Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.03G189100 Carya illinoinensis HOM05D035806 ORTHO05D011736 3.4e-174 615.1 371 100.0
QL08p044079 Quercus lobata HOM05D035806 ORTHO05D011736 2.1e-70 270.4 370 54.6
Haze_13494 Corylus avellana HOM05D035806 ORTHO05D011736 1.8e-37 161.0 338 49.1
Thecc.01G161600 Theobroma cacao HOM05D015707 ORTHO05D011736 2.7e-22 110.5 346 35.3
Duzib187G0630 Durio zibethinus HOM05D015707 ORTHO05D011736 6.7e-21 105.9 354 34.5
Atru.chr6.2095 Acer truncatum HOM05D015707 ORTHO05D011736 8.2e-19 99.0 313 36.7
Prupe.3G172400 Prunus persica HOM05D015330 ORTHO05D011736 1.2e-17 95.1 356 30.1
RcHm_v2.0_Chr2g0151471 Rosa chinensis HOM05D015330 ORTHO05D011736 1.1e-15 88.6 265 33.2
Potri.005G201300 Populus trichocarpa HOM05D019188 ORTHO05D011736 3.2e-15 87.0 275 34.9
Manes.02G084100 Manihot esculenta HOM05D019188 ORTHO05D011736 7.9e-14 82.4 271 33.2
Gohir.A11G060400 Gossypium hirsutum HOM05D015707 ORTHO05D011736 4.4e-12 76.6 196 36.2
FAN02G0771 Fragaria x ananassa HOM05D015330 ORTHO05D011736 9.7e-12 75.5 279 34.1
FvH4_6g38210 Fragaria vesca HOM05D015330 ORTHO05D011736 1.4e-10 71.6 279 34.8
Potri.002G060300 Populus trichocarpa HOM05D019188 ORTHO05D011736 1.8e-10 71.2 282 28.7
MD17G1139600 Malus domestica HOM05D015330 ORTHO05D011736 3.1e-10 70.5 288 31.6
Sabra02G0048800 Salix brachista HOM05D019188 ORTHO05D011736 5.3e-10 69.7 253 28.9
GSVIVG01000788001 Vitis vinifera HOM05D015707 ORTHO05D011736 5.3e-10 69.7 288 29.2
LjContig00310g0023716 Lotus japonicus HOM05D016025 ORTHO05D015993 1.6e-09 68.2 176 36.4
Ciclev10033349m.g Citrus clementina HOM05D015707 ORTHO05D011736 2.6e-09 67.4 336 30.4
Gorai.007G069700 Gossypium raimondii HOM05D015707 ORTHO05D011736 1.3e-08 65.1 192 34.9
FAN09G0700 Fragaria x ananassa HOM05D000864 ORTHO05D011736 1.7e-08 64.7 55 61.8
Gohir.D11G064500 Gossypium hirsutum HOM05D015707 ORTHO05D011736 3.8e-08 63.5 192 34.9
CSS0007418 Camellia sinensis var. sinensis HOM05D021637 ORTHO05D023291 1.9e-07 61.2 162 31.5
Sabra05G0153200 Salix brachista HOM05D019188 ORTHO05D011736 2.5e-07 60.8 277 34.3
Dinv00978 Davidia involucrata HOM05D021637 ORTHO05D023291 2.1e-06 57.8 292 26.7


User provided reference genes

Program Settings