Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.0e-108 396.7 194 100.0
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 5.0e-52 208.4 189 61.4
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 5.2e-49 198.4 193 58.5
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 6.4e-47 191.4 195 60.0
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 5.2e-41 171.8 199 51.3
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 4.6e-37 158.7 186 47.8
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 1.1e-35 154.1 192 48.4
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 1.8e-33 146.7 190 48.9
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 5.2e-33 145.2 188 46.8
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 8.9e-33 144.4 188 45.7
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.2e-32 144.1 188 46.8
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.0e-32 143.3 188 45.2
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 2.6e-32 142.9 189 44.4
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 1.3e-31 140.6 201 47.3
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 2.2e-31 139.8 192 46.9
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.9e-31 139.4 189 46.0
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 3.7e-31 139.0 194 44.3
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 4.9e-31 138.7 192 45.3
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 7.1e-30 134.8 186 46.8
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 7.1e-30 134.8 189 43.9
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 1.6e-29 133.7 198 47.0
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 2.1e-29 133.3 191 42.9
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 6.0e-29 131.7 220 40.0
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 3.9e-28 129.0 208 38.9
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 7.3e-27 124.8 187 43.3
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 9.5e-27 124.4 201 41.8
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.2e-26 124.0 195 42.1
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 1.2e-26 124.0 191 44.0
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 2.1e-26 123.2 201 41.3
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 2.8e-26 122.9 191 42.4
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 4.7e-26 122.1 185 43.8
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 6.2e-26 121.7 206 41.7
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 6.2e-26 121.7 218 38.5
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 1.1e-25 120.9 192 43.2
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.8e-25 120.2 208 39.9
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 3.1e-25 119.4 196 42.3
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 5.2e-25 118.6 200 42.5
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 8.9e-25 117.9 189 41.8
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 8.9e-25 117.9 199 41.2
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 8.9e-25 117.9 189 42.9
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.5e-24 117.1 187 41.7
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.6e-24 116.3 190 43.7
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 3.4e-24 115.9 187 41.2
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 7.6e-24 114.8 193 42.0
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 7.6e-24 114.8 197 40.6
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 2.2e-23 113.2 203 41.4
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 2.9e-23 112.8 196 41.3
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 2.9e-23 112.8 189 38.6
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 2.9e-23 112.8 189 38.6
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 3.8e-23 112.5 192 39.1
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 3.8e-23 112.5 192 39.1
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 3.8e-23 112.5 196 41.8
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 3.8e-23 112.5 196 41.8
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 3.8e-23 112.5 187 45.5
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 6.4e-23 111.7 201 39.3
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 1.1e-22 110.9 197 37.1
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 1.1e-22 110.9 199 43.7
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 1.4e-22 110.5 207 37.7
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 1.9e-22 110.2 185 42.2
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 3.2e-22 109.4 195 39.0
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 3.2e-22 109.4 201 38.3
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 4.1e-22 109.0 199 36.7
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 4.1e-22 109.0 195 40.0
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 5.4e-22 108.6 197 38.1
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 5.4e-22 108.6 197 39.6
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 7.1e-22 108.2 193 37.3
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 7.1e-22 108.2 205 38.0
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 9.2e-22 107.8 188 38.8
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 9.2e-22 107.8 197 38.1
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 9.2e-22 107.8 203 37.4
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 9.2e-22 107.8 195 41.5
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 2.1e-21 106.7 186 39.2
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 4.6e-21 105.5 189 36.5
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 4.6e-21 105.5 205 38.0
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 4.6e-21 105.5 189 36.5
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 4.6e-21 105.5 205 38.0
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 6.0e-21 105.1 204 37.3
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 6.0e-21 105.1 200 40.0
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 7.8e-21 104.8 190 41.1
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 1.0e-20 104.4 201 38.3
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 1.3e-20 104.0 192 38.0
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 1.3e-20 104.0 191 38.7
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 1.7e-20 103.6 212 38.2
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 1.7e-20 103.6 200 38.5
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 3.0e-20 102.8 188 42.6
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 3.9e-20 102.4 184 42.9
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 3.9e-20 102.4 191 36.6
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 8.6e-20 101.3 198 39.4
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 8.6e-20 101.3 205 35.1
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 1.1e-19 100.9 201 37.8
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.5e-19 100.5 192 36.5
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 1.5e-19 100.5 195 39.0
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 4.3e-19 99.0 224 36.2
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 5.6e-19 98.6 214 35.5
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 5.6e-19 98.6 201 38.3
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 7.3e-19 98.2 200 37.5
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 9.6e-19 97.8 189 41.3
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 1.2e-18 97.4 195 35.9
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 1.6e-18 97.1 199 34.7
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.6e-18 97.1 187 35.8
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 2.8e-18 96.3 198 41.9
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 8.1e-18 94.7 184 34.2
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 8.1e-18 94.7 193 39.4
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 1.1e-17 94.4 184 39.1
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.4e-17 94.0 191 40.3
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 5.2e-17 92.0 195 34.4
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 5.2e-17 92.0 186 37.6
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 5.2e-17 92.0 189 37.0
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 4.4e-16 89.0 194 36.1
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 5.8e-16 88.6 190 40.0
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 1.7e-15 87.0 202 39.6
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 1.7e-15 87.0 214 32.7
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 4.9e-15 85.5 186 39.2
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.2e-13 80.9 179 37.4
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 7.8e-13 78.2 188 36.2
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 7.8e-13 78.2 186 36.6
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 1.0e-12 77.8 189 36.5
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 3.0e-12 76.3 204 34.8
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 4.8e-10 68.9 199 32.2
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 1.8e-09 67.0 87 42.5
PSO448G0001 Papaver somniferum HOM05D005897 ORTHO05D007128 2.4e-09 66.6 198 29.3
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 3.1e-09 66.2 183 31.7
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 3.4e-08 62.8 187 31.0
MBI19_g18108_MAGBIO Magnolia biondii HOM05D005897 ORTHO05D007128 7.6e-08 61.6 216 28.2
Actinidia38489 Actinidia chinensis HOM05D005897 ORTHO05D007128 3.2e-06 56.2 113 36.3
ATR0681G234 Amborella trichopoda HOM05D005897 ORTHO05D007128 9.3e-06 54.7 232 26.3
vmacro15871 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 9.3e-06 54.7 43 60.5


User provided reference genes

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