2 151 34.4
Thhalv10015576m.g Eutrema salsugineum HOM05D007990 ORTHO05D009984 2.3e-14 83.2 151 37.1
AT5G56880 Arabidopsis thaliana HOM05D007990 ORTHO05D009984 3.1e-14 82.8 153 37.3
C03p15320 Brassica napus HOM05D007990 ORTHO05D009984 4.0e-14 82.4 151 35.1
CARHR270630 Cardamine hirsuta HOM05D007990 ORTHO05D009984 4.0e-14 82.4 152 38.2
CANSAT56G4255 Cannabis sativa HOM05D007990 ORTHO05D009984 6.8e-14 81.6 155 41.3
FvH4_1g07430 Fragaria vesca HOM05D023113 ORTHO05D009984 6.8e-14 81.6 153 40.5
FAN19G1041 Fragaria x ananassa HOM05D023113 ORTHO05D009984 6.8e-14 81.6 153 40.5
Lj7P676T16 Lonicera japonica HOM05D007990 ORTHO05D009984 6.8e-14 81.6 220 33.2
HanXRQChr10g0319321 Helianthus annuus HOM05D007990 ORTHO05D009984 8.9e-14 81.3 168 34.5
Prupe.7G209700 Prunus persica HOM05D007990 ORTHO05D009984 8.9e-14 81.3 164 40.9
SGA_v2.0_scaffold62G21609 Striga asiatica HOM05D007990 ORTHO05D009984 8.9e-14 81.3 88 48.9
FAN26G2796 Fragaria x ananassa HOM05D023113 ORTHO05D009984 1.2e-13 80.9 153 40.5
FAN28G0129 Fragaria x ananassa HOM05D023113 ORTHO05D009984 1.2e-13 80.9 153 40.5
DCAR_028590 Daucus carota HOM05D007990 ORTHO05D009984 2.0e-13 80.1 161 39.8
Migut.J00619 Erythranthe guttata HOM05D007990 ORTHO05D009984 3.4e-13 79.3 106 50.9
Ah.09g228280 Amaranthus hybridus HOM05D007990 ORTHO05D009984 7.5e-13 78.2 88 46.6
FAN26G0609 Fragaria x ananassa HOM05D023113 ORTHO05D009984 9.8e-13 77.8 153 39.9
AUR62027510 Chenopodium quinoa HOM05D007990 ORTHO05D009984 8.3e-12 74.7 113 45.1
Nn8g38865 Nelumbo nucifera HOM05D018816 ORTHO05D011230 8.3e-12 74.7 143 39.9
Carub.0008s1734 Capsella rubella HOM05D007990 ORTHO05D009984 1.1e-11 74.3 153 33.3
C09p48480 Brassica napus HOM05D007990 ORTHO05D009984 1.4e-11 73.9 108 39.8
DCAR_032237 Daucus carota HOM05D007990 ORTHO05D009984 1.9e-11 73.6 183 37.2
THA.LOC104817754 Tarenaya hassleriana HOM05D007990 ORTHO05D009984 1.9e-11 73.6 53 69.8
TAR383G0124 Trochodendron aralioides HOM05D009710 ORTHO05D011230 1.9e-11 73.6 194 33.5
BcaC04g20048 Brassica carinata HOM05D007990 ORTHO05D009984 3.2e-11 72.8 84 42.9
BolC9t57691H Brassica oleracea HOM05D007990 ORTHO05D009984 3.2e-11 72.8 84 42.9
Sc18g0001980 Simmondsia chinensis HOM05D007990 ORTHO05D009984 5.4e-11 72.0 117 43.6
Lj4g0018248 Lotus japonicus HOM05D007990 ORTHO05D009984 2.0e-10 70.1 54 64.8
MD02G1079500 Malus domestica HOM05D007990 ORTHO05D009984 6.0e-10 68.6 152 36.2
Medtr4g126310 Medicago truncatula HOM05D007990 ORTHO05D009984 1.0e-09 67.8 91 46.2
TPR.G9474 Trifolium pratense HOM05D000085 ORTHO05D001460 1.0e-09 67.8 86 47.7
BraA10t43507Z Brassica rapa HOM05D007990 ORTHO05D009984 3.9e-09 65.9 113 41.6
Ca_21278_v3 Cicer arietinum L. HOM05D007990 ORTHO05D009984 3.9e-09 65.9 81 50.6
ECA234G1790 Erigeron canadensis HOM05D007990 ORTHO05D009984 3.9e-09 65.9 174 33.3
HanXRQChr12g0354891 Helianthus annuus HOM05D007990 ORTHO05D009984 6.6e-09 65.1 108 38.0
MD15G1207000 Malus domestica HOM05D007990 ORTHO05D009984 7.3e-08 61.6 216 29.6
PGR102G1891 Punica granatum HOM05D007990 ORTHO05D009984 2.8e-07 59.7 173 38.7
Nn6g35479 Nelumbo nucifera HOM05D018816 ORTHO05D011230 6.2e-07 58.5 146 35.6


User provided reference genes

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